BLASTX nr result

ID: Glycyrrhiza24_contig00027874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027874
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602634.1| hypothetical protein MTR_3g096450 [Medicago ...    97   1e-18
ref|XP_003528054.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16

>ref|XP_003602634.1| hypothetical protein MTR_3g096450 [Medicago truncatula]
           gi|355491682|gb|AES72885.1| hypothetical protein
           MTR_3g096450 [Medicago truncatula]
          Length = 245

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 73/154 (47%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
 Frame = +3

Query: 6   GDREFSFWGSSNTTITSSENDCDQ---QPRGNETIPNRKDFKFEEHCAIVSDPSSSRSKA 176
           G +EFSFW S NT I S E  CD    Q R NET    ++      C+IVS+PS  RSK 
Sbjct: 17  GSKEFSFWTSPNTIIKSLEK-CDGHDIQLRSNET----QELNNHHQCSIVSEPS--RSKD 69

Query: 177 IAEGRKELMEKIMQDMPESSYELSFQDMVVEPEVQDQNETFSDNTLKQRSSSSETQQQPQ 356
           I EG+KELME I QDMPESSYELSFQDMVVE     + ET                QQPQ
Sbjct: 70  ILEGKKELMEMI-QDMPESSYELSFQDMVVEQHQVPETET---------EPVYSKFQQPQ 119

Query: 357 HXXXXXXXXXXXXXXXXXXSNRPGQVLRVESMDS 458
                              SNR G++LRVESMDS
Sbjct: 120 Q---KKLNKNKKKNKKENKSNRHGKMLRVESMDS 150


>ref|XP_003528054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 737

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 60/119 (50%), Positives = 74/119 (62%), Gaps = 7/119 (5%)
 Frame = +3

Query: 123 FEEHCAIVSDPSSSRSKAIAEGRKELMEKIMQDMPESSYELSFQDMVV------EPEVQ- 281
           +++    +SDPS  RSKAI+EG++ELME +MQDMPES YELSFQDMVV      EPE Q 
Sbjct: 532 YDDDFYFISDPS--RSKAISEGQRELME-MMQDMPESGYELSFQDMVVHEKQVLEPEQQP 588

Query: 282 DQNETFSDNTLKQRSSSSETQQQPQHXXXXXXXXXXXXXXXXXXSNRPGQVLRVESMDS 458
            QNET  +NTL Q SS ++ Q +                     S+RPGQ+LRVESMDS
Sbjct: 589 HQNETSLENTLMQSSSGNKAQLK----------RVSKKKKNKGNSSRPGQILRVESMDS 637


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