BLASTX nr result

ID: Glycyrrhiza24_contig00027937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027937
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524045.1| PREDICTED: RINT1-like protein-like [Glycine ...   314   5e-84
ref|XP_003532305.1| PREDICTED: RINT1-like protein-like [Glycine ...   309   2e-82
ref|XP_003622992.1| RAD50-interacting protein [Medicago truncatu...   307   5e-82
ref|XP_002330095.1| predicted protein [Populus trichocarpa] gi|2...   284   6e-75
ref|XP_002268222.1| PREDICTED: RINT1-like protein-like [Vitis vi...   279   1e-73

>ref|XP_003524045.1| PREDICTED: RINT1-like protein-like [Glycine max]
          Length = 796

 Score =  314 bits (804), Expect = 5e-84
 Identities = 155/169 (91%), Positives = 165/169 (97%)
 Frame = +1

Query: 1   LRQPLWVIEELVNPLSLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDEMLQPLVDEAK 180
           LRQPLWVIEELVNPLSLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDE+LQPLVDEAK
Sbjct: 288 LRQPLWVIEELVNPLSLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDELLQPLVDEAK 347

Query: 181 VVGYSCREEWISAMVTSLSTHLAKEIFPSYITHLDEESVTGIQSSARISWLHLIDLMIAF 360
           ++GYSCREEWISAMVTSL+T+LAKEIFPSYI+ LD ESVTGIQSSARISWLHLIDLMIAF
Sbjct: 348 LLGYSCREEWISAMVTSLTTYLAKEIFPSYISQLDGESVTGIQSSARISWLHLIDLMIAF 407

Query: 361 DKRIKSLVEHSGISVSFDDDVILQRISSLSVFCDRPDWLDLWAEIELGE 507
           DKRIKSLVEHSGI +SFDDD I+Q+ISSLSVFCDRPDWLDLWAEIELG+
Sbjct: 408 DKRIKSLVEHSGILLSFDDD-IMQKISSLSVFCDRPDWLDLWAEIELGD 455


>ref|XP_003532305.1| PREDICTED: RINT1-like protein-like [Glycine max]
          Length = 796

 Score =  309 bits (791), Expect = 2e-82
 Identities = 153/169 (90%), Positives = 163/169 (96%)
 Frame = +1

Query: 1   LRQPLWVIEELVNPLSLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDEMLQPLVDEAK 180
           LRQ LWVIEELVNPLSLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDE+LQPLVDEAK
Sbjct: 288 LRQSLWVIEELVNPLSLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDELLQPLVDEAK 347

Query: 181 VVGYSCREEWISAMVTSLSTHLAKEIFPSYITHLDEESVTGIQSSARISWLHLIDLMIAF 360
           ++GYSCREEWISAMVTSL+T+LAKEIFPSYI+ LDEESV GIQSSARISWLHLIDL IAF
Sbjct: 348 LLGYSCREEWISAMVTSLTTYLAKEIFPSYISQLDEESVIGIQSSARISWLHLIDLTIAF 407

Query: 361 DKRIKSLVEHSGISVSFDDDVILQRISSLSVFCDRPDWLDLWAEIELGE 507
           DKRIKSLVEHSGI +SFDDD I+Q+ISSLSVFCDRPDWLDLWAEIELG+
Sbjct: 408 DKRIKSLVEHSGILLSFDDD-IMQKISSLSVFCDRPDWLDLWAEIELGD 455


>ref|XP_003622992.1| RAD50-interacting protein [Medicago truncatula]
           gi|355498007|gb|AES79210.1| RAD50-interacting protein
           [Medicago truncatula]
          Length = 801

 Score =  307 bits (787), Expect = 5e-82
 Identities = 151/169 (89%), Positives = 163/169 (96%)
 Frame = +1

Query: 1   LRQPLWVIEELVNPLSLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDEMLQPLVDEAK 180
           LRQPLW IEELVNPLSLAS++HFSKWVDKPEFIFTLVYKITRDYVDS+DEMLQPLVDEAK
Sbjct: 293 LRQPLWAIEELVNPLSLASEKHFSKWVDKPEFIFTLVYKITRDYVDSVDEMLQPLVDEAK 352

