BLASTX nr result

ID: Glycyrrhiza24_contig00027908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027908
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537071.1| PREDICTED: ABC transporter B family member 2...   276   4e-72
ref|XP_002308470.1| ABC transporter family, retinal flippase sub...   234   2e-59
emb|CBI30307.3| unnamed protein product [Vitis vinifera]              230   3e-58
ref|XP_002276489.1| PREDICTED: ABC transporter B family member 2...   230   3e-58
ref|XP_002530326.1| abc transporter, putative [Ricinus communis]...   228   1e-57

>ref|XP_003537071.1| PREDICTED: ABC transporter B family member 29, chloroplastic-like
           [Glycine max]
          Length = 605

 Score =  276 bits (706), Expect = 4e-72
 Identities = 152/208 (73%), Positives = 169/208 (81%)
 Frame = -3

Query: 625 LRIRSSTRSTHTLQFLKPYLVSQHKPILCGWLCSAVSVYSLSNLLSKFSXXXXXXXXXXX 446
           L+IR+ T  T  LQFLKPYL+SQHKPILCGWLCSAVSVYSLS LLSK             
Sbjct: 32  LQIRAKTNPT--LQFLKPYLLSQHKPILCGWLCSAVSVYSLSALLSKLPKLPILSATAAD 89

Query: 445 AQGFALGGLVLTRLVATYAQHSLLWEASLNAVYNLRAHVFDRVLHRELAYFEANDAVSAG 266
           A   A   L++ RL A YAQ +LLWEA+L AVY+LR HVFDRVLHRELAYFE    VSAG
Sbjct: 90  AAPIA-ALLLVARLAAGYAQRALLWEAALGAVYDLRLHVFDRVLHRELAYFEG---VSAG 145

Query: 265 DIAYRITAEASDLGLTLYALLNTIVPSTLQLSAMIMQMLVISPVLSLISAIVIPCMVLVV 86
           D+AYRITAEASDL +TLY LLNTIVPSTLQLSAM+MQMLVISP LSLISA+++PCMVLVV
Sbjct: 146 DLAYRITAEASDLAVTLYTLLNTIVPSTLQLSAMMMQMLVISPTLSLISAMIVPCMVLVV 205

Query: 85  AFLGQELRKISKQSHISIAALSAYLNEV 2
            FLGQELRKISK++H+SIAALSAYLNEV
Sbjct: 206 TFLGQELRKISKEAHVSIAALSAYLNEV 233


>ref|XP_002308470.1| ABC transporter family, retinal flippase subfamily [Populus
           trichocarpa] gi|222854446|gb|EEE91993.1| ABC transporter
           family, retinal flippase subfamily [Populus trichocarpa]
          Length = 570

 Score =  234 bits (596), Expect = 2e-59
 Identities = 122/200 (61%), Positives = 148/200 (74%), Gaps = 4/200 (2%)
 Frame = -3

Query: 589 LQFLKPYLVSQHKPILCGWLCSAVSVYSLSNLLSKF----SXXXXXXXXXXXAQGFALGG 422
           L  +KP++ SQ+KPIL GWLCS +SV SLS L+ KF    S             G  L G
Sbjct: 1   LSIIKPFIFSQYKPILLGWLCSLLSVLSLSQLVPKFGQFSSSIGKINGVTLRNDGLVLAG 60

Query: 421 LVLTRLVATYAQHSLLWEASLNAVYNLRAHVFDRVLHRELAYFEANDAVSAGDIAYRITA 242
           L L +L+ATY QH+LLWEA+LNA Y +R  VF+RVL REL +FE   AVS+GD+AYRITA
Sbjct: 61  LFLAKLIATYGQHALLWEAALNASYKIRVFVFERVLERELGFFEGGGAVSSGDVAYRITA 120

Query: 241 EASDLGLTLYALLNTIVPSTLQLSAMIMQMLVISPVLSLISAIVIPCMVLVVAFLGQELR 62
           EA+D+  TLYALLNTIVPS LQLSAM  +MLVISP LSLISA+VIPC  L +A+LG  LR
Sbjct: 121 EAADVADTLYALLNTIVPSALQLSAMASRMLVISPALSLISAMVIPCTALAIAYLGTRLR 180

Query: 61  KISKQSHISIAALSAYLNEV 2
           KISK++ ++I+ALSAYLNEV
Sbjct: 181 KISKKAQLTISALSAYLNEV 200


>emb|CBI30307.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  230 bits (586), Expect = 3e-58
 Identities = 121/207 (58%), Positives = 154/207 (74%), Gaps = 4/207 (1%)
 Frame = -3

Query: 610 STRSTHTLQFLKPYLVSQHKPILCGWLCSAVSVYSLSNLLSKF----SXXXXXXXXXXXA 443
           S  + H+L+ +KPY++S++KPIL GW CS VSVYSLS ++ K     +            
Sbjct: 147 SPSTFHSLEAIKPYVLSEYKPILKGWFCSLVSVYSLSKIVPKVGKFSATLSKIDAIHLRD 206

