BLASTX nr result

ID: Glycyrrhiza24_contig00027907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027907
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532731.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37
ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containi...   149   2e-34
ref|XP_002520026.1| pentatricopeptide repeat-containing protein,...   147   7e-34
ref|XP_002325381.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
emb|CBI26526.3| unnamed protein product [Vitis vinifera]              137   9e-31

>ref|XP_003532731.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27270-like [Glycine max]
          Length = 1079

 Score =  159 bits (402), Expect = 2e-37
 Identities = 75/84 (89%), Positives = 80/84 (95%)
 Frame = -1

Query: 253 LKQAEEVFLEMLDAGCEPDEVACGTMLCSYARWGRHKAMLSFYSAVKERGIILSVAVFNF 74
           LK AEE+FLEMLD GCEPDEVACGTMLCSYARWGRHKAMLSFYSA+KERGIILSVAVFNF
Sbjct: 212 LKLAEEIFLEMLDVGCEPDEVACGTMLCSYARWGRHKAMLSFYSAIKERGIILSVAVFNF 271

Query: 73  MLSSLQKKSLHGEVVQVWRDMVGK 2
           M+SSLQKKSLH EVV VW+DM+GK
Sbjct: 272 MMSSLQKKSLHREVVHVWKDMLGK 295


>ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27270-like [Vitis vinifera]
          Length = 1071

 Score =  149 bits (377), Expect = 2e-34
 Identities = 69/84 (82%), Positives = 79/84 (94%)
 Frame = -1

Query: 253 LKQAEEVFLEMLDAGCEPDEVACGTMLCSYARWGRHKAMLSFYSAVKERGIILSVAVFNF 74
           +K AE+ FLEML+AGCEPDEVACGTMLC+YARWGRHKAMLSFYSAV+ERGII S+AVFNF
Sbjct: 208 IKLAEQAFLEMLEAGCEPDEVACGTMLCTYARWGRHKAMLSFYSAVQERGIIPSIAVFNF 267

Query: 73  MLSSLQKKSLHGEVVQVWRDMVGK 2
           MLSSLQKKSLHG+V+ +WR+MV K
Sbjct: 268 MLSSLQKKSLHGKVIDLWREMVDK 291


>ref|XP_002520026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540790|gb|EEF42350.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1040

 Score =  147 bits (372), Expect = 7e-34
 Identities = 67/84 (79%), Positives = 77/84 (91%)
 Frame = -1

Query: 253 LKQAEEVFLEMLDAGCEPDEVACGTMLCSYARWGRHKAMLSFYSAVKERGIILSVAVFNF 74
           +K AE+ FLEML+AGCEPDEVACGTMLCSYARWGRHKAM SFYSA++ERGI LSV+V+NF
Sbjct: 203 IKLAEQTFLEMLEAGCEPDEVACGTMLCSYARWGRHKAMFSFYSAIRERGITLSVSVYNF 262

Query: 73  MLSSLQKKSLHGEVVQVWRDMVGK 2
           MLSSLQKKSLHG V+++WR MV K
Sbjct: 263 MLSSLQKKSLHGRVIELWRQMVDK 286


>ref|XP_002325381.1| predicted protein [Populus trichocarpa] gi|222862256|gb|EEE99762.1|
           predicted protein [Populus trichocarpa]
          Length = 1071

 Score =  145 bits (366), Expect = 3e-33
 Identities = 65/84 (77%), Positives = 76/84 (90%)
 Frame = -1

Query: 253 LKQAEEVFLEMLDAGCEPDEVACGTMLCSYARWGRHKAMLSFYSAVKERGIILSVAVFNF 74
           +K AE+ FLEML+ GCEPDEVACGTMLCSYARWG HKAM SFYSA+KERGI++S+AV+NF
Sbjct: 203 IKLAEQTFLEMLEVGCEPDEVACGTMLCSYARWGHHKAMFSFYSAIKERGIVVSIAVYNF 262

Query: 73  MLSSLQKKSLHGEVVQVWRDMVGK 2
           MLSSLQKKSLHG+V+ +WR MV K
Sbjct: 263 MLSSLQKKSLHGKVIVLWRQMVDK 286


>emb|CBI26526.3| unnamed protein product [Vitis vinifera]
          Length = 1005

 Score =  137 bits (345), Expect = 9e-31
 Identities = 64/75 (85%), Positives = 72/75 (96%)
 Frame = -1

Query: 253 LKQAEEVFLEMLDAGCEPDEVACGTMLCSYARWGRHKAMLSFYSAVKERGIILSVAVFNF 74
           +K AE+ FLEML+AGCEPDEVACGTMLC+YARWGRHKAMLSFYSAV+ERGII S+AVFNF
Sbjct: 208 IKLAEQAFLEMLEAGCEPDEVACGTMLCTYARWGRHKAMLSFYSAVQERGIIPSIAVFNF 267

Query: 73  MLSSLQKKSLHGEVV 29
           MLSSLQKKSLHG+V+
Sbjct: 268 MLSSLQKKSLHGKVI 282


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