BLASTX nr result
ID: Glycyrrhiza24_contig00027831
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00027831
(1209 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003516464.1| PREDICTED: probable ATP-dependent RNA helica... 518 e-144
ref|XP_003521949.1| PREDICTED: probable ATP-dependent RNA helica... 509 e-142
ref|XP_003609690.1| Pre-mRNA-splicing factor ATP-dependent RNA h... 491 e-136
ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA h... 484 e-134
ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica... 342 1e-91
>ref|XP_003516464.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Glycine
max]
Length = 1403
Score = 518 bits (1333), Expect = e-144
Identities = 252/293 (86%), Positives = 273/293 (93%), Gaps = 1/293 (0%)
Frame = +1
Query: 1 ELSWQVSSAQYPLSLVKERLICQAICAGWADRVAKRITPS-RAADGEKSSRAIKYQSCTV 177
E +WQ SS +YPLSLV+ERLICQAICAGWADRVAKRIT S RA+DGEK+S A+KYQS V
Sbjct: 1112 ERAWQASSEKYPLSLVEERLICQAICAGWADRVAKRITASSRASDGEKTSHALKYQSSMV 1171
Query: 178 EESILLHRWSSVSTVGPEFLVYNELLETKRPNKEGVTSAKRAYMHGVTSVEPAWLVEHAK 357
+ES+ LHRWSS S VGPEFLVYNELLETKRPNKEG+TSAKRAYMHGVTSVEPAWLVE+AK
Sbjct: 1172 DESVFLHRWSSASIVGPEFLVYNELLETKRPNKEGITSAKRAYMHGVTSVEPAWLVENAK 1231
Query: 358 SSCIFSPPLTDPRPFYDAQTDQVKHWIVPTFGRFCWELPKHSLPISNDEHRVQVFAYALL 537
SSCIFSPPLTDPRP+YDA+TDQVK W++PTFGRFCWELPKHSLPISNDEH+VQVFAYALL
Sbjct: 1232 SSCIFSPPLTDPRPYYDARTDQVKCWVIPTFGRFCWELPKHSLPISNDEHQVQVFAYALL 1291
Query: 538 EGQVCPCLKSVRKYMSAPPESILKREAFGQKRVGNLLSKLKSRLIDSSAMLRMVWKDNPR 717
EGQVCPCLKSVRKYMSAPPESI+KREAFGQKRVGNLLSKLKSRLIDSSAMLRMVWK+NPR
Sbjct: 1292 EGQVCPCLKSVRKYMSAPPESIMKREAFGQKRVGNLLSKLKSRLIDSSAMLRMVWKENPR 1351
Query: 718 ELFSEILDWFQQSFHKHFEELWLQMLNEVLLETQDHRLCRSFKRKLKGKSKTL 876
ELFSEILDWFQQSFHKHFEELWLQMLNEVL+E Q+ L +S K+K KGK K L
Sbjct: 1352 ELFSEILDWFQQSFHKHFEELWLQMLNEVLMEKQESPLHKSSKKK-KGKYKPL 1403
>ref|XP_003521949.1| PREDICTED: probable ATP-dependent RNA helicase DHR1-like [Glycine
max]
Length = 1380
Score = 509 bits (1312), Expect = e-142
Identities = 249/294 (84%), Positives = 270/294 (91%), Gaps = 1/294 (0%)
Frame = +1
Query: 1 ELSWQVSSAQYPLSLVKERLICQAICAGWADRVAKRITPS-RAADGEKSSRAIKYQSCTV 177
E WQ SS +YPLSLV+ERLICQAICAGWADRVAKRIT S RA+DGE +SRA+KYQS V
Sbjct: 1088 ERVWQASSEKYPLSLVEERLICQAICAGWADRVAKRITASSRASDGENTSRALKYQSSMV 1147
Query: 178 EESILLHRWSSVSTVGPEFLVYNELLETKRPNKEGVTSAKRAYMHGVTSVEPAWLVEHAK 357
