BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028009
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s...   367   1e-99
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   298   5e-79
emb|CBI16226.3| unnamed protein product [Vitis vinifera]              291   1e-76
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   291   1e-76
ref|XP_003606551.1| DNA-directed RNA polymerase [Medicago trunca...   285   4e-75

>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
            max]
          Length = 1391

 Score =  367 bits (942), Expect = 1e-99
 Identities = 190/219 (86%), Positives = 204/219 (93%)
 Frame = -3

Query: 657  PIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKISTPIITAILES 478
            P+GA GAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPR+KEI+NG KKISTPIITAILE 
Sbjct: 1043 PVGATGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRVKEIMNGNKKISTPIITAILER 1102

Query: 477  DDNAKTARIVKGRIEKTNLGQVAKSIKVVMSSRSASIVITLDMERIQDAHLNIDANIVKE 298
            DDNA TARIVKGRIEKTNLGQVAKSIKVVM+SRSAS+VITLDM+RIQDAHLNIDANIVKE
Sbjct: 1103 DDNANTARIVKGRIEKTNLGQVAKSIKVVMTSRSASVVITLDMKRIQDAHLNIDANIVKE 1162

Query: 297  SILQTKKIKLKPEHIKILDIKKLEVVPQVVDRSKIHFQLNYLKNLLPSVAVKGIATAERV 118
            SIL+TKK KLKPEHIKILDIKKLEVVPQ VDRSKIHFQL+YLKNLLP+V VKGI T +RV
Sbjct: 1163 SILRTKKTKLKPEHIKILDIKKLEVVPQDVDRSKIHFQLHYLKNLLPTVVVKGIKTVDRV 1222

Query: 117  VLSKDEDKVTRVEKFKLLVEGTGLREVMGVEGVDGRKTV 1
            V+SKD    T+ EKF+LLVEGTG REVMGVEG+DGRKTV
Sbjct: 1223 VISKD----TKAEKFRLLVEGTGFREVMGVEGIDGRKTV 1257


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
            sativus]
          Length = 1400

 Score =  298 bits (764), Expect = 5e-79
 Identities = 151/217 (69%), Positives = 178/217 (82%)
 Frame = -3

Query: 654  IGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKISTPIITAILESD 475
            IGAIGA SIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAK+ISTPI+TA L  D
Sbjct: 1049 IGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALTHD 1108

Query: 474  DNAKTARIVKGRIEKTNLGQVAKSIKVVMSSRSASIVITLDMERIQDAHLNIDANIVKES 295
            DN   AR+VK RIEKTNLGQ+AK I++VMSSRSA I I LDME+I+DA L +DAN+VK++
Sbjct: 1109 DNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQA 1168

Query: 294  ILQTKKIKLKPEHIKILDIKKLEVVPQVVDRSKIHFQLNYLKNLLPSVAVKGIATAERVV 115
            IL T K+KLK EHI +LD +KL V+PQ  DR+K+HF L++LKN+LP V VKGI T  R V
Sbjct: 1169 ILVTPKLKLKHEHINVLDDRKLRVLPQDADRNKLHFNLHFLKNMLPGVVVKGIKTVGRAV 1228

Query: 114  LSKDEDKVTRVEKFKLLVEGTGLREVMGVEGVDGRKT 4
            + +++DK    +KF LLVEGTGL+ VMG EGVDG  T
Sbjct: 1229 IKEEKDKARNAKKFSLLVEGTGLQAVMGTEGVDGCNT 1265


>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  291 bits (744), Expect = 1e-76
 Identities = 157/217 (72%), Positives = 184/217 (84%)
 Frame = -3

Query: 654  IGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKISTPIITAILESD 475
            IGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAK+ISTPIITA LE +
Sbjct: 1474 IGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITAALECN 1533

Query: 474  DNAKTARIVKGRIEKTNLGQVAKSIKVVMSSRSASIVITLDMERIQDAHLNIDANIVKES 295
            +N KTAR+VKGRIE+T LGQVAKSIK+V++SR A I + LDME IQ + L+ID+NIV+ES
Sbjct: 1534 NNVKTARMVKGRIERTTLGQVAKSIKIVLTSRLALIAVALDMEGIQASQLSIDSNIVRES 1593

