BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027980
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621545.1| Pentatricopeptide repeat-containing protein ...   286   9e-76
ref|XP_003539071.1| PREDICTED: pentatricopeptide repeat-containi...   272   2e-71
ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containi...   259   2e-67
ref|XP_002874971.1| pentatricopeptide repeat-containing protein ...   244   7e-63
ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containi...   243   1e-62

>ref|XP_003621545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87241489|gb|ABD33347.1| Pentatricopeptide repeat
           [Medicago truncatula] gi|355496560|gb|AES77763.1|
           Pentatricopeptide repeat-containing protein [Medicago
           truncatula]
          Length = 791

 Score =  286 bits (733), Expect = 9e-76
 Identities = 131/170 (77%), Positives = 156/170 (91%)
 Frame = +1

Query: 1   LISVLCRLGKVTDALIVWEELKGCGFEPDEFTYTTLIQGCSRTFRIDEAIRIFHDMQNNG 180
           ++SVLC++GK+ DALIVW+ELKGCG+EPDEFTYT L++GC RT+R+D A+RIF++M++NG
Sbjct: 281 VLSVLCKVGKINDALIVWDELKGCGYEPDEFTYTILVRGCCRTYRMDVALRIFNEMKDNG 340

Query: 181 FRPGTLVYNSLLCGLFKATKVNEACQLFEKMAQEGAKASCSTYNILVHGLIRNGRPEAAY 360
           FRPG LVYN +L GLFKA KVNE CQ+FEKMAQEG KASCSTYNIL+HGLI+NGR EA Y
Sbjct: 341 FRPGVLVYNCVLDGLFKAAKVNEGCQMFEKMAQEGVKASCSTYNILIHGLIKNGRSEAGY 400

Query: 361 TLFCDLKKKGQFVDGVTYSIIVLQLCKEGQLEEALQLVEEMESRGFAVDL 510
            LFCDLKKKGQFVDG+TYSI+VLQLCKEG LEEAL+LVEEME+RGF+VDL
Sbjct: 401 MLFCDLKKKGQFVDGITYSIVVLQLCKEGLLEEALELVEEMEARGFSVDL 450



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/126 (27%), Positives = 67/126 (53%)
 Frame = +1

Query: 133 RIDEAIRIFHDMQNNGFRPGTLVYNSLLCGLFKATKVNEACQLFEKMAQEGAKASCSTYN 312
           ++  A ++F    + G  P +  YNS++    K    NEA  +  +M ++      +TYN
Sbjct: 600 KLSLACKLFEIFTDAGVDPVSYTYNSIMSSFVKKGYFNEAWAILSEMGEKLCPTDIATYN 659

Query: 313 ILVHGLIRNGRPEAAYTLFCDLKKKGQFVDGVTYSIIVLQLCKEGQLEEALQLVEEMESR 492
           +++ GL + GR + A  +   L K+G ++D V Y+ ++  L K G+++E  +  E+M+S 
Sbjct: 660 MIIQGLGKMGRADLASAVLDGLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSS 719

Query: 493 GFAVDL 510
           G   D+
Sbjct: 720 GINPDV 725



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 39/164 (23%), Positives = 76/164 (46%)
 Frame = +1

Query: 4    ISVLCRLGKVTDALIVWEELKGCGFEPDEFTYTTLIQGCSRTFRIDEAIRIFHDMQNNGF 183
            +S+    GK++ A  ++E     G +P  +TY +++    +    +EA  I  +M     
Sbjct: 592  LSIFLSKGKLSLACKLFEIFTDAGVDPVSYTYNSIMSSFVKKGYFNEAWAILSEMGEKLC 651

Query: 184  RPGTLVYNSLLCGLFKATKVNEACQLFEKMAQEGAKASCSTYNILVHGLIRNGRPEAAYT 363
                  YN ++ GL K  + + A  + + + ++G       YN L++ L + GR +    
Sbjct: 652  PTDIATYNMIIQGLGKMGRADLASAVLDGLLKQGGYLDIVMYNTLINALGKAGRIDEVNK 711