Query: 442 QGFALGGLVLTRLVATYAQHSLLWEASLNAVYNLRAHVFDRVLHRELAYFEANDAVSAGD 263
           +G  LG L+L RLVA+Y Q + LW+A+LN+VY +R   FD+VL R+L +FE  DAVS GD
Sbjct: 207 EGLVLGVLLLARLVASYWQQAFLWDAALNSVYKVRVFAFDKVLQRDLEFFEGGDAVSPGD 266

Query: 262 IAYRITAEASDLGLTLYALLNTIVPSTLQLSAMIMQMLVISPVLSLISAIVIPCMVLVVA 83
           IAYR+TAEASD+  T++ALLNTIVPS LQLSAM  QML ISP LSLISA+VIP M LV+A
Sbjct: 267 IAYRMTAEASDVADTVHALLNTIVPSALQLSAMATQMLFISPTLSLISALVIPFMSLVIA 326

Query: 82  FLGQELRKISKQSHISIAALSAYLNEV 2
            LG+ LRKISK++H+SIAALSAYLNE+
Sbjct: 327 HLGERLRKISKRAHLSIAALSAYLNEI 353


>ref|XP_002276489.1| PREDICTED: ABC transporter B family member 29, chloroplastic [Vitis
           vinifera]
          Length = 630

 Score =  230 bits (586), Expect = 3e-58
 Identities = 121/207 (58%), Positives = 154/207 (74%), Gaps = 4/207 (1%)
 Frame = -3

Query: 610 STRSTHTLQFLKPYLVSQHKPILCGWLCSAVSVYSLSNLLSKF----SXXXXXXXXXXXA 443
           S  + H+L+ +KPY++S++KPIL GW CS VSVYSLS ++ K     +            
Sbjct: 53  SPSTFHSLEAIKPYVLSEYKPILKGWFCSLVSVYSLSKIVPKVGKFSATLSKIDAIHLRD 112

Query: 442 QGFALGGLVLTRLVATYAQHSLLWEASLNAVYNLRAHVFDRVLHRELAYFEANDAVSAGD 263
           +G  LG L+L RLVA+Y Q + LW+A+LN+VY +R   FD+VL R+L +FE  DAVS GD
Sbjct: 113 EGLVLGVLLLARLVASYWQQAFLWDAALNSVYKVRVFAFDKVLQRDLEFFEGGDAVSPGD 172

Query: 262 IAYRITAEASDLGLTLYALLNTIVPSTLQLSAMIMQMLVISPVLSLISAIVIPCMVLVVA 83
           IAYR+TAEASD+  T++ALLNTIVPS LQLSAM  QML ISP LSLISA+VIP M LV+A
Sbjct: 173 IAYRMTAEASDVADTVHALLNTIVPSALQLSAMATQMLFISPTLSLISALVIPFMSLVIA 232

Query: 82  FLGQELRKISKQSHISIAALSAYLNEV 2
            LG+ LRKISK++H+SIAALSAYLNE+
Sbjct: 233 HLGERLRKISKRAHLSIAALSAYLNEI 259


>ref|XP_002530326.1| abc transporter, putative [Ricinus communis]
           gi|223530130|gb|EEF32042.1| abc transporter, putative
           [Ricinus communis]
          Length = 650

 Score =  228 bits (582), Expect = 1e-57
 Identities = 120/212 (56%), Positives = 152/212 (71%), Gaps = 7/212 (3%)
 Frame = -3

Query: 616 RSSTRSTHTLQFL---KPYLVSQHKPILCGWLCSAVSVYSLSNLLSKF----SXXXXXXX 458
           + S   +HT Q L   KPY++SQ K IL GWLCS +SV SLS ++ +     +       
Sbjct: 67  QKSNSISHTFQSLSTIKPYVLSQQKTILLGWLCSVISVLSLSQIVPRIGQFSANIGKIDA 126

Query: 457 XXXXAQGFALGGLVLTRLVATYAQHSLLWEASLNAVYNLRAHVFDRVLHRELAYFEANDA 278
                +G  L  L L +L+AT+ QHSLLW+A+LNA Y +R HVF+RVL R+LA+FE    
Sbjct: 127 LRLRNEGVVLAALFLAKLIATFGQHSLLWKAALNAGYEIRVHVFERVLKRQLAFFEGGSG 186

Query: 277 VSAGDIAYRITAEASDLGLTLYALLNTIVPSTLQLSAMIMQMLVISPVLSLISAIVIPCM 98
           VS+GDIAYRITA+A+D+  TLYALLNT++PS LQLSAM  +ML ISPVLSLISA+VIPCM
Sbjct: 187 VSSGDIAYRITAQAADVSDTLYALLNTVLPSALQLSAMASRMLAISPVLSLISAMVIPCM 246

Query: 97  VLVVAFLGQELRKISKQSHISIAALSAYLNEV 2
              +A LG+ LRKISK++H+SIA LSAYLNEV
Sbjct: 247 AFAIACLGERLRKISKKAHLSIATLSAYLNEV 278


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