BLASTX nr result

ID: Glycyrrhiza24_contig00027896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027896
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540333.1| PREDICTED: putative cyclin-D6-1-like [Glycin...   140   2e-31
ref|NP_001242717.1| uncharacterized protein LOC100799951 [Glycin...   139   2e-31
ref|XP_003597084.1| Cyclin-D5-2 [Medicago truncatula] gi|3554861...   124   9e-27
ref|XP_003526300.1| PREDICTED: putative cyclin-D6-1-like [Glycin...    94   1e-17
gb|AEV41137.1| D6-type cyclin [Populus x canadensis]                   91   8e-17

>ref|XP_003540333.1| PREDICTED: putative cyclin-D6-1-like [Glycine max]
          Length = 315

 Score =  140 bits (352), Expect = 2e-31
 Identities = 69/93 (74%), Positives = 77/93 (82%), Gaps = 1/93 (1%)
 Frame = +1

Query: 4   ISDCSYVNKERVMQCYNVIQDIAREDYESIFKANSSSGTPVNVLDEHFLSLESEKTNGTN 183
           ISDCSY+NKE V+QCYNVI DI RE+YES+   NS+S TPVNVLDEHFLSLESEKTNGTN
Sbjct: 226 ISDCSYINKETVVQCYNVIHDITREEYESVLNINSTSDTPVNVLDEHFLSLESEKTNGTN 285

Query: 184 VAAPTIQEKDFKRRKVTDYGSS-TVQFSHFH*C 279
           V     QE+DFKRRK TDYG++ TV FSHFH C
Sbjct: 286 VVT---QEQDFKRRKTTDYGNNRTVPFSHFHQC 315


>ref|NP_001242717.1| uncharacterized protein LOC100799951 [Glycine max]
           gi|255634925|gb|ACU17821.1| unknown [Glycine max]
          Length = 316

 Score =  139 bits (351), Expect = 2e-31
 Identities = 69/93 (74%), Positives = 78/93 (83%), Gaps = 1/93 (1%)
 Frame = +1

Query: 4   ISDCSYVNKERVMQCYNVIQDIAREDYESIFKANSSSGTPVNVLDEHFLSLESEKTNGTN 183
           ISDCSY+NKE V+QCYNVIQDIARE+Y+S+   NS+S TPVNVLDEHFLSLESEKTNGTN
Sbjct: 226 ISDCSYINKETVVQCYNVIQDIAREEYKSVLNINSTSDTPVNVLDEHFLSLESEKTNGTN 285

Query: 184 VAAPTIQEKDFKRRKVTDYGSS-TVQFSHFH*C 279
           V     QE+DFKRRK TDYG++  V FSHFH C
Sbjct: 286 VV--VTQEQDFKRRKTTDYGNNRRVPFSHFHQC 316


>ref|XP_003597084.1| Cyclin-D5-2 [Medicago truncatula] gi|355486132|gb|AES67335.1|
           Cyclin-D5-2 [Medicago truncatula]
          Length = 302

 Score =  124 bits (311), Expect = 9e-27
 Identities = 62/77 (80%), Positives = 70/77 (90%), Gaps = 1/77 (1%)
 Frame = +1

Query: 4   ISDCSYVNKERVMQCYNVIQDIAREDYESIFKANSSSGTPVNVLDEHFLSLESEKTNGTN 183
           IS+CSYVNKE VM+CYNVIQDIA+E+YES+F  +SSSGTPVNVLDE+FLSLESEKTNGTN
Sbjct: 226 ISNCSYVNKESVMECYNVIQDIAKEEYESMFNVHSSSGTPVNVLDENFLSLESEKTNGTN 285

Query: 184 VAAPT-IQEKDFKRRKV 231
           VA  T IQEK FKRRK+
Sbjct: 286 VAHTTMIQEKHFKRRKI 302


>ref|XP_003526300.1| PREDICTED: putative cyclin-D6-1-like [Glycine max]
          Length = 329

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 56/101 (55%), Positives = 64/101 (63%), Gaps = 13/101 (12%)
 Frame = +1

Query: 4   ISDCSYVNKERVMQCYNVIQDIA-REDYESIFKANSSSGTPVNVLDEHFLSLESEKTNGT 180
           ISD SYVNKE V QCY VIQDIA  E+Y S     SSS TP+NVLD HFLS ES+KTNG 
Sbjct: 223 ISDSSYVNKESVEQCYKVIQDIAIEEEYSSALNGVSSSDTPINVLDHHFLSSESQKTNGI 282

Query: 181 NVA---APTIQEKDFKRRKVTDYG---------SSTVQFSH 267
            VA   A +   +D KRRK+T  G         +S +QFSH
Sbjct: 283 TVANTIAVSSPLRDLKRRKITGCGCGGNNPTIHNSRIQFSH 323


>gb|AEV41137.1| D6-type cyclin [Populus x canadensis]
          Length = 324

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 52/96 (54%), Positives = 63/96 (65%), Gaps = 7/96 (7%)
 Frame = +1

Query: 4   ISDCSYVNKERVMQCYNVIQDIAREDYESIFKANSSSGTPVNVLDEHFLSLESEKTNGTN 183
           IS CS+VNKE ++QCYN +Q+ A + Y+S F   SSS TPVNVLD HFLS ESE TNGT 
Sbjct: 221 ISICSHVNKENLLQCYNAMQETAMDGYKSQFDMVSSSDTPVNVLDRHFLSSESENTNGTV 280

Query: 184 V------AAPTIQEKDFKRRKVTDY-GSSTVQFSHF 270
           V      +  T  EKD KRRK++    + TVQ S F
Sbjct: 281 VMISSDGSNKTWPEKDIKRRKISALCNNQTVQLSAF 316


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