BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027946
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    85   7e-15
gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptas...    72   5e-11
ref|XP_002317858.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]          70   2e-10
gb|AEL30350.1| RNA-directed DNA polymerase [Arachis hypogaea]          70   2e-10

>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 1296

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 38/94 (40%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
 Frame = -2

Query: 285  RTLRNFIWKGHADKGLHVVGWEKVTQPTKLGGLGVRLTCTQNTSLLGKLA*ELIHCPEKL 106
            +T RNF+WKG  +KG+H+V W+ +T+P  +GGLG+R     N  LLGKL  +++    KL
Sbjct: 822  QTARNFLWKGSNNKGIHLVNWKTITRPKSIGGLGIRSARDANICLLGKLVWDMVQSTNKL 881

Query: 105  WVQVFRDKYIKGEAIFCAR-NKKGSSTWNAIMKA 7
            WV +   KY  G ++  A  N   S +W +I++A
Sbjct: 882  WVNLLAKKYSSGTSLLEANVNSNSSPSWFSIIRA 915


>gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 869

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
 Frame = -2

Query: 246 KGLHVVGWEKVTQPTKLGGLGVRLTCTQNTSLLGKLA*ELIHCPEKLWVQVFRDKYIKGE 67
           +G+H+VGW+K+  P  LGGLG++     NT LLGKL  EL H   KLWV +   KY  G 
Sbjct: 353 RGVHLVGWKKIAMPRHLGGLGIKSAREANTCLLGKLVWELFHNKHKLWVSLLAAKYTAGP 412

Query: 66  AIFCARNKKGSS-TWNAIMKALN 1
            +  A     SS  W++I++A N
Sbjct: 413 NLLNASITSSSSPIWSSIIRAKN 435


>ref|XP_002317858.1| predicted protein [Populus trichocarpa] gi|222858531|gb|EEE96078.1|
           predicted protein [Populus trichocarpa]
          Length = 1052

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
 Frame = -2

Query: 285 RTLRNFIWKGHADKGL-HVVGWEKVTQPTKLGGLGVRLTCTQNTSLLGKLA*ELIHCPEK 109
           + ++ FIW      G  +++ W  VT+P   GGLGVR T   N SLLGKL   L + P+K
Sbjct: 667 KIVKQFIWGNQETGGSWNLINWNMVTRPRINGGLGVRETRFGNISLLGKLIWHLPNSPDK 726

Query: 108 LWVQVFRDKYIKGEAIFCARNKKGSST--WNAIMKAL 4
           LWVQ+   KY+K + +   +N   SS+  W +I++AL
Sbjct: 727 LWVQMLHKKYMKNQLLVQIQNYSNSSSYCWKSIIRAL 763


>gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 1613

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/93 (40%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
 Frame = -2

Query: 279  LRNFIWKGHAD-KGLHVVGWEKVTQPTKLGGLGVRLTCTQNTSLLGKLA*ELIHCPEKLW 103
            +RNF+WKG  D +GL++V W+ +  P K GGLG+R     N +LLGKL       P KLW
Sbjct: 1155 MRNFLWKGQVDGRGLNLVSWKVLVTPKKYGGLGIRDPYCVNITLLGKLVWTFFQQPNKLW 1214

Query: 102  VQVFRDKYIKG-EAIFCARNKKGSSTWNAIMKA 7
            VQ+   KY       F     K S  W  + KA
Sbjct: 1215 VQLLDAKYRSSLYDCFSYPKNKDSPIWRCLCKA 1247


>gb|AEL30350.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 673

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/93 (40%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
 Frame = -2

Query: 279 LRNFIWKGHAD-KGLHVVGWEKVTQPTKLGGLGVRLTCTQNTSLLGKLA*ELIHCPEKLW 103
           +RNF+WKG  D +GL++V W+ +  P K GGLG+R     N +LLGKL       P KLW
Sbjct: 155 MRNFLWKGQVDGRGLNLVSWKVLVTPKKYGGLGIRDPYCVNIALLGKLVWTFFQQPNKLW 214

Query: 102 VQVFRDKYIKG-EAIFCARNKKGSSTWNAIMKA 7
           VQ+   KY       F     K S  W  + KA
Sbjct: 215 VQLLDAKYRSSLYDCFSYPKNKDSPIWRCLCKA 247