BLASTX nr result
ID: Glycyrrhiza24_contig00027950
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00027950
(309 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003520480.1| PREDICTED: cell division cycle protein 48 ho... 182 2e-44
ref|XP_003624920.1| AAA family ATPase CDC48 subfamily [Medicago ... 162 3e-38
ref|XP_002308870.1| predicted protein [Populus trichocarpa] gi|2... 160 1e-37
ref|XP_002277745.2| PREDICTED: cell division cycle protein 48 ho... 160 1e-37
emb|CBI32813.3| unnamed protein product [Vitis vinifera] 160 1e-37
>ref|XP_003520480.1| PREDICTED: cell division cycle protein 48 homolog AF_1297-like
[Glycine max]
Length = 1036
Score = 182 bits (463), Expect = 2e-44
Identities = 89/102 (87%), Positives = 92/102 (90%)
Frame = -3
Query: 307 LLKDIISSSVKDVLSSFGLRATRGVLLHGPPGTGKTSLAQLCAHDAGVSFFPINGPEIIK 128
LLKDIISSSV D LSSFGLR TRGVLLHGPPGTGKTSLAQLCAHD GV FFPINGPEI+
Sbjct: 427 LLKDIISSSVSDALSSFGLRTTRGVLLHGPPGTGKTSLAQLCAHDVGVKFFPINGPEIVT 486
Query: 127 PYYGESEQALHEVFDSAIQAAPAVVFIDEVDAITPTRKDGGE 2
YYGESEQ LHE+FDSAIQAAPAVVFIDE+DAI P RKDGGE
Sbjct: 487 QYYGESEQQLHELFDSAIQAAPAVVFIDELDAIAPARKDGGE 528
Score = 80.1 bits (196), Expect = 2e-13
Identities = 36/86 (41%), Positives = 54/86 (62%)
Frame = -3
Query: 274 DVLSSFGLRATRGVLLHGPPGTGKTSLAQLCAHDAGVSFFPINGPEIIKPYYGESEQALH 95
D + G R GVL+ GPPG KT +A+ A +AG++F + GPE+ + GESE+A+
Sbjct: 767 DAFNRIGTRPPTGVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVR 826
Query: 94 EVFDSAIQAAPAVVFIDEVDAITPTR 17
+F A AP++VF DE+D++ TR
Sbjct: 827 SLFAKARANAPSIVFFDEIDSLAVTR 852
>ref|XP_003624920.1| AAA family ATPase CDC48 subfamily [Medicago truncatula]
gi|355499935|gb|AES81138.1| AAA family ATPase CDC48
subfamily [Medicago truncatula]
Length = 1046
Score = 162 bits (410), Expect = 3e-38
Identities = 80/102 (78%), Positives = 89/102 (87%)
Frame = -3
Query: 307 LLKDIISSSVKDVLSSFGLRATRGVLLHGPPGTGKTSLAQLCAHDAGVSFFPINGPEIIK 128
LLK IIS S+ D+LS FG + TRGVLLHGPPGTGKTSLAQLCAHDAGV+FF INGPEI+
Sbjct: 400 LLKRIISFSLNDILSRFGQQNTRGVLLHGPPGTGKTSLAQLCAHDAGVNFFSINGPEIVT 459
Query: 127 PYYGESEQALHEVFDSAIQAAPAVVFIDEVDAITPTRKDGGE 2
YGESE+AL EVFDSAIQAAPAV+FID++DAI P RKDGGE
Sbjct: 460 ENYGESEKALQEVFDSAIQAAPAVLFIDKIDAIAPPRKDGGE 501
Score = 81.3 bits (199), Expect = 8e-14
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Frame = -3
Query: 277 KDVLSSFGLRATRGVLLHGPPGTGKTSLAQLCAHDAGVSFFPINGPEIIKPYYGESEQAL 98
+D + G VL+ GPPG KT +A+ A +AG++F + GPE+ + GESE+A+
Sbjct: 741 RDAFTRIGTDPPTAVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAV 800
Query: 97 HEVFDSAIQAAPAVVFIDEVDAITPTR-KDG 8
+FD A APA++F DE+D++ TR KDG
Sbjct: 801 RSLFDKARANAPAIIFFDEIDSLAITRGKDG 831
>ref|XP_002308870.1| predicted protein [Populus trichocarpa] gi|222854846|gb|EEE92393.1|
predicted protein [Populus trichocarpa]
Length = 1042
Score = 160 bits (405), Expect = 1e-37
