BLASTX nr result

ID: Glycyrrhiza24_contig00028030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028030
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594019.1| Mediator of DNA damage checkpoint protein [M...   100   2e-19
ref|XP_003541655.1| PREDICTED: uncharacterized protein LOC100778...    91   1e-16
ref|XP_003547218.1| PREDICTED: uncharacterized protein LOC100817...    82   5e-14

>ref|XP_003594019.1| Mediator of DNA damage checkpoint protein [Medicago truncatula]
           gi|355483067|gb|AES64270.1| Mediator of DNA damage
           checkpoint protein [Medicago truncatula]
          Length = 1155

 Score =  100 bits (248), Expect = 2e-19
 Identities = 60/116 (51%), Positives = 70/116 (60%), Gaps = 1/116 (0%)
 Frame = -1

Query: 346 QALDDFDTQLLDEGSESDGTQVLENXXXXXXXXXXXXDRQCSDSAQSTDREE-VPAQSTS 170
           Q  DDFDT+LL EG ESDGT+VLE+              QC DS  S DRE+ V      
Sbjct: 70  QKFDDFDTELLGEGYESDGTEVLEDVDDEGVDD-----HQCRDSGGSADREDDVNRSFNE 124

Query: 169 GHGDKKQTSSTSGSMPPRFTFLRAESMREAALANRNMTLKQTQYQTTSVVGTSQFC 2
              D+K TSS  GSMP RFTFLRAES+RE  LA R+M  K T+ Q  SV+G +QFC
Sbjct: 125 RSSDEKHTSS--GSMPLRFTFLRAESLREVGLAKRSMNSKHTEDQPNSVMGMNQFC 178


>ref|XP_003541655.1| PREDICTED: uncharacterized protein LOC100778695 [Glycine max]
          Length = 803

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 56/115 (48%), Positives = 66/115 (57%)
 Frame = -1

Query: 346 QALDDFDTQLLDEGSESDGTQVLENXXXXXXXXXXXXDRQCSDSAQSTDREEVPAQSTSG 167
           QALDD DTQLL+E S+SD TQVLEN                 D         V  ++   
Sbjct: 90  QALDDGDTQLLEEESDSDRTQVLENVD--------------DDDVDEVSVGNVNGEAVDS 135

Query: 166 HGDKKQTSSTSGSMPPRFTFLRAESMREAALANRNMTLKQTQYQTTSVVGTSQFC 2
              +    ++SGSMPPRFT LRAES+R+AALA  NM LK+TQ  T SV GTSQFC
Sbjct: 136 KKGESSQQNSSGSMPPRFTVLRAESLRQAALA-CNMDLKETQDVTNSVEGTSQFC 189


>ref|XP_003547218.1| PREDICTED: uncharacterized protein LOC100817763 [Glycine max]
          Length = 1147

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 56/120 (46%), Positives = 68/120 (56%), Gaps = 5/120 (4%)
 Frame = -1

Query: 346 QALDDFDTQLLDEGSESDGTQVLENXXXXXXXXXXXXDRQCSDSAQSTDREEVPAQSTSG 167
           QALDD DTQLL+E S+SD TQVLE                      + D +EV   + +G
Sbjct: 89  QALDDGDTQLLEEESDSDRTQVLE----------------------TVDDDEVSVDNVNG 126

Query: 166 HG-DKKQTSSTS----GSMPPRFTFLRAESMREAALANRNMTLKQTQYQTTSVVGTSQFC 2
              D K+  S+     GSMPPRF FL AES+R+AALA  +M LK+T   T SV GTSQFC
Sbjct: 127 EAADSKKVESSQQNSYGSMPPRFNFLHAESLRQAALA-CDMDLKETLDVTNSVKGTSQFC 185