BLASTX nr result

ID: Glycyrrhiza24_contig00027929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027929
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590708.1| ATP-dependent DNA helicase pcrA [Medicago tr...   113   1e-23
ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-l...   107   1e-21
ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-l...   100   2e-19
emb|CBI38559.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|NP_001059683.1| Os07g0492100 [Oryza sativa Japonica Group] g...    97   2e-18

>ref|XP_003590708.1| ATP-dependent DNA helicase pcrA [Medicago truncatula]
           gi|355479756|gb|AES60959.1| ATP-dependent DNA helicase
           pcrA [Medicago truncatula]
          Length = 339

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/60 (91%), Positives = 58/60 (96%)
 Frame = -3

Query: 258 RSAYLMREKQEHFMKLKIENAMGSATPTVKQISYLKKLGCTMTPTSRLHASHLIEQYKSL 79
           + A+LMREKQEHF+KLKIENAMGSATPT KQISYLKKLGCTMTPTSRLHASHLIEQYKSL
Sbjct: 280 KRAHLMREKQEHFLKLKIENAMGSATPTDKQISYLKKLGCTMTPTSRLHASHLIEQYKSL 339


>ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-like [Glycine max]
          Length = 1123

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/60 (86%), Positives = 56/60 (93%)
 Frame = -3

Query: 258  RSAYLMREKQEHFMKLKIENAMGSATPTVKQISYLKKLGCTMTPTSRLHASHLIEQYKSL 79
            + A+LMREKQEHF+KLKIENAMGSATPT KQISYLKKLGCT  PTSRLHASHLIEQ+KSL
Sbjct: 1064 KRAHLMREKQEHFLKLKIENAMGSATPTDKQISYLKKLGCTAIPTSRLHASHLIEQFKSL 1123


>ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-like [Vitis vinifera]
          Length = 1113

 Score =  100 bits (248), Expect = 2e-19
 Identities = 47/60 (78%), Positives = 54/60 (90%)
 Frame = -3

Query: 258  RSAYLMREKQEHFMKLKIENAMGSATPTVKQISYLKKLGCTMTPTSRLHASHLIEQYKSL 79
            + A+LMR KQEHF+KL+IENAMGS+ PT KQISYL+ LGCT+ PTSRLHASHLIEQYKSL
Sbjct: 1054 KRAHLMRMKQEHFLKLRIENAMGSSAPTSKQISYLQNLGCTVVPTSRLHASHLIEQYKSL 1113


>emb|CBI38559.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  100 bits (248), Expect = 2e-19
 Identities = 47/60 (78%), Positives = 54/60 (90%)
 Frame = -3

Query: 258  RSAYLMREKQEHFMKLKIENAMGSATPTVKQISYLKKLGCTMTPTSRLHASHLIEQYKSL 79
            + A+LMR KQEHF+KL+IENAMGS+ PT KQISYL+ LGCT+ PTSRLHASHLIEQYKSL
Sbjct: 892  KRAHLMRMKQEHFLKLRIENAMGSSAPTSKQISYLQNLGCTVVPTSRLHASHLIEQYKSL 951


>ref|NP_001059683.1| Os07g0492100 [Oryza sativa Japonica Group]
            gi|34393626|dbj|BAC83302.1| putative ATP-dependent DNA
            helicase [Oryza sativa Japonica Group]
            gi|50508450|dbj|BAD30552.1| putative ATP-dependent DNA
            helicase [Oryza sativa Japonica Group]
            gi|113611219|dbj|BAF21597.1| Os07g0492100 [Oryza sativa
            Japonica Group] gi|218199642|gb|EEC82069.1| hypothetical
            protein OsI_26061 [Oryza sativa Indica Group]
          Length = 1165

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 44/60 (73%), Positives = 54/60 (90%)
 Frame = -3

Query: 258  RSAYLMREKQEHFMKLKIENAMGSATPTVKQISYLKKLGCTMTPTSRLHASHLIEQYKSL 79
            + ++LMRE+QEHF K +IEN+MGS+ PT KQISYL+ LGCT+TPTSRLHASHLIE+YKSL
Sbjct: 1106 KRSHLMRERQEHFQKQRIENSMGSSEPTPKQISYLRNLGCTITPTSRLHASHLIEKYKSL 1165


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