Query: 181 VVGYSCREEWISAMVTSLSTHLAKEIFPSYITHLDEESVTGIQSSARISWLHLIDLMIAF 360
           VVGYSCREEWISAMVTSLST+LAKEIFPSYIT L+EES+TGIQSS+RISWLHLIDLMIAF
Sbjct: 353 VVGYSCREEWISAMVTSLSTYLAKEIFPSYITQLEEESITGIQSSSRISWLHLIDLMIAF 412

Query: 361 DKRIKSLVEHSGISVSFDDDVILQRISSLSVFCDRPDWLDLWAEIELGE 507
           DK+I SLVE+SG+ +S DDD ILQRISSLSVFCDRPDWLDLWAEIELG+
Sbjct: 413 DKKIMSLVENSGVLLSLDDD-ILQRISSLSVFCDRPDWLDLWAEIELGD 460


>ref|XP_002330095.1| predicted protein [Populus trichocarpa] gi|222871229|gb|EEF08360.1|
           predicted protein [Populus trichocarpa]
          Length = 804

 Score =  284 bits (726), Expect = 6e-75
 Identities = 132/169 (78%), Positives = 152/169 (89%)
 Frame = +1

Query: 1   LRQPLWVIEELVNPLSLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDEMLQPLVDEAK 180
           L+QPLW IEELVNP+S+A QRHFSKW+DKPEF+F LVYKITRDYVD+MDE+LQPLVDEA+
Sbjct: 295 LQQPLWAIEELVNPISIACQRHFSKWIDKPEFVFALVYKITRDYVDTMDELLQPLVDEAR 354

Query: 181 VVGYSCREEWISAMVTSLSTHLAKEIFPSYITHLDEESVTGIQSSARISWLHLIDLMIAF 360
           + GYSCREEWISAMVTSL T+LAKEIFP Y+  LD ESV+G+QS AR SWLHL+DLMIAF
Sbjct: 355 LAGYSCREEWISAMVTSLVTYLAKEIFPKYVAELDGESVSGVQSKARFSWLHLVDLMIAF 414

Query: 361 DKRIKSLVEHSGISVSFDDDVILQRISSLSVFCDRPDWLDLWAEIELGE 507
           DK+I+SLV HSGIS+S  DD  LQ+ISSLSVFCDRPDWLD+WAEIEL +
Sbjct: 415 DKQIQSLVTHSGISLSLQDDGNLQKISSLSVFCDRPDWLDIWAEIELND 463


>ref|XP_002268222.1| PREDICTED: RINT1-like protein-like [Vitis vinifera]
          Length = 800

 Score =  279 bits (714), Expect = 1e-73
 Identities = 131/169 (77%), Positives = 150/169 (88%)
 Frame = +1

Query: 1   LRQPLWVIEELVNPLSLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDEMLQPLVDEAK 180
           L QPLWVIEELVNP+SLA QRHFSKW+DKPEFIF LVYK+TRDYVDSMDE+LQPLVDEA 
Sbjct: 291 LHQPLWVIEELVNPISLAFQRHFSKWIDKPEFIFALVYKVTRDYVDSMDELLQPLVDEAM 350

Query: 181 VVGYSCREEWISAMVTSLSTHLAKEIFPSYITHLDEESVTGIQSSARISWLHLIDLMIAF 360
           + GYSCREEWISAMVTSL  +LAKEIFPSY+  LDEESVTG+QS ARI+WLHL+DLMI F
Sbjct: 351 LAGYSCREEWISAMVTSLVIYLAKEIFPSYVGQLDEESVTGVQSQARIAWLHLVDLMITF 410

Query: 361 DKRIKSLVEHSGISVSFDDDVILQRISSLSVFCDRPDWLDLWAEIELGE 507
           DKR++S++ HSG+ V   +D  LQ+ISSLSVFCDRPDWLDLWA+IEL +
Sbjct: 411 DKRVQSMLAHSGLLVFLQEDGNLQKISSLSVFCDRPDWLDLWAKIELDD 459


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