BLASTX nr result

ID: Glycyrrhiza24_contig00027963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027963
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624725.1| Dof zinc finger protein [Medicago truncatula...    95   5e-18
gb|ABN08462.1| Zinc finger, Dof-type [Medicago truncatula]             95   5e-18
ref|XP_003554055.1| PREDICTED: dof zinc finger protein DOF5.2-li...    91   1e-16
gb|ACU18311.1| unknown [Glycine max]                                   89   5e-16
gb|AFK42609.1| unknown [Lotus japonicus]                               87   1e-15

>ref|XP_003624725.1| Dof zinc finger protein [Medicago truncatula]
           gi|355499740|gb|AES80943.1| Dof zinc finger protein
           [Medicago truncatula]
          Length = 514

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 48/85 (56%), Positives = 60/85 (70%), Gaps = 11/85 (12%)
 Frame = -2

Query: 226 RNVPVGAGRRKNKHISSQYRHMIVASDGIPAAR-----------SSTDNGTVLKFGQDAP 80
           RNVP+GAGRRKNKH++SQYR +IV ++GIP  R           +STDN TVLKFG D P
Sbjct: 140 RNVPIGAGRRKNKHLASQYRQIIVTTNGIPTTRLESTNSSDHHHTSTDNETVLKFGPDTP 199

Query: 79  LCESMESMHNLRNNKTSVDHDPTST 5
           LCESMESM +LR+ K + D +  S+
Sbjct: 200 LCESMESMLHLRDQKRNADANSNSS 224


>gb|ABN08462.1| Zinc finger, Dof-type [Medicago truncatula]
          Length = 422

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 48/85 (56%), Positives = 60/85 (70%), Gaps = 11/85 (12%)
 Frame = -2

Query: 226 RNVPVGAGRRKNKHISSQYRHMIVASDGIPAAR-----------SSTDNGTVLKFGQDAP 80
           RNVP+GAGRRKNKH++SQYR +IV ++GIP  R           +STDN TVLKFG D P
Sbjct: 140 RNVPIGAGRRKNKHLASQYRQIIVTTNGIPTTRLESTNSSDHHHTSTDNETVLKFGPDTP 199

Query: 79  LCESMESMHNLRNNKTSVDHDPTST 5
           LCESMESM +LR+ K + D +  S+
Sbjct: 200 LCESMESMLHLRDQKRNADANSNSS 224


>ref|XP_003554055.1| PREDICTED: dof zinc finger protein DOF5.2-like [Glycine max]
          Length = 483

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 47/92 (51%), Positives = 58/92 (63%), Gaps = 24/92 (26%)
 Frame = -2

Query: 226 RNVPVGAGRRKNKHISSQYRHMIVASDGIPAA------------------------RSST 119
           RNVP+GAGRRKNKH++SQY+H+IV SDGIPA+                        RSS 
Sbjct: 147 RNVPIGAGRRKNKHLASQYQHIIVTSDGIPASRLETTDSSGLQQQHIASLESSVSFRSSA 206

Query: 118 DNGTVLKFGQDAPLCESMESMHNLRNNKTSVD 23
           DN T+LKFG D PLC+SM+SM NLR+ +   D
Sbjct: 207 DNCTMLKFGTDTPLCKSMDSMLNLRDQRRCAD 238


>gb|ACU18311.1| unknown [Glycine max]
          Length = 483

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 47/92 (51%), Positives = 57/92 (61%), Gaps = 24/92 (26%)
 Frame = -2

Query: 226 RNVPVGAGRRKNKHISSQYRHMIVASDGIPAA------------------------RSST 119
           RNVP+GAGRRKNKH +SQY+H+IV SDGIPA+                        RSS 
Sbjct: 147 RNVPIGAGRRKNKHRTSQYQHIIVTSDGIPASRLETTDSSGLQQQHIASLESSVSFRSSA 206

Query: 118 DNGTVLKFGQDAPLCESMESMHNLRNNKTSVD 23
           DN T+LKFG D PLC+SM+SM NLR+ +   D
Sbjct: 207 DNCTMLKFGTDTPLCKSMDSMLNLRDQRRCAD 238


>gb|AFK42609.1| unknown [Lotus japonicus]
          Length = 472

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 48/91 (52%), Positives = 59/91 (64%), Gaps = 18/91 (19%)
 Frame = -2

Query: 226 RNVPVGAGRRKNKHISSQYRHMIVASDGIPAA------------------RSSTDNGTVL 101
           R+VPVGAGRRKNK ++SQ+RH+IV S+GIP +                  R ST+NGTVL
Sbjct: 146 RSVPVGAGRRKNKQLASQFRHIIVNSEGIPTSRLETTGSYGYQQHMSSDFRPSTENGTVL 205

Query: 100 KFGQDAPLCESMESMHNLRNNKTSVDHDPTS 8
           KFG +APL ESMESM NLR  K   D + +S
Sbjct: 206 KFGPNAPLYESMESMLNLREQKRIADSNSSS 236


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