BLASTX nr result

ID: Glycyrrhiza24_contig00027973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027973
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555540.1| PREDICTED: ribosomal N-lysine methyltransfer...    87   1e-15
ref|XP_003622367.1| SET domain-containing protein [Medicago trun...    82   6e-14
ref|XP_002876372.1| SET domain-containing protein [Arabidopsis l...    69   4e-10
ref|NP_191216.1| SET domain-containing protein [Arabidopsis thal...    66   3e-09
ref|XP_002306017.1| SET domain-containing protein [Populus trich...    65   6e-09

>ref|XP_003555540.1| PREDICTED: ribosomal N-lysine methyltransferase 3-like [Glycine
           max]
          Length = 506

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/46 (86%), Positives = 42/46 (91%)
 Frame = -2

Query: 139 MATRRLRAFKRWMKSNGFEWSDALEFVDTPEVGIAVRALCQLKEGD 2
           MA+RRLRAFKRWMKS G EWSDALEFVDTPE G+ VRALCQLKEGD
Sbjct: 1   MASRRLRAFKRWMKSKGLEWSDALEFVDTPEEGVEVRALCQLKEGD 46


>ref|XP_003622367.1| SET domain-containing protein [Medicago truncatula]
           gi|355497382|gb|AES78585.1| SET domain-containing
           protein [Medicago truncatula]
          Length = 497

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/46 (78%), Positives = 41/46 (89%)
 Frame = -2

Query: 139 MATRRLRAFKRWMKSNGFEWSDALEFVDTPEVGIAVRALCQLKEGD 2
           MATRRLRA KRWMKSNGFEWS AL+FVDTPE GI+V+ALC++  GD
Sbjct: 1   MATRRLRALKRWMKSNGFEWSSALQFVDTPEEGISVKALCEINAGD 46


>ref|XP_002876372.1| SET domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322210|gb|EFH52631.1| SET domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 518

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/46 (69%), Positives = 36/46 (78%)
 Frame = -2

Query: 139 MATRRLRAFKRWMKSNGFEWSDALEFVDTPEVGIAVRALCQLKEGD 2
           MATRRLRAFKRWMK+NG + SDAL  VD    G++VRA C LKEGD
Sbjct: 1   MATRRLRAFKRWMKANGVDCSDALNLVDDQNDGVSVRAFCDLKEGD 46


>ref|NP_191216.1| SET domain-containing protein [Arabidopsis thaliana]
           gi|7594535|emb|CAB88060.1| putative protein [Arabidopsis
           thaliana] gi|332646015|gb|AEE79536.1| SET
           domain-containing protein [Arabidopsis thaliana]
          Length = 531

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/46 (65%), Positives = 36/46 (78%)
 Frame = -2

Query: 139 MATRRLRAFKRWMKSNGFEWSDALEFVDTPEVGIAVRALCQLKEGD 2
           MATRRLRAFKRWM++NG + S+AL  VD    G++VRA C LKEGD
Sbjct: 1   MATRRLRAFKRWMQANGVDCSEALNLVDDENDGVSVRAFCDLKEGD 46


>ref|XP_002306017.1| SET domain-containing protein [Populus trichocarpa]
           gi|222848981|gb|EEE86528.1| SET domain-containing
           protein [Populus trichocarpa]
          Length = 468

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/47 (65%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
 Frame = -2

Query: 139 MATRRLRAFKRWMKSNGFEWS-DALEFVDTPEVGIAVRALCQLKEGD 2
           M++RRLRAFKRWM S G EWS D L+F+D PE GI+V A   LKEGD
Sbjct: 1   MSSRRLRAFKRWMISQGIEWSNDTLQFIDNPEEGISVNAFWDLKEGD 47


Top