Query: 294  ILQTKKIKLKPEHIKILDIKKLEVVPQVVDRSKIHFQLNYLKNLLPSVAVKGIATAERVV 115
            IL+ ++IKLK +HIK+LD  KLEV PQ  DRS IHF+L+ LKNLLP+V VKGI T ER V
Sbjct: 1594 ILRNRRIKLKQQHIKVLDAGKLEVHPQ-GDRSTIHFELHALKNLLPTVVVKGIETVERAV 1652

Query: 114  LSKDEDKVTRVEKFKLLVEGTGLREVMGVEGVDGRKT 4
            ++KD +KV    K+ LLVEGTGL+ VMG EGV GR+T
Sbjct: 1653 INKD-NKV----KYNLLVEGTGLQTVMGTEGVIGRET 1684


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score =  291 bits (744), Expect = 1e-76
 Identities = 157/217 (72%), Positives = 184/217 (84%)
 Frame = -3

Query: 654  IGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKISTPIITAILESD 475
            IGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAK+ISTPIITA LE +
Sbjct: 1038 IGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITAALECN 1097

Query: 474  DNAKTARIVKGRIEKTNLGQVAKSIKVVMSSRSASIVITLDMERIQDAHLNIDANIVKES 295
            +N KTAR+VKGRIE+T LGQVAKSIK+V++SR A I + LDME IQ + L+ID+NIV+ES
Sbjct: 1098 NNVKTARMVKGRIERTTLGQVAKSIKIVLTSRLALIAVALDMEGIQASQLSIDSNIVRES 1157

Query: 294  ILQTKKIKLKPEHIKILDIKKLEVVPQVVDRSKIHFQLNYLKNLLPSVAVKGIATAERVV 115
            IL+ ++IKLK +HIK+LD  KLEV PQ  DRS IHF+L+ LKNLLP+V VKGI T ER V
Sbjct: 1158 ILRNRRIKLKQQHIKVLDAGKLEVHPQ-GDRSTIHFELHALKNLLPTVVVKGIETVERAV 1216

Query: 114  LSKDEDKVTRVEKFKLLVEGTGLREVMGVEGVDGRKT 4
            ++KD +KV    K+ LLVEGTGL+ VMG EGV GR+T
Sbjct: 1217 INKD-NKV----KYNLLVEGTGLQTVMGTEGVIGRET 1248


>ref|XP_003606551.1| DNA-directed RNA polymerase [Medicago truncatula]
           gi|355507606|gb|AES88748.1| DNA-directed RNA polymerase
           [Medicago truncatula]
          Length = 550

 Score =  285 bits (730), Expect = 4e-75
 Identities = 163/253 (64%), Positives = 186/253 (73%), Gaps = 34/253 (13%)
 Frame = -3

Query: 657 PIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKISTPIITAILES 478
           PIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI EIINGA  I TPIITAILE 
Sbjct: 163 PIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIIEIINGASNIKTPIITAILER 222

Query: 477 DDNAKTARIVKGRIEKTNLGQVAKSIKVVMSSRSASIVITLDMERIQDAHLNIDANIVKE 298
           DDNAKTA+IVKG IEKTNLGQVAKSIKVV S++ A++ I+LDM  I+ A LNIDANIVKE
Sbjct: 223 DDNAKTAKIVKGCIEKTNLGQVAKSIKVVYSNKLAAVFISLDMGIIEKAGLNIDANIVKE 282

Query: 297 SILQTKKIKLKPEHIKILDIKKLEVVPQVVDRSKIHFQLNYLKNLLPSVAVKGIATAERV 118
           SILQT K+KLKPE++KILDIKKL+V PQ   RS++ FQLN LKNLLPSV VKG+ T ER 
Sbjct: 283 SILQTGKLKLKPENVKILDIKKLQVEPQGSSRSELLFQLNNLKNLLPSVVVKGVKTVERT 342

Query: 117 VL---------SKDEDKVT-------------RVEKFKLLVEGT------------GLRE 40
           VL          K+ +K T              V + ++++ G             GL+E
Sbjct: 343 VLEIKKIKTNSGKESEKYTLLGMSVAPKECSRSVLRRRMILTGNIIVASSLVLLNKGLKE 402

Query: 39  VMGVEGVDGRKTV 1
           VMG+EGVDG KTV
Sbjct: 403 VMGIEGVDGHKTV 415