BLASTX nr result

ID: Glycyrrhiza24_contig00027990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027990
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519207.1| PREDICTED: rhamnogalacturonate lyase B-like ...   222   3e-56
ref|XP_003615341.1| LG27/30-like gene [Medicago truncatula] gi|3...   218   5e-55
ref|XP_003523772.1| PREDICTED: rhamnogalacturonate lyase B-like ...   176   2e-42
ref|XP_002527357.1| lyase, putative [Ricinus communis] gi|223533...   175   4e-42
ref|XP_002301115.1| predicted protein [Populus trichocarpa] gi|2...   175   4e-42

>ref|XP_003519207.1| PREDICTED: rhamnogalacturonate lyase B-like [Glycine max]
          Length = 651

 Score =  222 bits (565), Expect = 3e-56
 Identities = 108/122 (88%), Positives = 115/122 (94%)
 Frame = +1

Query: 1   DDGSYQGTTWQIKFNLDNVEASGIYKLRLALASANVSELQVRVNDLKQDPPLFTTGVIGK 180
           +DGSYQGTTWQIKFNLD+VEAS IY+LRLALASAN+SELQVRVND KQDPPLFTTGVIGK
Sbjct: 524 EDGSYQGTTWQIKFNLDDVEASNIYRLRLALASANISELQVRVNDPKQDPPLFTTGVIGK 583

Query: 181 DNAIARHGIHGLYWLFNIDVPGVLLLEGDNTIFLTQTMASGPLALFQGIMYDYIRLECPN 360
           DNAIARHGIHGLYWLF+IDVPG+LL +  N IFLTQTMASGPLALFQGIMYDYIRLE PN
Sbjct: 584 DNAIARHGIHGLYWLFSIDVPGLLLEKSVNIIFLTQTMASGPLALFQGIMYDYIRLEGPN 643

Query: 361 PF 366
           PF
Sbjct: 644 PF 645


>ref|XP_003615341.1| LG27/30-like gene [Medicago truncatula] gi|355516676|gb|AES98299.1|
           LG27/30-like gene [Medicago truncatula]
          Length = 661

 Score =  218 bits (554), Expect = 5e-55
 Identities = 103/119 (86%), Positives = 113/119 (94%)
 Frame = +1

Query: 1   DDGSYQGTTWQIKFNLDNVEASGIYKLRLALASANVSELQVRVNDLKQDPPLFTTGVIGK 180
           +DGSYQGTTWQIKFN+D+V+ +G+YKLRLALASANVSELQVRVND KQDPPLFTTGVIGK
Sbjct: 542 NDGSYQGTTWQIKFNMDDVQENGLYKLRLALASANVSELQVRVNDEKQDPPLFTTGVIGK 601

Query: 181 DNAIARHGIHGLYWLFNIDVPGVLLLEGDNTIFLTQTMASGPLALFQGIMYDYIRLECP 357
           DNAIARHGIHGLYWLFNI VP +LL++GDNTIFLTQTMA+GPL LFQGIMYDYIRLE P
Sbjct: 602 DNAIARHGIHGLYWLFNIGVPSILLIKGDNTIFLTQTMATGPLPLFQGIMYDYIRLESP 660


>ref|XP_003523772.1| PREDICTED: rhamnogalacturonate lyase B-like [Glycine max]
          Length = 643

 Score =  176 bits (445), Expect = 2e-42
 Identities = 85/119 (71%), Positives = 99/119 (83%)
 Frame = +1

Query: 1   DDGSYQGTTWQIKFNLDNVEASGIYKLRLALASANVSELQVRVNDLKQDPPLFTTGVIGK 180
           DD +YQGTTWQIKF LDNV  S  YKLR+ALASA +SELQVRVN+ K   PLF++G+IG+
Sbjct: 519 DDNTYQGTTWQIKFKLDNVNKSSSYKLRVALASAALSELQVRVNNPKAPRPLFSSGLIGR 578

Query: 181 DNAIARHGIHGLYWLFNIDVPGVLLLEGDNTIFLTQTMASGPLALFQGIMYDYIRLECP 357
           DN+IARHGIHGLYWL+N+D+PG  L+EGDNTIFLTQT  +GP   FQ IMYDYIRLE P
Sbjct: 579 DNSIARHGIHGLYWLYNVDMPGTQLVEGDNTIFLTQTRGNGP---FQAIMYDYIRLEGP 634


>ref|XP_002527357.1| lyase, putative [Ricinus communis] gi|223533276|gb|EEF35029.1|
           lyase, putative [Ricinus communis]
          Length = 639

 Score =  175 bits (443), Expect = 4e-42
 Identities = 85/119 (71%), Positives = 101/119 (84%)
 Frame = +1

Query: 1   DDGSYQGTTWQIKFNLDNVEASGIYKLRLALASANVSELQVRVNDLKQDPPLFTTGVIGK 180
           DDG YQGTTWQIKF LD+++ SG YKLRLALA+ANV+ELQVR+ND K D P FTTG IG 
Sbjct: 519 DDGIYQGTTWQIKFELDSLDQSGTYKLRLALATANVAELQVRINDGKADSPQFTTGEIGH 578

Query: 181 DNAIARHGIHGLYWLFNIDVPGVLLLEGDNTIFLTQTMASGPLALFQGIMYDYIRLECP 357
           DN IARHGIHGLY L+++DVPG  L+EG+N+IFLTQT+++GP+   QGIMYDYIRLE P
Sbjct: 579 DNTIARHGIHGLYRLYSVDVPGTQLVEGENSIFLTQTISTGPV---QGIMYDYIRLEGP 634


>ref|XP_002301115.1| predicted protein [Populus trichocarpa] gi|222842841|gb|EEE80388.1|
           predicted protein [Populus trichocarpa]
          Length = 731

 Score =  175 bits (443), Expect = 4e-42
 Identities = 88/119 (73%), Positives = 100/119 (84%)
 Frame = +1

Query: 1   DDGSYQGTTWQIKFNLDNVEASGIYKLRLALASANVSELQVRVNDLKQDPPLFTTGVIGK 180
           DD SYQGTTWQIKF LDNV+ SG YKLRLALA+ANV+ELQVR+N L+ +P  ++TGVIG 
Sbjct: 611 DDNSYQGTTWQIKFKLDNVQNSGSYKLRLALATANVAELQVRINSLETNP--WSTGVIGH 668

Query: 181 DNAIARHGIHGLYWLFNIDVPGVLLLEGDNTIFLTQTMASGPLALFQGIMYDYIRLECP 357
           DN I RHGIHGLYWL+NI+VPG  L+E DNTIFLTQTMA+ P   FQGIMYDYIRLE P
Sbjct: 669 DNTIMRHGIHGLYWLYNIEVPGSELVEEDNTIFLTQTMATSP---FQGIMYDYIRLEGP 724


Top