BLASTX nr result
ID: Glycyrrhiza24_contig00027882
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00027882 (445 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003552811.1| PREDICTED: U3 small nucleolar RNA-associated... 259 1e-67 ref|XP_003601650.1| Small subunit processome component-like prot... 248 5e-64 ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255... 194 6e-48 emb|CBI17281.3| unnamed protein product [Vitis vinifera] 194 6e-48 emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera] 194 6e-48 >ref|XP_003552811.1| PREDICTED: U3 small nucleolar RNA-associated protein 20-like [Glycine max] Length = 2653 Score = 259 bits (663), Expect = 1e-67 Identities = 127/146 (86%), Positives = 135/146 (92%) Frame = +1 Query: 4 DLCFAKDLEDIWEAICEMLLHPHSWIRNRSVRLTALYFARVTDVSRENHQSSLSSCFIMN 183 DLCFAK LEDIWEAI EMLLHPHSWIRNRSVRL ALYFAR TDVSRE + SSL S FIM+ Sbjct: 2340 DLCFAKYLEDIWEAISEMLLHPHSWIRNRSVRLVALYFARATDVSRETNGSSLRSYFIMS 2399 Query: 184 PSRLFLIATSLCCQLKMPLIDDADSNLMTQNIVFAICGVHSLLGKTACIDPPAFWSTLEQ 363 PSRLFLIATSLCCQLKMP I+DADS+LMTQNIVFAICGVHSL+G+ ACIDPPAFWSTLEQ Sbjct: 2400 PSRLFLIATSLCCQLKMPFINDADSSLMTQNIVFAICGVHSLMGQNACIDPPAFWSTLEQ 2459 Query: 364 HEKDQFLKAFDLIDSRKGRSMFMSSS 441 EKD+FLKAFDL+DSRKGRSMFMSSS Sbjct: 2460 QEKDRFLKAFDLLDSRKGRSMFMSSS 2485 >ref|XP_003601650.1| Small subunit processome component-like protein [Medicago truncatula] gi|355490698|gb|AES71901.1| Small subunit processome component-like protein [Medicago truncatula] Length = 2733 Score = 248 bits (632), Expect = 5e-64 Identities = 122/148 (82%), Positives = 133/148 (89%) Frame = +1 Query: 1 HDLCFAKDLEDIWEAICEMLLHPHSWIRNRSVRLTALYFARVTDVSRENHQSSLSSCFIM 180 HD CFAK LEDIWEAICEMLLHPHSW+RN+SVRL ALYFA V V+ EN QSS SS F+M Sbjct: 2414 HDECFAKHLEDIWEAICEMLLHPHSWLRNKSVRLIALYFAHV--VNSENDQSSTSSYFMM 2471 Query: 181 NPSRLFLIATSLCCQLKMPLIDDADSNLMTQNIVFAICGVHSLLGKTACIDPPAFWSTLE 360 PSRL+LIATSLCCQLKMPLIDDADSNLMTQNIVFAIC VHSL+ +TACIDPPAFWS LE Sbjct: 2472 TPSRLYLIATSLCCQLKMPLIDDADSNLMTQNIVFAICRVHSLMRQTACIDPPAFWSALE 2531 Query: 361 QHEKDQFLKAFDLIDSRKGRSMFMSSSL 444 QHEKD+FLKAFDLI++RK RSMF+SSSL Sbjct: 2532 QHEKDRFLKAFDLINARKERSMFVSSSL 2559 >ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255444 [Vitis vinifera] Length = 3196 Score = 194 bits (493), Expect = 6e-48 Identities = 87/145 (60%), Positives = 111/145 (76%) Frame = +1 Query: 1 HDLCFAKDLEDIWEAICEMLLHPHSWIRNRSVRLTALYFARVTDVSRENHQSSLSSCFIM 180 H+LC ++LEDIWE IC+ LLHPH W+RN S RL A YF V + +RE ++ S+ + ++ Sbjct: 1884 HELCLQRELEDIWEVICDFLLHPHMWLRNISSRLVAFYFTAVNEANREKNEKSIETFSLV 1943 Query: 181 NPSRLFLIATSLCCQLKMPLIDDADSNLMTQNIVFAICGVHSLLGKTACIDPPAFWSTLE 360 PSRLF+IA SLCCQLK L DDA SNL+TQN+VFAICGVHS +G+ +DP FWS +E Sbjct: 1944 RPSRLFMIAVSLCCQLKAQLADDAASNLITQNLVFAICGVHSFVGQKEHVDPHQFWSAIE 2003 Query: 361 QHEKDQFLKAFDLIDSRKGRSMFMS 435 QHE++ FLKAF L+DSRKGRS+F S Sbjct: 2004 QHEQEHFLKAFQLLDSRKGRSIFES 2028 >emb|CBI17281.3| unnamed protein product [Vitis vinifera] Length = 2629 Score = 194 bits (493), Expect = 6e-48 Identities = 87/145 (60%), Positives = 111/145 (76%) Frame = +1 Query: 1 HDLCFAKDLEDIWEAICEMLLHPHSWIRNRSVRLTALYFARVTDVSRENHQSSLSSCFIM 180 H+LC ++LEDIWE IC+ LLHPH W+RN S RL A YF V + +RE ++ S+ + ++ Sbjct: 2315 HELCLQRELEDIWEVICDFLLHPHMWLRNISSRLVAFYFTAVNEANREKNEKSIETFSLV 2374 Query: 181 NPSRLFLIATSLCCQLKMPLIDDADSNLMTQNIVFAICGVHSLLGKTACIDPPAFWSTLE 360 PSRLF+IA SLCCQLK L DDA SNL+TQN+VFAICGVHS +G+ +DP FWS +E Sbjct: 2375 RPSRLFMIAVSLCCQLKAQLADDAASNLITQNLVFAICGVHSFVGQKEHVDPHQFWSAIE 2434 Query: 361 QHEKDQFLKAFDLIDSRKGRSMFMS 435 QHE++ FLKAF L+DSRKGRS+F S Sbjct: 2435 QHEQEHFLKAFQLLDSRKGRSIFES 2459 >emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera] Length = 2461 Score = 194 bits (493), Expect = 6e-48 Identities = 87/145 (60%), Positives = 111/145 (76%) Frame = +1 Query: 1 HDLCFAKDLEDIWEAICEMLLHPHSWIRNRSVRLTALYFARVTDVSRENHQSSLSSCFIM 180 H+LC ++LEDIWE IC+ LLHPH W+RN S RL A YF V + +RE ++ S+ + ++ Sbjct: 2147 HELCLQRELEDIWEVICDFLLHPHMWLRNISSRLVAFYFTAVNEANREKNEKSIETFSLV 2206 Query: 181 NPSRLFLIATSLCCQLKMPLIDDADSNLMTQNIVFAICGVHSLLGKTACIDPPAFWSTLE 360 PSRLF+IA SLCCQLK L DDA SNL+TQN+VFAICGVHS +G+ +DP FWS +E Sbjct: 2207 RPSRLFMIAVSLCCQLKAQLADDAASNLITQNLVFAICGVHSFVGQKEHVDPHQFWSAIE 2266 Query: 361 QHEKDQFLKAFDLIDSRKGRSMFMS 435 QHE++ FLKAF L+DSRKGRS+F S Sbjct: 2267 QHEQEHFLKAFQLLDSRKGRSIFES 2291