+ES+ LHRWSS S VGPEFLVYNELLETKRPNKEG+TSAKRAYMHGVTSVEPAWLVEHAK
Sbjct: 1148 DESVFLHRWSSASIVGPEFLVYNELLETKRPNKEGITSAKRAYMHGVTSVEPAWLVEHAK 1207
Query: 358 SSCIFSPPLTDPRPFYDAQTDQVKHWIVPTFGRFCWELPKHSLPISNDEHRVQVFAYALL 537
SSCIFSPPL DPRP+YDAQTDQVK W++PTFGRFCWELPKHSL ISNDEHRVQVFAYALL
Sbjct: 1208 SSCIFSPPLMDPRPYYDAQTDQVKCWVIPTFGRFCWELPKHSLSISNDEHRVQVFAYALL 1267
Query: 538 EGQVCPCLKSVRKYMSAPPESILKREAFGQKRVGNLLSKLKSRLIDSSAMLRMVWKDNPR 717
EGQVCPCLKSVRKYMSA PESI+KREA GQKRVGNLLSKLKSRLIDSSAMLRMVWK+NPR
Sbjct: 1268 EGQVCPCLKSVRKYMSAAPESIMKREALGQKRVGNLLSKLKSRLIDSSAMLRMVWKENPR 1327
Query: 718 ELFSEILDWFQQSFHKHFEELWLQMLNEVLLETQDHRLCRSFKRKLKGKSKTLQ 879
ELFSEILDWFQQSFHKHFEELWLQM+NE+L+E Q+ L +S K+K K KSK+L+
Sbjct: 1328 ELFSEILDWFQQSFHKHFEELWLQMVNELLMEKQERPLHKSSKKK-KVKSKSLR 1380
>ref|XP_003609690.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 [Medicago
truncatula] gi|355510745|gb|AES91887.1| Pre-mRNA-splicing
factor ATP-dependent RNA helicase prp16 [Medicago
truncatula]
Length = 1256
Score = 491 bits (1265), Expect = e-136
Identities = 238/287 (82%), Positives = 257/287 (89%)
Frame = +1
Query: 10 WQVSSAQYPLSLVKERLICQAICAGWADRVAKRITPSRAADGEKSSRAIKYQSCTVEESI 189
W+VSSA YPL LV+ERLIC+AICAGWADRVAKRI S+A DGE SRA +YQSC V+ESI
Sbjct: 967 WRVSSAHYPLPLVEERLICRAICAGWADRVAKRIPISKAVDGETISRAGRYQSCMVDESI 1026
Query: 190 LLHRWSSVSTVGPEFLVYNELLETKRPNKEGVTSAKRAYMHGVTSVEPAWLVEHAKSSCI 369
+HRWSSVSTV PEFLVYNELLETKRPNKEG TSAKRAYMHGVT+V+P WLVE+AKSSCI
Sbjct: 1027 FIHRWSSVSTVHPEFLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVENAKSSCI 1086
Query: 370 FSPPLTDPRPFYDAQTDQVKHWIVPTFGRFCWELPKHSLPISNDEHRVQVFAYALLEGQV 549
FSPPLTDPRPFYDAQ DQVK W++PTFGRFCWELPKHS+PISN EHRVQVFAYALLEGQV
Sbjct: 1087 FSPPLTDPRPFYDAQADQVKCWVIPTFGRFCWELPKHSIPISNVEHRVQVFAYALLEGQV 1146
Query: 550 CPCLKSVRKYMSAPPESILKREAFGQKRVGNLLSKLKSRLIDSSAMLRMVWKDNPRELFS 729
C CLKSVRKYMSAPPE+IL+REA GQKRVGNL+SKL SRLIDSSAMLR+VWK NPRELFS
Sbjct: 1147 CTCLKSVRKYMSAPPETILRREALGQKRVGNLISKLNSRLIDSSAMLRIVWKQNPRELFS 1206
Query: 730 EILDWFQQSFHKHFEELWLQMLNEVLLETQDHRLCRSFKRKLKGKSK 870
EILDWFQQ F KHFEELWLQML EVL ETQ+ L +S KRK K KSK
Sbjct: 1207 EILDWFQQGFRKHFEELWLQMLGEVLQETQEQPLHKSLKRKSKVKSK 1253
>ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago
truncatula] gi|355506130|gb|AES87272.1| Pre-mRNA-splicing
factor ATP-dependent RNA helicase PRP16 [Medicago
truncatula]
Length = 1331
Score = 484 bits (1246), Expect = e-134
