BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027948
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526351.1| PREDICTED: transcription elongation factor S...   261   4e-68
ref|XP_003637458.1| Transcription elongation factor SPT6 [Medica...   242   3e-62
ref|XP_004164643.1| PREDICTED: transcription elongation factor S...   214   6e-54
ref|XP_004152869.1| PREDICTED: transcription elongation factor S...   214   6e-54
ref|XP_003553378.1| PREDICTED: transcription elongation factor S...   211   7e-53

>ref|XP_003526351.1| PREDICTED: transcription elongation factor SPT6-like [Glycine max]
          Length = 1622

 Score =  261 bits (668), Expect = 4e-68
 Identities = 127/179 (70%), Positives = 149/179 (83%), Gaps = 5/179 (2%)
 Frame = +3

Query: 3    YVHKDILEGGKGHDMKSLLGLGETLKIGQDIFENIDKVIEHYVNPLVVHLKALINFRKFK 182
            YVHKDI+EGGK  ++  L   GETLKIG++ F++I++VIEHYVNPLVVHLK +INFRKFK
Sbjct: 1235 YVHKDIVEGGKSQNLPEL---GETLKIGEETFKDINQVIEHYVNPLVVHLKDMINFRKFK 1291

Query: 183  KGSKAEVDQLLKIEKEEYPKRIPYGFGISYEHPGIFILSYIRTTNPHHEFIAIHPKGFKF 362
            KG+KAEVD+LLK+EK+EYP RI YGFGISYEHPG FILSYIR+ NPHHEF+AI  KGFKF
Sbjct: 1292 KGTKAEVDELLKLEKDEYPNRIAYGFGISYEHPGTFILSYIRSRNPHHEFVAIQRKGFKF 1351

Query: 363  RKQIFNSVEQLVAYFQNHINDNVARSKDHVTGGS-----SEGWKSNNVDQQKQSIGYND 524
            RKQIF ++EQLVAYFQNHINDNVA +K  +  GS     S GW+SNNVDQ  +SI YND
Sbjct: 1352 RKQIFKNIEQLVAYFQNHINDNVAPAKSCIAVGSFRESLSGGWRSNNVDQHTESIAYND 1410


>ref|XP_003637458.1| Transcription elongation factor SPT6 [Medicago truncatula]
            gi|355503393|gb|AES84596.1| Transcription elongation
            factor SPT6 [Medicago truncatula]
          Length = 2159

 Score =  242 bits (618), Expect = 3e-62
 Identities = 113/160 (70%), Positives = 135/160 (84%), Gaps = 3/160 (1%)
 Frame = +3

Query: 3    YVHKDILEGGKGHDMKSLLGLGETLKIGQDIFENIDKVIEHYVNPLVVHLKALINFRKFK 182
            YVHKD++EGGK HDM  L+ LG TLK+G++IF+N+DKVIE Y++PLVVHLK LINFRKFK
Sbjct: 1204 YVHKDVVEGGKSHDMNRLVELGSTLKVGEEIFDNLDKVIELYLDPLVVHLKDLINFRKFK 1263

Query: 183  KGSKAEVDQLLKIEKEEYPKRIPYGFGISYEHPGIFILSYIRTTNPHHEFIAIHPKGFKF 362
            KG+KAEVD+LLK EKEE+P RIPYG GISYEHPG+FILSYIR+T PHHEFIAIHPKGFKF
Sbjct: 1264 KGTKAEVDELLKHEKEEHPNRIPYGIGISYEHPGLFILSYIRSTKPHHEFIAIHPKGFKF 1323

Query: 363  RKQIFNSVEQLVAYFQNHIND---NVARSKDHVTGGSSEG 473
            RK +FN++EQ++ YFQNHIND      +SKD+   G   G
Sbjct: 1324 RKHVFNNIEQVMGYFQNHINDVPQAKDQSKDYNDSGGGRG 1363


>ref|XP_004164643.1| PREDICTED: transcription elongation factor SPT6-like [Cucumis
           sativus]
          Length = 482

