BLASTX nr result

ID: Glycyrrhiza24_contig00028011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028011
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540701.1| PREDICTED: uncharacterized protein LOC100800...   156   2e-36
ref|XP_003597511.1| hypothetical protein MTR_2g098830 [Medicago ...   137   1e-30
emb|CBI36653.3| unnamed protein product [Vitis vinifera]              107   1e-21
gb|AAF80120.1|AC024174_2 Contains similarity to an unknown prote...    84   2e-14
ref|NP_172086.2| uncharacterized protein [Arabidopsis thaliana] ...    84   2e-14

>ref|XP_003540701.1| PREDICTED: uncharacterized protein LOC100800099 [Glycine max]
          Length = 677

 Score =  156 bits (394), Expect = 2e-36
 Identities = 76/115 (66%), Positives = 89/115 (77%)
 Frame = +3

Query: 3   RKIEEEIAICDKKIQRLSKGDVEDNFELKIESIVDGCNDIWVSNQERMCGQQSFPLEKKK 182
           RKIE+EIA+CDKKIQR+   D EDNF+LKIESI++GCN  WV NQER   QQS P E+KK
Sbjct: 535 RKIEDEIAVCDKKIQRMLT-DGEDNFKLKIESIIEGCNGTWVRNQERTSEQQSLPFERKK 593

Query: 183 LSEAVFIRLSPCQELDGVCHENNWVLPTYHLSQSDGGFQANVTVNGVGFRCSLAG 347
           LSEAVF+  SP QELD +  EN WVLPTYHLS ++GGF+ANV V G  F+CS  G
Sbjct: 594 LSEAVFLTQSPFQELDNIFRENYWVLPTYHLSHANGGFKANVIVKGEDFQCSFEG 648


>ref|XP_003597511.1| hypothetical protein MTR_2g098830 [Medicago truncatula]
            gi|355486559|gb|AES67762.1| hypothetical protein
            MTR_2g098830 [Medicago truncatula]
          Length = 1588

 Score =  137 bits (344), Expect = 1e-30
 Identities = 67/124 (54%), Positives = 86/124 (69%), Gaps = 6/124 (4%)
 Frame = +3

Query: 3    RKIEEEIAICDKKIQRLSKGDVEDNFELKIESIVDGCNDIWVSNQERMCGQ----QSFP- 167
            R IE+E+A+C+ KI R   G+ ED+FELK+ES+++GCN  W+ NQ RMC Q    Q  P 
Sbjct: 1444 RAIEDEMAVCNMKIHRWLAGE-EDDFELKLESVIEGCNGTWLRNQGRMCSQYLDDQCLPQ 1502

Query: 168  -LEKKKLSEAVFIRLSPCQELDGVCHENNWVLPTYHLSQSDGGFQANVTVNGVGFRCSLA 344
             ++ K+L+EAV    SPCQELDG+CHENNW+LPTY +S SDG F A V V GV F  S  
Sbjct: 1503 SVKSKRLTEAVLTLHSPCQELDGICHENNWILPTYSVSLSDGEFHATVRVKGVDFEYSCE 1562

Query: 345  GSVC 356
            G+ C
Sbjct: 1563 GNTC 1566


>emb|CBI36653.3| unnamed protein product [Vitis vinifera]
          Length = 691

 Score =  107 bits (267), Expect = 1e-21
 Identities = 57/123 (46%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
 Frame = +3

Query: 3   RKIEEEIAICDKKIQRLSKGDVEDNFELKIESIVDGCNDIWVSNQERM---CGQQSFP-- 167
           RK+E+EIA CDK IQ +  G  ED+  LKIESI++ CND     ++R       Q  P  
Sbjct: 541 RKLEDEIAQCDKNIQTILDGG-EDDLALKIESILEFCNDACPQTRDRTYRHLEDQESPQH 599

Query: 168 LEKKKLSEAVFIRLSPCQELDGVCHENNWVLPTYHLSQSDGGFQANVTVNGVGFRCSLAG 347
           +++K+LSEA+      CQELDG+C+ENNW+LPTY +S  DG  +  V+V GV F  S+ G
Sbjct: 600 IKRKRLSEAILNIQKSCQELDGICYENNWILPTYRVSLLDGKSEGTVSVKGVDFEISVVG 659

Query: 348 SVC 356
             C
Sbjct: 660 EPC 662


>gb|AAF80120.1|AC024174_2 Contains similarity to an unknown protein T11A7.7 gi|2335096 from
            Arabidopsis thaliana BAC T11A7 gb|AC002339 and contains a
            tropomyosin PF|00261 domain. ESTs gb|AI995205, gb|N37925,
            gb|F13889, gb|AV523107, gb|AV535948, gb|AV558461,
            gb|F13888 come from this gene [Arabidopsis thaliana]
          Length = 1628

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 47/117 (40%), Positives = 70/117 (59%), Gaps = 2/117 (1%)
 Frame = +3

Query: 3    RKIEEEIAICDKKIQRLSKGDVEDNFELKIESIVDGCNDIWVSN--QERMCGQQSFPLEK 176
            R IE+EIA CDK IQ + KGD    +EL++E++++ CN+ +     QE +        ++
Sbjct: 1487 RNIEDEIAKCDKCIQNI-KGD----WELQLETVLECCNETYPRRNLQESLDKSACQSNKR 1541

Query: 177  KKLSEAVFIRLSPCQELDGVCHENNWVLPTYHLSQSDGGFQANVTVNGVGFRCSLAG 347
             KLSE +    S CQ LD +C  NNWVLP Y ++ SDGG++A V + G    C++ G
Sbjct: 1542 LKLSETLPSTKSLCQRLDDICLMNNWVLPNYRVAPSDGGYEAEVRITGNHVACTIHG 1598


>ref|NP_172086.2| uncharacterized protein [Arabidopsis thaliana]
           gi|332189801|gb|AEE27922.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 627

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 47/117 (40%), Positives = 70/117 (59%), Gaps = 2/117 (1%)
 Frame = +3

Query: 3   RKIEEEIAICDKKIQRLSKGDVEDNFELKIESIVDGCNDIWVSN--QERMCGQQSFPLEK 176
           R IE+EIA CDK IQ + KGD    +EL++E++++ CN+ +     QE +        ++
Sbjct: 486 RNIEDEIAKCDKCIQNI-KGD----WELQLETVLECCNETYPRRNLQESLDKSACQSNKR 540

Query: 177 KKLSEAVFIRLSPCQELDGVCHENNWVLPTYHLSQSDGGFQANVTVNGVGFRCSLAG 347
            KLSE +    S CQ LD +C  NNWVLP Y ++ SDGG++A V + G    C++ G
Sbjct: 541 LKLSETLPSTKSLCQRLDDICLMNNWVLPNYRVAPSDGGYEAEVRITGNHVACTIHG 597


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