Query: 364  LFCDLKKKGQFVDGVTYSIIVLQLCKEGQLEEALQLVEEMESRG 495
             F  +K  G   D VTY+ ++    K G+L++A + ++ M   G
Sbjct: 712  FFEQMKSSGINPDVVTYNTLIEIHSKAGRLKDAYKFLKMMIDAG 755



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
 Frame = +1

Query: 76  FEPDEFTYTTLIQGCSRTFRIDEAIRIFHDMQN--NGFRPGTLVYNSLLCGLFKATKVNE 249
           F+ D + Y   I        +  ++++F++M+   N F P    YNS+L  L K  K+N+
Sbjct: 234 FDFDLWGYNICIHAFGSWGDLVTSMKLFNEMKEDKNLFGPDMCTYNSVLSVLCKVGKIND 293

Query: 250 ACQLFEKMAQEGAKASCSTYNILVHGLIRNGRPEAAYTLFCDLKKKGQFVDGVTYSIIVL 429
           A  +++++   G +    TY ILV G  R  R + A  +F ++K  G     + Y+ ++ 
Sbjct: 294 ALIVWDELKGCGYEPDEFTYTILVRGCCRTYRMDVALRIFNEMKDNGFRPGVLVYNCVLD 353

Query: 430 QLCKEGQLEEALQLVEEMESRG 495
            L K  ++ E  Q+ E+M   G
Sbjct: 354 GLFKAAKVNEGCQMFEKMAQEG 375


>ref|XP_003539071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g01570-like [Glycine max]
          Length = 768

 Score =  272 bits (695), Expect = 2e-71
 Identities = 131/170 (77%), Positives = 147/170 (86%)
 Frame = +1

Query: 1   LISVLCRLGKVTDALIVWEELKGCGFEPDEFTYTTLIQGCSRTFRIDEAIRIFHDMQNNG 180
           LI+ LCRLGKV DA+ V+EEL G   +PD FTYT LIQ CS+T+R+++AIRIF+ MQ+NG
Sbjct: 256 LITALCRLGKVDDAITVYEELNGSAHQPDRFTYTNLIQACSKTYRMEDAIRIFNQMQSNG 315

Query: 181 FRPGTLVYNSLLCGLFKATKVNEACQLFEKMAQEGAKASCSTYNILVHGLIRNGRPEAAY 360
           FRP TL YNSLL G FKATKV EACQLFEKM QEG + SC TYNIL+HGL RNGR EAAY
Sbjct: 316 FRPDTLAYNSLLDGHFKATKVMEACQLFEKMVQEGVRPSCWTYNILIHGLFRNGRAEAAY 375

Query: 361 TLFCDLKKKGQFVDGVTYSIIVLQLCKEGQLEEALQLVEEMESRGFAVDL 510
           T+FCDLKKKGQFVDG+TYSI+VLQLCKEGQLEEALQLVEEMESRGF VDL
Sbjct: 376 TMFCDLKKKGQFVDGITYSIVVLQLCKEGQLEEALQLVEEMESRGFVVDL 425



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/126 (26%), Positives = 65/126 (51%)
 Frame = +1

Query: 133 RIDEAIRIFHDMQNNGFRPGTLVYNSLLCGLFKATKVNEACQLFEKMAQEGAKASCSTYN 312
           ++  A ++F    + G  P +  YNS++    K     EA  +  +M ++      +TYN
Sbjct: 577 KLSLACKLFEIFSDAGVDPVSYTYNSIMSSFVKKGYFAEAWAILTEMGEKFCPTDIATYN 636

Query: 313 ILVHGLIRNGRPEAAYTLFCDLKKKGQFVDGVTYSIIVLQLCKEGQLEEALQLVEEMESR 492
           +++ GL + GR + A  +   L ++G ++D V Y+ ++  L K  +++E  +L E+M S 
Sbjct: 637 MIIQGLGKMGRADLASAVLDRLLRQGGYLDIVMYNTLINALGKASRIDEVNKLFEQMRSS 696

Query: 493 GFAVDL 510
           G   D+
Sbjct: 697 GINPDV 702



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/164 (23%), Positives = 76/164 (46%)
 Frame = +1

