BLASTX nr result

ID: Glycyrrhiza24_contig00027882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027882
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552811.1| PREDICTED: U3 small nucleolar RNA-associated...   259   1e-67
ref|XP_003601650.1| Small subunit processome component-like prot...   248   5e-64
ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255...   194   6e-48
emb|CBI17281.3| unnamed protein product [Vitis vinifera]              194   6e-48
emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera]   194   6e-48

>ref|XP_003552811.1| PREDICTED: U3 small nucleolar RNA-associated protein 20-like [Glycine
            max]
          Length = 2653

 Score =  259 bits (663), Expect = 1e-67
 Identities = 127/146 (86%), Positives = 135/146 (92%)
 Frame = +1

Query: 4    DLCFAKDLEDIWEAICEMLLHPHSWIRNRSVRLTALYFARVTDVSRENHQSSLSSCFIMN 183
            DLCFAK LEDIWEAI EMLLHPHSWIRNRSVRL ALYFAR TDVSRE + SSL S FIM+
Sbjct: 2340 DLCFAKYLEDIWEAISEMLLHPHSWIRNRSVRLVALYFARATDVSRETNGSSLRSYFIMS 2399

Query: 184  PSRLFLIATSLCCQLKMPLIDDADSNLMTQNIVFAICGVHSLLGKTACIDPPAFWSTLEQ 363
            PSRLFLIATSLCCQLKMP I+DADS+LMTQNIVFAICGVHSL+G+ ACIDPPAFWSTLEQ
Sbjct: 2400 PSRLFLIATSLCCQLKMPFINDADSSLMTQNIVFAICGVHSLMGQNACIDPPAFWSTLEQ 2459

Query: 364  HEKDQFLKAFDLIDSRKGRSMFMSSS 441
             EKD+FLKAFDL+DSRKGRSMFMSSS
Sbjct: 2460 QEKDRFLKAFDLLDSRKGRSMFMSSS 2485


>ref|XP_003601650.1| Small subunit processome component-like protein [Medicago truncatula]
            gi|355490698|gb|AES71901.1| Small subunit processome
            component-like protein [Medicago truncatula]
          Length = 2733

 Score =  248 bits (632), Expect = 5e-64
 Identities = 122/148 (82%), Positives = 133/148 (89%)
 Frame = +1

Query: 1    HDLCFAKDLEDIWEAICEMLLHPHSWIRNRSVRLTALYFARVTDVSRENHQSSLSSCFIM 180
            HD CFAK LEDIWEAICEMLLHPHSW+RN+SVRL ALYFA V  V+ EN QSS SS F+M
Sbjct: 2414 HDECFAKHLEDIWEAICEMLLHPHSWLRNKSVRLIALYFAHV--VNSENDQSSTSSYFMM 2471

Query: 181  NPSRLFLIATSLCCQLKMPLIDDADSNLMTQNIVFAICGVHSLLGKTACIDPPAFWSTLE 360
             PSRL+LIATSLCCQLKMPLIDDADSNLMTQNIVFAIC VHSL+ +TACIDPPAFWS LE
Sbjct: 2472 TPSRLYLIATSLCCQLKMPLIDDADSNLMTQNIVFAICRVHSLMRQTACIDPPAFWSALE 2531

Query: 361  QHEKDQFLKAFDLIDSRKGRSMFMSSSL 444
            QHEKD+FLKAFDLI++RK RSMF+SSSL
Sbjct: 2532 QHEKDRFLKAFDLINARKERSMFVSSSL 2559


>ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255444 [Vitis vinifera]
          Length = 3196

 Score =  194 bits (493), Expect = 6e-48
 Identities = 87/145 (60%), Positives = 111/145 (76%)
 Frame = +1

Query: 1    HDLCFAKDLEDIWEAICEMLLHPHSWIRNRSVRLTALYFARVTDVSRENHQSSLSSCFIM 180
            H+LC  ++LEDIWE IC+ LLHPH W+RN S RL A YF  V + +RE ++ S+ +  ++
Sbjct: 1884 HELCLQRELEDIWEVICDFLLHPHMWLRNISSRLVAFYFTAVNEANREKNEKSIETFSLV 1943

Query: 181  NPSRLFLIATSLCCQLKMPLIDDADSNLMTQNIVFAICGVHSLLGKTACIDPPAFWSTLE 360
             PSRLF+IA SLCCQLK  L DDA SNL+TQN+VFAICGVHS +G+   +DP  FWS +E
Sbjct: 1944 RPSRLFMIAVSLCCQLKAQLADDAASNLITQNLVFAICGVHSFVGQKEHVDPHQFWSAIE 2003

Query: 361  QHEKDQFLKAFDLIDSRKGRSMFMS 435
            QHE++ FLKAF L+DSRKGRS+F S
Sbjct: 2004 QHEQEHFLKAFQLLDSRKGRSIFES 2028


>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
          Length = 2629

 Score =  194 bits (493), Expect = 6e-48
 Identities = 87/145 (60%), Positives = 111/145 (76%)
 Frame = +1

Query: 1    HDLCFAKDLEDIWEAICEMLLHPHSWIRNRSVRLTALYFARVTDVSRENHQSSLSSCFIM 180
            H+LC  ++LEDIWE IC+ LLHPH W+RN S RL A YF  V + +RE ++ S+ +  ++
Sbjct: 2315 HELCLQRELEDIWEVICDFLLHPHMWLRNISSRLVAFYFTAVNEANREKNEKSIETFSLV 2374

Query: 181  NPSRLFLIATSLCCQLKMPLIDDADSNLMTQNIVFAICGVHSLLGKTACIDPPAFWSTLE 360
             PSRLF+IA SLCCQLK  L DDA SNL+TQN+VFAICGVHS +G+   +DP  FWS +E
Sbjct: 2375 RPSRLFMIAVSLCCQLKAQLADDAASNLITQNLVFAICGVHSFVGQKEHVDPHQFWSAIE 2434

Query: 361  QHEKDQFLKAFDLIDSRKGRSMFMS 435
            QHE++ FLKAF L+DSRKGRS+F S
Sbjct: 2435 QHEQEHFLKAFQLLDSRKGRSIFES 2459


>emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera]
          Length = 2461

 Score =  194 bits (493), Expect = 6e-48
 Identities = 87/145 (60%), Positives = 111/145 (76%)
 Frame = +1

Query: 1    HDLCFAKDLEDIWEAICEMLLHPHSWIRNRSVRLTALYFARVTDVSRENHQSSLSSCFIM 180
            H+LC  ++LEDIWE IC+ LLHPH W+RN S RL A YF  V + +RE ++ S+ +  ++
Sbjct: 2147 HELCLQRELEDIWEVICDFLLHPHMWLRNISSRLVAFYFTAVNEANREKNEKSIETFSLV 2206

Query: 181  NPSRLFLIATSLCCQLKMPLIDDADSNLMTQNIVFAICGVHSLLGKTACIDPPAFWSTLE 360
             PSRLF+IA SLCCQLK  L DDA SNL+TQN+VFAICGVHS +G+   +DP  FWS +E
Sbjct: 2207 RPSRLFMIAVSLCCQLKAQLADDAASNLITQNLVFAICGVHSFVGQKEHVDPHQFWSAIE 2266

Query: 361  QHEKDQFLKAFDLIDSRKGRSMFMS 435
            QHE++ FLKAF L+DSRKGRS+F S
Sbjct: 2267 QHEQEHFLKAFQLLDSRKGRSIFES 2291


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