Identities = 236/294 (80%), Positives = 260/294 (88%), Gaps = 1/294 (0%)
Frame = +1
Query: 1 ELSWQVSSAQYPLSLVKERLICQAICAGWADRVAKRIT-PSRAADGEKSSRAIKYQSCTV 177
E +W+VSSA YPL LV+ERLIC+AICAGWADRVAKRI S+ DG SRA +YQSC V
Sbjct: 1038 EHAWRVSSAHYPLPLVEERLICRAICAGWADRVAKRIPISSKTDDGVTISRAGRYQSCMV 1097
Query: 178 EESILLHRWSSVSTVGPEFLVYNELLETKRPNKEGVTSAKRAYMHGVTSVEPAWLVEHAK 357
+ESI +HRWSSVSTV PEFLVYNELLETKRPNKEG TSAKRAYMHGVT+V+P WLVE+AK
Sbjct: 1098 DESIFIHRWSSVSTVRPEFLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVENAK 1157
Query: 358 SSCIFSPPLTDPRPFYDAQTDQVKHWIVPTFGRFCWELPKHSLPISNDEHRVQVFAYALL 537
SSCIFSPPLTDPRPFYDAQ DQVK W++PTFGRFCWELPKHS+PISN EHRVQVFAYALL
Sbjct: 1158 SSCIFSPPLTDPRPFYDAQADQVKCWVIPTFGRFCWELPKHSIPISNVEHRVQVFAYALL 1217
Query: 538 EGQVCPCLKSVRKYMSAPPESILKREAFGQKRVGNLLSKLKSRLIDSSAMLRMVWKDNPR 717
EGQVCPCLK+VRKYMSAPPE+IL+RE+FGQKRVGNL+SKL SRLIDSSA LR+VWK NPR
Sbjct: 1218 EGQVCPCLKTVRKYMSAPPETILRRESFGQKRVGNLISKLNSRLIDSSATLRIVWKQNPR 1277
Query: 718 ELFSEILDWFQQSFHKHFEELWLQMLNEVLLETQDHRLCRSFKRKLKGKSKTLQ 879
ELFSEILDWFQQ F KHFEELWLQML EVL ETQ+ L +S K+K K KSK+ Q
Sbjct: 1278 ELFSEILDWFQQGFRKHFEELWLQMLGEVLQETQERPLHKSSKKKSKVKSKSRQ 1331
>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
vinifera]
Length = 1414
Score = 342 bits (876), Expect = 1e-91
Identities = 172/293 (58%), Positives = 217/293 (74%), Gaps = 3/293 (1%)
Frame = +1
Query: 1 ELSWQVSSAQYPLSLVKERLICQAICAGWADRVAKRITP-SRAADGEKSSRAIKYQSCTV 177
E +W+VSS ++PLSL +E L+ QAICAGWADRVAKR S +++G++ ++A +YQ+C V
Sbjct: 1137 EHAWRVSSDKHPLSLNEEELLGQAICAGWADRVAKRTRAISGSSEGDRKAKAARYQACMV 1196
Query: 178 EESILLHRWSSVSTVGPEFLVYNELLETKRPNKEGVTSAKRAYMHGVTSVEPAWLVEHAK 357
+E++ LHRWSS++ PEFLVY+ELL+TKRP YMHGVT+V+P WLV++A
Sbjct: 1197 KETVFLHRWSSLARSAPEFLVYSELLQTKRP-----------YMHGVTNVKPDWLVKYAA 1245
Query: 358 SSCIFSPPLTDPRPFYDAQTDQVKHWIVPTFGRFCWELPKHSLPISNDEHRVQVFAYALL 537
C FS PLTDP+P+Y+ DQV W++PTFG W LP H +PIS++ RV VFAYALL
Sbjct: 1246 PLCSFSAPLTDPKPYYEPLADQVFCWVIPTFGPHLWRLPLHGVPISDNAQRVSVFAYALL 1305
Query: 538 EGQVCPCLKSVRKYMSAPPESILKREAFGQKRVGNLLSKLKSR--LIDSSAMLRMVWKDN 711
EGQV PCL SVRKYM+APP SIL+ EA GQ+RVGNLLSKLKSR IDS MLR W++N
Sbjct: 1306 EGQVLPCLGSVRKYMAAPPASILRPEALGQRRVGNLLSKLKSRPKTIDSCLMLREAWREN 1365
Query: 712 PRELFSEILDWFQQSFHKHFEELWLQMLNEVLLETQDHRLCRSFKRKLKGKSK 870
PREL SEILDWFQ++FHK FE LW QM EVLL+ Q+ F +K +GK K
Sbjct: 1366 PRELHSEILDWFQETFHKQFEVLWSQMHLEVLLDPQER-----FPKKKRGKRK 1413