BLASTX nr result

ID: Glycyrrhiza24_contig00028005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028005
         (844 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41290.1| unknown [Lotus japonicus]                              172   1e-40
ref|XP_003524469.1| PREDICTED: uncharacterized protein LOC100784...   107   4e-21
gb|AFK49313.1| unknown [Medicago truncatula]                          105   2e-20
gb|ABK93232.1| unknown [Populus trichocarpa]                          103   6e-20
ref|XP_002321717.1| predicted protein [Populus trichocarpa] gi|2...   100   4e-19

>gb|AFK41290.1| unknown [Lotus japonicus]
          Length = 164

 Score =  172 bits (435), Expect = 1e-40
 Identities = 108/228 (47%), Positives = 131/228 (57%)
 Frame = +1

Query: 55  MDPTQIKKIQAMNRYKRRQFLDNLYFYSFTAIACSVFCCVTLCLPYLFSLLRVFFLVHMP 234
           MDPTQIKKIQAMNRYKRRQ LDNLYFYSFTA+ACSVFCCVTLCLPYL S+++VFF+V+M 
Sbjct: 1   MDPTQIKKIQAMNRYKRRQVLDNLYFYSFTALACSVFCCVTLCLPYLASMVQVFFMVYMS 60

Query: 235 NLIIPILLSSKHLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVYYDEYIQSKQITTKPH 414
           +L                                               IQS Q     H
Sbjct: 61  SL-----------------------------------------------IQSSQ----TH 69

Query: 415 HQIPIPDHEVNKAVTLFEKHVGENHMDMMTGEEYGINSLELKSKAWRIKKSTETCPAAKE 594
                P   VNKA +   KHV E+ + M  G+E  +N+L+LK++ W            K 
Sbjct: 70  MPQINPTFVVNKAKSFENKHVVES-VAMAVGDE--LNNLDLKARVW----------VNKA 116

Query: 595 KEDYLDEGEEQSNLVASSDELNRRADDFIARVNRQRKIELSLLQCGSY 738
           KE+   +GEE+ +  +S DELNRRA+DFIARVNRQRK+ELSLLQ GSY
Sbjct: 117 KEEDNSDGEEEQSFHSSYDELNRRAEDFIARVNRQRKLELSLLQHGSY 164


>ref|XP_003524469.1| PREDICTED: uncharacterized protein LOC100784047 [Glycine max]
          Length = 239

 Score =  107 bits (266), Expect = 4e-21
 Identities = 68/125 (54%), Positives = 85/125 (68%)
 Frame = +1

Query: 364 VYYDEYIQSKQITTKPHHQIPIPDHEVNKAVTLFEKHVGENHMDMMTGEEYGINSLELKS 543
           VYYDEYIQS Q T KP  QIP P  EVN++ TL EKHVGEN           +NS++ K 
Sbjct: 134 VYYDEYIQSCQ-TMKP--QIPSP--EVNESKTLLEKHVGENE---------DVNSVDFKG 179

Query: 544 KAWRIKKSTETCPAAKEKEDYLDEGEEQSNLVASSDELNRRADDFIARVNRQRKIELSLL 723
           K W I+K+TE      ++E+ LD G +QS + +SS ELN+RADDF+ARVNRQR++ELSLL
Sbjct: 180 K-WGIEKATEE----SKEEENLDGGYKQSLIPSSSYELNKRADDFVARVNRQRRLELSLL 234

Query: 724 QCGSY 738
              SY
Sbjct: 235 HYDSY 239


>gb|AFK49313.1| unknown [Medicago truncatula]
          Length = 132

 Score =  105 bits (261), Expect = 2e-20
 Identities = 73/127 (57%), Positives = 85/127 (66%), Gaps = 1/127 (0%)
 Frame = +1

Query: 361 DVYYDEYIQSKQITTKPHHQIPIPDHEVNKAVTLFEKHVGENHMDMMTGEEYGINSLELK 540
           DVY DEYIQS   TTKP     I   EVNK  T FEKHV EN M++   +  G N++ LK
Sbjct: 16  DVYLDEYIQSSH-TTKPQ----IQSFEVNKTKT-FEKHVEENIMNIFE-KHVGHNTITLK 68