Query: 4    ISVLCRLGKVTDALIVWEELKGCGFEPDEFTYTTLIQGCSRTFRIDEAIRIFHDMQNNGF 183
            +S+    GK++ A  ++E     G +P  +TY +++    +     EA  I  +M     
Sbjct: 569  LSIFLAKGKLSLACKLFEIFSDAGVDPVSYTYNSIMSSFVKKGYFAEAWAILTEMGEKFC 628

Query: 184  RPGTLVYNSLLCGLFKATKVNEACQLFEKMAQEGAKASCSTYNILVHGLIRNGRPEAAYT 363
                  YN ++ GL K  + + A  + +++ ++G       YN L++ L +  R +    
Sbjct: 629  PTDIATYNMIIQGLGKMGRADLASAVLDRLLRQGGYLDIVMYNTLINALGKASRIDEVNK 688

Query: 364  LFCDLKKKGQFVDGVTYSIIVLQLCKEGQLEEALQLVEEMESRG 495
            LF  ++  G   D VTY+ ++    K G+L++A + ++ M   G
Sbjct: 689  LFEQMRSSGINPDVVTYNTLIEVHSKAGRLKDAYKFLKMMLDAG 732


>ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
           [Vitis vinifera]
          Length = 792

 Score =  259 bits (662), Expect = 2e-67
 Identities = 124/170 (72%), Positives = 147/170 (86%)
 Frame = +1

Query: 1   LISVLCRLGKVTDALIVWEELKGCGFEPDEFTYTTLIQGCSRTFRIDEAIRIFHDMQNNG 180
           LI VLC +GKV DALIVWEELKG G EPD FTY  LIQGCS+++R+D+A+RIF++MQ NG
Sbjct: 278 LIRVLCLVGKVKDALIVWEELKGSGHEPDAFTYRILIQGCSKSYRMDDAMRIFNEMQYNG 337

Query: 181 FRPGTLVYNSLLCGLFKATKVNEACQLFEKMAQEGAKASCSTYNILVHGLIRNGRPEAAY 360
           F P T+VYN+LL GLFKA KV EACQ+FEKM ++G +ASC T+NI++ GL RNGR  A Y
Sbjct: 338 FCPDTIVYNTLLDGLFKARKVMEACQVFEKMVEDGVRASCWTHNIVICGLFRNGRAAAGY 397

Query: 361 TLFCDLKKKGQFVDGVTYSIIVLQLCKEGQLEEALQLVEEMESRGFAVDL 510
           TLFCDLKKKG+FVDG+TYSI+VLQLC+EGQLEEALQLVEEME+RGF VDL
Sbjct: 398 TLFCDLKKKGKFVDGITYSIVVLQLCREGQLEEALQLVEEMEARGFVVDL 447



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/126 (30%), Positives = 68/126 (53%)
 Frame = +1

Query: 133 RIDEAIRIFHDMQNNGFRPGTLVYNSLLCGLFKATKVNEACQLFEKMAQEGAKASCSTYN 312
           ++  A ++F    N G  P    YNS++    K    NEA  +F +M ++      +TYN
Sbjct: 600 KLSLACKLFEIFSNMGVDPVIYTYNSMMTAFVKKGYFNEAWGVFHEMGEKVCPPDIATYN 659

Query: 313 ILVHGLIRNGRPEAAYTLFCDLKKKGQFVDGVTYSIIVLQLCKEGQLEEALQLVEEMESR 492
           +++ GL + GR + A  +   L K+G ++D V Y+ ++  L K G+++EA +L E+M S 
Sbjct: 660 VIIQGLGKMGRADLASAVLDMLMKQGGYLDIVMYNTLINALGKAGRIDEATKLFEQMRSS 719

Query: 493 GFAVDL 510
           G   D+
Sbjct: 720 GINPDV 725



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 42/164 (25%), Positives = 80/164 (48%)
 Frame = +1

Query: 4    ISVLCRLGKVTDALIVWEELKGCGFEPDEFTYTTLIQGCSRTFRIDEAIRIFHDMQNNGF 183
            +S+    GK++ A  ++E     G +P  +TY +++    +    +EA  +FH+M     
Sbjct: 592  LSIFLAKGKLSLACKLFEIFSNMGVDPVIYTYNSMMTAFVKKGYFNEAWGVFHEMGEKVC 651