 Score =  214 bits (546), Expect = 6e-54
 Identities = 104/197 (52%), Positives = 142/197 (72%), Gaps = 28/197 (14%)
 Frame = +3

Query: 3   YVHKDILEGGKGH-DMKSLLGLGETLKIGQDIFENIDKVIEHYVNPLVVHLKALINFRKF 179
           Y HKDI+EGGK H D+ SLL +G+TLKIG+D FE++D+V++ YV+PLV HLKA++++RKF
Sbjct: 127 YAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKAMLSYRKF 186

Query: 180 KKGSKAEVDQLLKIEKEEYPKRIPYGFGISYEHPGIFILSYIRTTNPHHEFIAIHPKGFK 359
           ++G+KAEVD+L+KIEK EYP RI YGFGIS+EHPG FIL+YIR+TNPHHE+I ++PKGFK
Sbjct: 187 RRGTKAEVDELMKIEKSEYPMRIIYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFK 246

Query: 360 FRKQIFNSVEQLVAYFQNHIND-------------NVARSKDHVTGGSSE---------- 470
           FRK++F  +++LVAYFQ HI+D              +   +   TGGSS           
Sbjct: 247 FRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGGS 306

Query: 471 ----GWKSNNVDQQKQS 509
               GW+S + D+ + S
Sbjct: 307 SHEGGWRSQSFDRDRSS 323


>ref|XP_004152869.1| PREDICTED: transcription elongation factor SPT6-like [Cucumis
            sativus]
          Length = 1631

 Score =  214 bits (546), Expect = 6e-54
 Identities = 104/197 (52%), Positives = 142/197 (72%), Gaps = 28/197 (14%)
 Frame = +3

Query: 3    YVHKDILEGGKGH-DMKSLLGLGETLKIGQDIFENIDKVIEHYVNPLVVHLKALINFRKF 179
            Y HKDI+EGGK H D+ SLL +G+TLKIG+D FE++D+V++ YV+PLV HLKA++++RKF
Sbjct: 1276 YAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKAMLSYRKF 1335

Query: 180  KKGSKAEVDQLLKIEKEEYPKRIPYGFGISYEHPGIFILSYIRTTNPHHEFIAIHPKGFK 359
            ++G+KAEVD+L+KIEK EYP RI YGFGIS+EHPG FIL+YIR+TNPHHE+I ++PKGFK
Sbjct: 1336 RRGTKAEVDELMKIEKSEYPMRIIYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFK 1395

Query: 360  FRKQIFNSVEQLVAYFQNHIND-------------NVARSKDHVTGGSSE---------- 470
            FRK++F  +++LVAYFQ HI+D              +   +   TGGSS           
Sbjct: 1396 FRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGGS 1455

Query: 471  ----GWKSNNVDQQKQS 509
                GW+S + D+ + S
Sbjct: 1456 SHEGGWRSQSFDRDRSS 1472


>ref|XP_003553378.1| PREDICTED: transcription elongation factor SPT6-like [Glycine max]
          Length = 1617

 Score =  211 bits (537), Expect = 7e-53
 Identities = 94/142 (66%), Positives = 125/142 (88%), Gaps = 1/142 (0%)
 Frame = +3

Query: 3    YVHKDILEGGKGH-DMKSLLGLGETLKIGQDIFENIDKVIEHYVNPLVVHLKALINFRKF 179
            Y HKDI+EGGK H D+ SLL +G+TLKIG+D FE++D+V++ YV+PLV HLKA++N+RKF
Sbjct: 1266 YAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKAMLNYRKF 1325

Query: 180  KKGSKAEVDQLLKIEKEEYPKRIPYGFGISYEHPGIFILSYIRTTNPHHEFIAIHPKGFK 359
            +KG+KAEVD+LLK+EK EYP RI Y FGIS+EHPG FIL+YIR+TNPHHE+I ++PKGF+
Sbjct: 1326 RKGTKAEVDELLKMEKAEYPMRIVYSFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFR 1385

Query: 360  FRKQIFNSVEQLVAYFQNHIND 425
            FRK++F  +++LVAYFQ HI+D
Sbjct: 1386 FRKKMFEDIDRLVAYFQRHIDD 1407