BLASTX nr result

ID: Glycyrrhiza24_contig00027871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027871
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551779.1| PREDICTED: auxin transport protein BIG-like ...   176   2e-42
ref|XP_003621559.1| E3 ubiquitin-protein ligase UBR4 [Medicago t...   166   2e-39
gb|ABN07919.1| Zinc finger, N-recognin; WD40-like [Medicago trun...   166   2e-39
ref|XP_003633742.1| PREDICTED: LOW QUALITY PROTEIN: auxin transp...    89   4e-16
emb|CBI16927.3| unnamed protein product [Vitis vinifera]               89   4e-16

>ref|XP_003551779.1| PREDICTED: auxin transport protein BIG-like [Glycine max]
          Length = 5112

 Score =  176 bits (446), Expect = 2e-42
 Identities = 81/111 (72%), Positives = 94/111 (84%)
 Frame = +3

Query: 6    NALPIPEEIEELGWYFLRSGMWLSLVLSFTNVGIWRYCMDNAISGHGLTWTGNAFGDEKY 185
            +ALPIP+ IE+LGWYFLRSGMWLSLV+SF NVGIWRYCMDNAISGHGLTWTGNA GD+KY
Sbjct: 960  DALPIPKGIEQLGWYFLRSGMWLSLVISFINVGIWRYCMDNAISGHGLTWTGNALGDDKY 1019

Query: 186  VELAGSMISSMVDSGQXXXXXXXXXXXXNKHVQVCQKAFLDVLSYKQKVAP 338
            V++AGSMISSM++SGQ            NKH+QVCQ AFLD+L+ KQK+AP
Sbjct: 1020 VKVAGSMISSMIESGQFALLVKLFSSLLNKHLQVCQNAFLDILNDKQKLAP 1070


>ref|XP_003621559.1| E3 ubiquitin-protein ligase UBR4 [Medicago truncatula]
            gi|355496574|gb|AES77777.1| E3 ubiquitin-protein ligase
            UBR4 [Medicago truncatula]
          Length = 5158

 Score =  166 bits (419), Expect = 2e-39
 Identities = 82/112 (73%), Positives = 91/112 (81%)
 Frame = +3

Query: 3    LNALPIPEEIEELGWYFLRSGMWLSLVLSFTNVGIWRYCMDNAISGHGLTWTGNAFGDEK 182
            L+ALPIPE IEELGW FLRS MWLSLVLSFTNVGIWRYC+D AISGH LTWT +AFGDEK
Sbjct: 1015 LDALPIPEGIEELGWDFLRSEMWLSLVLSFTNVGIWRYCIDTAISGHVLTWTESAFGDEK 1074

Query: 183  YVELAGSMISSMVDSGQXXXXXXXXXXXXNKHVQVCQKAFLDVLSYKQKVAP 338
            Y +LAGS+ISSM+DSGQ            +K VQ+ Q+AFLDVLSYKQKVAP
Sbjct: 1075 YFKLAGSVISSMIDSGQFVLLVRLFSSLLSKRVQIYQRAFLDVLSYKQKVAP 1126


>gb|ABN07919.1| Zinc finger, N-recognin; WD40-like [Medicago truncatula]
          Length = 2165

 Score =  166 bits (419), Expect = 2e-39
 Identities = 82/112 (73%), Positives = 91/112 (81%)
 Frame = +3

Query: 3    LNALPIPEEIEELGWYFLRSGMWLSLVLSFTNVGIWRYCMDNAISGHGLTWTGNAFGDEK 182
            L+ALPIPE IEELGW FLRS MWLSLVLSFTNVGIWRYC+D AISGH LTWT +AFGDEK
Sbjct: 899  LDALPIPEGIEELGWDFLRSEMWLSLVLSFTNVGIWRYCIDTAISGHVLTWTESAFGDEK 958

Query: 183  YVELAGSMISSMVDSGQXXXXXXXXXXXXNKHVQVCQKAFLDVLSYKQKVAP 338
            Y +LAGS+ISSM+DSGQ            +K VQ+ Q+AFLDVLSYKQKVAP
Sbjct: 959  YFKLAGSVISSMIDSGQFVLLVRLFSSLLSKRVQIYQRAFLDVLSYKQKVAP 1010


>ref|XP_003633742.1| PREDICTED: LOW QUALITY PROTEIN: auxin transport protein BIG-like
            [Vitis vinifera]
          Length = 6279

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/108 (41%), Positives = 65/108 (60%)
 Frame = +3

Query: 3    LNALPIPEEIEELGWYFLRSGMWLSLVLSFTNVGIWRYCMDNAISGHGLTWTGNAFGDEK 182
            L+A+ I ++IE+LGW FLR+GMWLSLVLS    GI  YC+ N++ G G      A  D +
Sbjct: 2112 LHAVHITDDIEDLGWDFLRNGMWLSLVLSLLQTGIGEYCLKNSVPGMGPISPEYASSDNE 2171

Query: 183  YVELAGSMISSMVDSGQXXXXXXXXXXXXNKHVQVCQKAFLDVLSYKQ 326
            Y+ LA  +ISS++++GQ            N+++Q  QKAFL  +   Q
Sbjct: 2172 YLTLAEGLISSLLEAGQVAKVSRILSSFLNRYLQAYQKAFLSTIDNGQ 2219


>emb|CBI16927.3| unnamed protein product [Vitis vinifera]
          Length = 4380

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/108 (41%), Positives = 65/108 (60%)
 Frame = +3

Query: 3    LNALPIPEEIEELGWYFLRSGMWLSLVLSFTNVGIWRYCMDNAISGHGLTWTGNAFGDEK 182
            L+A+ I ++IE+LGW FLR+GMWLSLVLS    GI  YC+ N++ G G      A  D +
Sbjct: 925  LHAVHITDDIEDLGWDFLRNGMWLSLVLSLLQTGIGEYCLKNSVPGMGPISPEYASSDNE 984

Query: 183  YVELAGSMISSMVDSGQXXXXXXXXXXXXNKHVQVCQKAFLDVLSYKQ 326
            Y+ LA  +ISS++++GQ            N+++Q  QKAFL  +   Q
Sbjct: 985  YLTLAEGLISSLLEAGQVAKVSRILSSFLNRYLQAYQKAFLSTIDNGQ 1032


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