Query: 184  RPGTLVYNSLLCGLFKATKVNEACQLFEKMAQEGAKASCSTYNILVHGLIRNGRPEAAYT 363
             P    YN ++ GL K  + + A  + + + ++G       YN L++ L + GR + A  
Sbjct: 652  PPDIATYNVIIQGLGKMGRADLASAVLDMLMKQGGYLDIVMYNTLINALGKAGRIDEATK 711

Query: 364  LFCDLKKKGQFVDGVTYSIIVLQLCKEGQLEEALQLVEEMESRG 495
            LF  ++  G   D VT++ ++    K GQL+ A + ++ M   G
Sbjct: 712  LFEQMRSSGINPDVVTFNTLIEIHAKAGQLKAAYKFLKLMLDAG 755



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/120 (29%), Positives = 60/120 (50%)
 Frame = +1

Query: 1   LISVLCRLGKVTDALIVWEELKGCGFEPDEFTYTTLIQGCSRTFRIDEAIRIFHDMQNNG 180
           +++   + G   +A  V+ E+      PD  TY  +IQG  +  R D A  +   +   G
Sbjct: 626 MMTAFVKKGYFNEAWGVFHEMGEKVCPPDIATYNVIIQGLGKMGRADLASAVLDMLMKQG 685

Query: 181 FRPGTLVYNSLLCGLFKATKVNEACQLFEKMAQEGAKASCSTYNILVHGLIRNGRPEAAY 360
                ++YN+L+  L KA +++EA +LFE+M   G      T+N L+    + G+ +AAY
Sbjct: 686 GYLDIVMYNTLINALGKAGRIDEATKLFEQMRSSGINPDVVTFNTLIEIHAKAGQLKAAY 745



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
 Frame = +1

Query: 49  VWEELKGC-GFEPDEFTYTTLIQGCSRTFRIDEAIRIFHDMQN-----NGFRPGTLVYNS 210
           V+E+L+    F+ D   Y   I        +  A+ +F +M++     + F P    YNS
Sbjct: 218 VFEKLRAKKDFDLDTQGYNICIHAFGCWGDLGTALNLFKEMKDKSLNSSSFGPDLCTYNS 277

Query: 211 LLCGLFKATKVNEACQLFEKMAQEGAKASCSTYNILVHGLIRNGRPEAAYTLFCDLKKKG 390
           L+  L    KV +A  ++E++   G +    TY IL+ G  ++ R + A  +F +++  G
Sbjct: 278 LIRVLCLVGKVKDALIVWEELKGSGHEPDAFTYRILIQGCSKSYRMDDAMRIFNEMQYNG 337

Query: 391 QFVDGVTYSIIVLQLCKEGQLEEALQLVEEMESRG 495
              D + Y+ ++  L K  ++ EA Q+ E+M   G
Sbjct: 338 FCPDTIVYNTLLDGLFKARKVMEACQVFEKMVEDG 372


>ref|XP_002874971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297320808|gb|EFH51230.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 802

 Score =  244 bits (622), Expect = 7e-63
 Identities = 118/170 (69%), Positives = 138/170 (81%)
 Frame = +1

Query: 1   LISVLCRLGKVTDALIVWEELKGCGFEPDEFTYTTLIQGCSRTFRIDEAIRIFHDMQNNG 180
           LI VLC  GK  DALIVW+ELK  G EPD  TY  LIQGC +++R+D+A+RIF +MQ NG
Sbjct: 293 LIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIFGEMQYNG 352

Query: 181 FRPGTLVYNSLLCGLFKATKVNEACQLFEKMAQEGAKASCSTYNILVHGLIRNGRPEAAY 360
           F P T+VYN LL G  KA KV EACQLFEKM QEG +ASC TYNIL+ GL RNGR EA +
Sbjct: 353 FVPDTVVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGF 412