Identities = 77/102 (75%), Positives = 87/102 (85%)
Frame = -3
Query: 307 LLKDIISSSVKDVLSSFGLRATRGVLLHGPPGTGKTSLAQLCAHDAGVSFFPINGPEIIK 128
+LKDII SS K+ LS FGLR T+GVLLHGPPGTGKTSLA+LC DAGV+ F +NGPEI
Sbjct: 419 VLKDIIVSSTKNTLSCFGLRTTKGVLLHGPPGTGKTSLARLCVIDAGVNLFSVNGPEIFS 478
Query: 127 PYYGESEQALHEVFDSAIQAAPAVVFIDEVDAITPTRKDGGE 2
YYGESEQA+H+VFDSA Q+APAVVFIDE+DAI P RKDGGE
Sbjct: 479 QYYGESEQAMHKVFDSACQSAPAVVFIDELDAIAPARKDGGE 520
Score = 75.5 bits (184), Expect = 4e-12
Identities = 33/87 (37%), Positives = 51/87 (58%)
Frame = -3
Query: 277 KDVLSSFGLRATRGVLLHGPPGTGKTSLAQLCAHDAGVSFFPINGPEIIKPYYGESEQAL 98
+D G R G+L+ GPPG KT +A+ A AG++F + GPE+ + GESE+A+
Sbjct: 781 QDAFKRIGTRPPTGILMFGPPGCSKTLMARAVASKAGLNFLAVKGPELFSKWVGESEKAV 840
Query: 97 HEVFDSAIQAAPAVVFIDEVDAITPTR 17
+F A AP+++F DE+D + R
Sbjct: 841 RSLFAKARANAPSIIFFDEIDGLAVIR 867
>ref|XP_002277745.2| PREDICTED: cell division cycle protein 48 homolog AF_1297-like
[Vitis vinifera]
Length = 1030
Score = 160 bits (404), Expect = 1e-37
Identities = 80/103 (77%), Positives = 89/103 (86%), Gaps = 1/103 (0%)
Frame = -3
Query: 307 LLKDII-SSSVKDVLSSFGLRATRGVLLHGPPGTGKTSLAQLCAHDAGVSFFPINGPEII 131
+LKDII S+SVK+ LSS GLR T+GVLLHGPPGTGKTSLAQLC DAGV+ F +NG EI+
Sbjct: 433 VLKDIIISTSVKNTLSSMGLRTTKGVLLHGPPGTGKTSLAQLCICDAGVNLFSVNGAEIV 492
Query: 130 KPYYGESEQALHEVFDSAIQAAPAVVFIDEVDAITPTRKDGGE 2
YYGESEQALHE+FDSA QAAPAVVFIDE+DAI P RKDGGE
Sbjct: 493 SQYYGESEQALHEIFDSASQAAPAVVFIDELDAIAPARKDGGE 535
Score = 77.8 bits (190), Expect = 8e-13
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = -3
Query: 277 KDVLSSFGLRATRGVLLHGPPGTGKTSLAQLCAHDAGVSFFPINGPEIIKPYYGESEQAL 98
+D G R GVLL GPPG KT +A+ A +AG++F + GPE+ + GESE+A+
Sbjct: 764 QDAFKRIGTRPPTGVLLFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAV 823
Query: 97 HEVFDSAIQAAPAVVFIDEVDAITPTR 17
+F A AP+++F DE+D + R
Sbjct: 824 RSLFAKARANAPSIIFFDEIDGLAVIR 850
>emb|CBI32813.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 160 bits (404), Expect = 1e-37
Identities = 80/103 (77%), Positives = 89/103 (86%), Gaps = 1/103 (0%)
Frame = -3
Query: 307 LLKDII-SSSVKDVLSSFGLRATRGVLLHGPPGTGKTSLAQLCAHDAGVSFFPINGPEII 131
+LKDII S+SVK+ LSS GLR T+GVLLHGPPGTGKTSLAQLC DAGV+ F +NG EI+
Sbjct: 412 VLKDIIISTSVKNTLSSMGLRTTKGVLLHGPPGTGKTSLAQLCICDAGVNLFSVNGAEIV 471
Query: 130 KPYYGESEQALHEVFDSAIQAAPAVVFIDEVDAITPTRKDGGE 2
YYGESEQALHE+FDSA QAAPAVVFIDE+DAI P RKDGGE
Sbjct: 472 SQYYGESEQALHEIFDSASQAAPAVVFIDELDAIAPARKDGGE 514
Score = 77.8 bits (190), Expect = 8e-13
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = -3
Query: 277 KDVLSSFGLRATRGVLLHGPPGTGKTSLAQLCAHDAGVSFFPINGPEIIKPYYGESEQAL 98
+D G R GVLL GPPG KT +A+ A +AG++F + GPE+ + GESE+A+
Sbjct: 690 QDAFKRIGTRPPTGVLLFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAV 749
Query: 97 HEVFDSAIQAAPAVVFIDEVDAITPTR 17
+F A AP+++F DE+D + R
Sbjct: 750 RSLFAKARANAPSIIFFDEIDGLAVIR 776