BLASTX nr result

ID: Glycyrrhiza24_contig00028023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028023
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593708.1| Glutamate-gated kainate-type ion channel rec...   137   9e-31
ref|XP_003593706.1| Glutamate receptor 2.9 [Medicago truncatula]...   135   3e-30
ref|XP_003541714.1| PREDICTED: glutamate receptor 2.7-like [Glyc...   134   6e-30
ref|XP_003593705.1| Glutamate receptor 2.7 [Medicago truncatula]...   134   8e-30
ref|XP_003541713.1| PREDICTED: glutamate receptor 2.7-like [Glyc...   124   8e-27

>ref|XP_003593708.1| Glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Medicago truncatula] gi|355482756|gb|AES63959.1|
           Glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Medicago truncatula]
          Length = 635

 Score =  137 bits (345), Expect = 9e-31
 Identities = 68/89 (76%), Positives = 78/89 (87%)
 Frame = +2

Query: 2   IDVNSETGKQQRRAMQIAALSFNNYSKTQNISLFFRDSGRNPLQAASAAEELIAKKKVEV 181
           IDVNSE GK Q+ AMQIAA SFNNYS   NI LFFRDSG+NPLQAASAAE+LI K+KV+V
Sbjct: 45  IDVNSEIGKNQKTAMQIAAQSFNNYSNNHNIILFFRDSGKNPLQAASAAEDLITKEKVKV 104

Query: 182 IIGIETWQEAALVADLGSKAQVPTISFSA 268
           IIG+ETWQEAA+VAD G+K Q+PTISFS+
Sbjct: 105 IIGMETWQEAAIVADFGAKFQIPTISFSS 133


>ref|XP_003593706.1| Glutamate receptor 2.9 [Medicago truncatula]
           gi|355482754|gb|AES63957.1| Glutamate receptor 2.9
           [Medicago truncatula]
          Length = 947

 Score =  135 bits (341), Expect = 3e-30
 Identities = 69/89 (77%), Positives = 78/89 (87%)
 Frame = +2

Query: 2   IDVNSETGKQQRRAMQIAALSFNNYSKTQNISLFFRDSGRNPLQAASAAEELIAKKKVEV 181
           IDVNSE GKQQR AMQIAA SFNNYS TQ I+L F DSGRNPLQ+AS AEELI K+KV+V
Sbjct: 44  IDVNSERGKQQRTAMQIAAQSFNNYSNTQTITLLFCDSGRNPLQSASTAEELITKEKVKV 103

Query: 182 IIGIETWQEAALVADLGSKAQVPTISFSA 268
           IIG+ETWQEAA+VAD+G+  QVPTISFS+
Sbjct: 104 IIGMETWQEAAIVADVGAMFQVPTISFSS 132


>ref|XP_003541714.1| PREDICTED: glutamate receptor 2.7-like [Glycine max]
          Length = 914

 Score =  134 bits (338), Expect = 6e-30
 Identities = 69/89 (77%), Positives = 78/89 (87%)
 Frame = +2

Query: 2   IDVNSETGKQQRRAMQIAALSFNNYSKTQNISLFFRDSGRNPLQAASAAEELIAKKKVEV 181
           IDVNS  GKQQRRAMQIA+ SFNNYSK  NI+LFF +SG  PLQAASAAEELI KKKV+V
Sbjct: 45  IDVNSVAGKQQRRAMQIASQSFNNYSKNHNINLFFSNSGGIPLQAASAAEELIMKKKVKV 104

Query: 182 IIGIETWQEAALVADLGSKAQVPTISFSA 268
           I+G+ TWQEAALVADLG+KAQ+P ISFS+
Sbjct: 105 IVGMGTWQEAALVADLGNKAQIPIISFSS 133


>ref|XP_003593705.1| Glutamate receptor 2.7 [Medicago truncatula]
           gi|355482753|gb|AES63956.1| Glutamate receptor 2.7
           [Medicago truncatula]
          Length = 939

 Score =  134 bits (337), Expect = 8e-30
 Identities = 68/89 (76%), Positives = 76/89 (85%)
 Frame = +2

Query: 2   IDVNSETGKQQRRAMQIAALSFNNYSKTQNISLFFRDSGRNPLQAASAAEELIAKKKVEV 181
           IDVNSETGKQQR AMQIAA SFNNYS   NI L FRDSGRNPL AAS AEELI K+KV+V
Sbjct: 43  IDVNSETGKQQRTAMQIAAQSFNNYSHNHNIILLFRDSGRNPLHAASTAEELITKEKVKV 102

Query: 182 IIGIETWQEAALVADLGSKAQVPTISFSA 268
           IIG ETWQEA+++AD+G+  QVPTISFS+
Sbjct: 103 IIGTETWQEASIMADVGAMFQVPTISFSS 131


>ref|XP_003541713.1| PREDICTED: glutamate receptor 2.7-like [Glycine max]
          Length = 926

 Score =  124 bits (311), Expect = 8e-27
 Identities = 66/90 (73%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
 Frame = +2

Query: 2   IDVNSETGKQQRRAMQIAALSFNNYSKTQN-ISLFFRDSGRNPLQAASAAEELIAKKKVE 178
           ID NSE GKQQ+RAM IAA +FNN SK  N I LFF DSG  PLQAASAAEELI KKKV+
Sbjct: 48  IDANSEVGKQQKRAMHIAAQTFNNNSKNHNNIILFFHDSGGIPLQAASAAEELIMKKKVK 107

Query: 179 VIIGIETWQEAALVADLGSKAQVPTISFSA 268
           VI+G+ TWQEAAL ADLG+KAQ+P ISFS+
Sbjct: 108 VIVGMGTWQEAALAADLGNKAQIPIISFSS 137


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