Query: 361 TLFCDLKKKGQFVDGVTYSIIVLQLCKEGQLEEALQLVEEMESRGFAVDL 510
           TLFCDLKKKGQFVD +T+SI+VLQLC+EG+LEEA++LVEEME+RGF VDL
Sbjct: 413 TLFCDLKKKGQFVDAITFSIVVLQLCREGKLEEAVKLVEEMETRGFTVDL 462



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/103 (28%), Positives = 54/103 (52%)
 Frame = +1

Query: 202 YNSLLCGLFKATKVNEACQLFEKMAQEGAKASCSTYNILVHGLIRNGRPEAAYTLFCDLK 381
           YNS++    K         + ++M +    A  +TYN+++ GL + GR + A  +   L 
Sbjct: 631 YNSMMSSFVKKGYFKTVRGVLDQMGENFCAADIATYNVIIQGLGKMGRADLAGAVLDRLT 690

Query: 382 KKGQFVDGVTYSIIVLQLCKEGQLEEALQLVEEMESRGFAVDL 510
           K+G ++D V Y+ ++  + K  +L+ A QL + M+S G   D+
Sbjct: 691 KQGGYLDIVMYNTLINAIGKANRLDAATQLFDHMKSNGINPDV 733


>ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g01570-like [Cucumis sativus]
           gi|449523383|ref|XP_004168703.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g01570-like [Cucumis sativus]
          Length = 803

 Score =  243 bits (620), Expect = 1e-62
 Identities = 121/170 (71%), Positives = 137/170 (80%)
 Frame = +1

Query: 1   LISVLCRLGKVTDALIVWEELKGCGFEPDEFTYTTLIQGCSRTFRIDEAIRIFHDMQNNG 180
           +I VLC +GKV DALIVWEELKG G EPD FTY  +IQGC ++ R+D+A  IF++M+ NG
Sbjct: 291 IIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNG 350

Query: 181 FRPGTLVYNSLLCGLFKATKVNEACQLFEKMAQEGAKASCSTYNILVHGLIRNGRPEAAY 360
             P T+VYNSLL GLFKA KV EACQLF+KM QE  +AS  TYNIL+ GL RNGR EA Y
Sbjct: 351 LIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGY 410

Query: 361 TLFCDLKKKGQFVDGVTYSIIVLQLCKEGQLEEALQLVEEMESRGFAVDL 510
           TLFCDLKKKGQ VD VTYSII+LQLCKE  LEEALQLVEEME+RGF VDL
Sbjct: 411 TLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVDL 460



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 41/164 (25%), Positives = 79/164 (48%)
 Frame = +1

Query: 4    ISVLCRLGKVTDALIVWEELKGCGFEPDEFTYTTLIQGCSRTFRIDEAIRIFHDMQNNGF 183
            +S+    GK+  A  ++E     G  P ++TY +++    +     +A  IF++M  N  
Sbjct: 605  LSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVC 664

Query: 184  RPGTLVYNSLLCGLFKATKVNEACQLFEKMAQEGAKASCSTYNILVHGLIRNGRPEAAYT 363
                  YN ++ GL K  + + A  + EK+ ++G       YN L++ L + GR +    
Sbjct: 665  PADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNK 724

Query: 364  LFCDLKKKGQFVDGVTYSIIVLQLCKEGQLEEALQLVEEMESRG 495
            LF  ++  G   D VT++ ++    K G+L++A + ++ M   G
Sbjct: 725  LFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSG 768



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/126 (26%), Positives = 68/126 (53%)
 Frame = +1

Query: 133 RIDEAIRIFHDMQNNGFRPGTLVYNSLLCGLFKATKVNEACQLFEKMAQEGAKASCSTYN 312
           +++ A ++F    + G  P    YNS+L    K    ++A  +F +M +    A  +TYN
Sbjct: 613 KLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATYN 672

Query: 313 ILVHGLIRNGRPEAAYTLFCDLKKKGQFVDGVTYSIIVLQLCKEGQLEEALQLVEEMESR 492
           +++ GL + GR + A ++   L ++G ++D V Y+ ++  L K G++++  +L  +M + 
Sbjct: 673 VIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNS 732

Query: 493 GFAVDL 510
           G   D+
Sbjct: 733 GINPDV 738