Query: 541 SKAWRIKKSTETCPAAKEKEDYLDEGEEQSNLVA-SSDELNRRADDFIARVNRQRKIELS 717
              W IK++T+T   AKE  D LDEG+EQSN VA  SDEL+RRA+DFIARVNR  K+ELS
Sbjct: 69  RNVW-IKETTKTW-GAKEDGD-LDEGDEQSNSVAFRSDELSRRAEDFIARVNRHTKLELS 125

Query: 718 LLQCGSY 738
            LQ G Y
Sbjct: 126 RLQNGCY 132


>gb|ABK93232.1| unknown [Populus trichocarpa]
          Length = 203

 Score =  103 bits (256), Expect = 6e-20
 Identities = 77/227 (33%), Positives = 105/227 (46%)
 Frame = +1

Query: 55  MDPTQIKKIQAMNRYKRRQFLDNLYFYSFTAIACSVFCCVTLCLPYLFSLLRVFFLVHMP 234
           MD  ++++I A+N+ K+ Q LDN + YSFT ++C++FC      P LF  +++F  V +P
Sbjct: 1   MDLIKLREIHAINKSKKHQLLDNFFLYSFTVLSCTLFCSSPFWFPSLFHSMKLFLFVSLP 60

Query: 235 NLIIPILLSSKHLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVYYDEYIQSKQITTKPH 414
            L   ILLS K +F                            DVYYDEYI  K+      
Sbjct: 61  KL-SSILLSPKFIF---IVGNLIIFVLVGESKYFTSNSPSATDVYYDEYIDQKKSL---- 112

Query: 415 HQIPIPDHEVNKAVTLFEKHVGENHMDMMTGEEYGINSLELKSKAWRIKKSTETCPAAKE 594
            Q      E  K V + E    +      +GE  G   L                   KE
Sbjct: 113 -QTTSASVEEKKEVKMEESFKEKQSKTCESGENNGGKGL-----------CEGNLKVHKE 160

Query: 595 KEDYLDEGEEQSNLVASSDELNRRADDFIARVNRQRKIELSLLQCGS 735
           +ED   EGEE+ +L   ++EL +RADDFIARVNRQR +E  LL C S
Sbjct: 161 REDL--EGEEEFSL--PTEELKKRADDFIARVNRQRMLEARLLVCYS 203


>ref|XP_002321717.1| predicted protein [Populus trichocarpa] gi|222868713|gb|EEF05844.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score =  100 bits (249), Expect = 4e-19
 Identities = 76/227 (33%), Positives = 104/227 (45%)
 Frame = +1

Query: 55  MDPTQIKKIQAMNRYKRRQFLDNLYFYSFTAIACSVFCCVTLCLPYLFSLLRVFFLVHMP 234
           MD  ++++I A+N+ K+ Q LDN + YSFT ++C++FC      P LF  +++F  V +P
Sbjct: 1   MDLIKLREIHAINKSKKHQLLDNFFLYSFTVLSCTLFCSSPFWFPSLFHSMKLFLFVSLP 60

Query: 235 NLIIPILLSSKHLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVYYDEYIQSKQITTKPH 414
            L   ILLS K +F                             VYYDEYI  K+      
Sbjct: 61  KL-SSILLSPKFIFIVGNLIIFVLVGESKYFTSNSPSATA---VYYDEYIDQKKSL---- 112

Query: 415 HQIPIPDHEVNKAVTLFEKHVGENHMDMMTGEEYGINSLELKSKAWRIKKSTETCPAAKE 594
            Q      E  K V + E    +      +GE  G   L                   KE
Sbjct: 113 -QTTSASVEEKKEVKMEESFKEKQSKTCESGENNGGKGL-----------CEGNLKVHKE 160

Query: 595 KEDYLDEGEEQSNLVASSDELNRRADDFIARVNRQRKIELSLLQCGS 735
           +ED   EGEE+ +L   ++EL +RADDFIARVNRQR +E  LL C S
Sbjct: 161 REDL--EGEEEFSL--PTEELKKRADDFIARVNRQRMLEARLLVCYS 203


Top