BLASTX nr result

ID: Glycyrrhiza24_contig00027817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027817
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554780.1| PREDICTED: rho GTPase-activating protein 32-...   147   2e-33
ref|XP_002320221.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29
ref|XP_003633913.1| PREDICTED: rho GTPase-activating protein 4-l...   127   2e-27
ref|XP_002529964.1| gtpase activating protein, putative [Ricinus...   126   2e-27
emb|CBI38689.3| unnamed protein product [Vitis vinifera]              125   6e-27

>ref|XP_003554780.1| PREDICTED: rho GTPase-activating protein 32-like [Glycine max]
          Length = 497

 Score =  147 bits (370), Expect = 2e-33
 Identities = 91/169 (53%), Positives = 103/169 (60%), Gaps = 12/169 (7%)
 Frame = -2

Query: 471 MTRLFRSKSCGLVELXXXXXXXXXXFHNAKGXXXXXXXXXXXXXXDW------------S 328
           MTRLFRSKSCGLVE            H+ K               +             S
Sbjct: 1   MTRLFRSKSCGLVEFNAAPPSPLF--HDVKSEDEDNEEDEDEDEEEEEEEELDSDDDVSS 58

Query: 327 NPASTPFINPGSKRGGGNSGMDNRGWRGXXXXXXXXXQFAILDILMAALKKSLVTCSVER 148
           NP ST  +NPGSK       ++N+GWRG          FA+LDIL+AALKKSLVTCSVER
Sbjct: 59  NPVSTALMNPGSK-------VENKGWRGGHGCQSNQ--FAMLDILLAALKKSLVTCSVER 109

Query: 147 DDVCSSSLDIGLPTEVRHVSHVTFDRFNGFLGLPSELQPEVPRRVPSAS 1
           +D+  SSLDI  PTEVRHVSHVTFDRFNGFLGLPSEL+ EVP+RVPSAS
Sbjct: 110 EDI--SSLDISWPTEVRHVSHVTFDRFNGFLGLPSELELEVPKRVPSAS 156


>ref|XP_002320221.1| predicted protein [Populus trichocarpa] gi|222860994|gb|EEE98536.1|
           predicted protein [Populus trichocarpa]
          Length = 490

 Score =  133 bits (334), Expect = 2e-29
 Identities = 88/163 (53%), Positives = 99/163 (60%), Gaps = 6/163 (3%)
 Frame = -2

Query: 471 MTRLFRSKSCGLVEL--XXXXXXXXXXFHNAKGXXXXXXXXXXXXXXDWS----NPASTP 310
           MTRLFRSKSCGLV L            FH                   +S    NP STP
Sbjct: 1   MTRLFRSKSCGLVGLTESNSAPPPSPFFHRNGTEDGEEDEDEDDEEELYSDASGNPISTP 60

Query: 309 FINPGSKRGGGNSGMDNRGWRGXXXXXXXXXQFAILDILMAALKKSLVTCSVERDDVCSS 130
           FI  GS+ G G S    RG  G         +FAILD+L+ AL+KSLVTCSVER+DV  S
Sbjct: 61  FI--GSREGTGGS---ERGRNG-----NSNKEFAILDVLVTALRKSLVTCSVEREDV--S 108

Query: 129 SLDIGLPTEVRHVSHVTFDRFNGFLGLPSELQPEVPRRVPSAS 1
           S+DI  PTEVRHVSHVTFDRFNGFLGLP+E +PEVP +VPSAS
Sbjct: 109 SMDISWPTEVRHVSHVTFDRFNGFLGLPTEFEPEVPCKVPSAS 151


>ref|XP_003633913.1| PREDICTED: rho GTPase-activating protein 4-like [Vitis vinifera]
          Length = 474

 Score =  127 bits (318), Expect = 2e-27
 Identities = 79/157 (50%), Positives = 89/157 (56%)
 Frame = -2

Query: 471 MTRLFRSKSCGLVELXXXXXXXXXXFHNAKGXXXXXXXXXXXXXXDWSNPASTPFINPGS 292
           M  LFRS+SCGL                  G                SNP STPFI  GS
Sbjct: 1   MAGLFRSRSCGLGRGGEFHTAPPSLGFYGSGEDEFDDDDDDFFA---SNPISTPFIGAGS 57

Query: 291 KRGGGNSGMDNRGWRGXXXXXXXXXQFAILDILMAALKKSLVTCSVERDDVCSSSLDIGL 112
           +  G  +G                 QF IL IL+AAL+KSLVTCSVER+DV  S++DI  
Sbjct: 58  RESGSANGQSQ------------GHQFPILPILLAALRKSLVTCSVEREDV--SAVDISW 103

Query: 111 PTEVRHVSHVTFDRFNGFLGLPSELQPEVPRRVPSAS 1
           PT V+HVSHVTFDRFNGFLGLP EL+PEVPRRVPSAS
Sbjct: 104 PTNVQHVSHVTFDRFNGFLGLPVELEPEVPRRVPSAS 140


>ref|XP_002529964.1| gtpase activating protein, putative [Ricinus communis]
           gi|223530526|gb|EEF32407.1| gtpase activating protein,
           putative [Ricinus communis]
          Length = 511

 Score =  126 bits (317), Expect = 2e-27
 Identities = 77/168 (45%), Positives = 92/168 (54%), Gaps = 16/168 (9%)
 Frame = -2

Query: 471 MTRLFRSKSCGLVELXXXXXXXXXXF----------------HNAKGXXXXXXXXXXXXX 340
           MTRLFRSKSCGLV L                                             
Sbjct: 1   MTRLFRSKSCGLVGLGFSDFNPVPPPAPFSCQNDSVQENSDEEEEDEEEYDEEDEYNDDT 60

Query: 339 XDWSNPASTPFINPGSKRGGGNSGMDNRGWRGXXXXXXXXXQFAILDILMAALKKSLVTC 160
               NP STPFI+PGS+ GG       RG R          QFAI+DIL+ AL+KS+VTC
Sbjct: 61  GALRNPISTPFISPGSRFGG-------RGGRNGNNNSNNSNQFAIVDILVTALRKSIVTC 113

Query: 159 SVERDDVCSSSLDIGLPTEVRHVSHVTFDRFNGFLGLPSELQPEVPRR 16
           SVER+DVCS  +DI  PT+V+HVSHVTFDRFNGFLGLP+E +P++PR+
Sbjct: 114 SVEREDVCS--MDISWPTDVKHVSHVTFDRFNGFLGLPTEFEPDLPRK 159


>emb|CBI38689.3| unnamed protein product [Vitis vinifera]
          Length = 345

 Score =  125 bits (313), Expect = 6e-27
 Identities = 69/110 (62%), Positives = 78/110 (70%)
 Frame = -2

Query: 330 SNPASTPFINPGSKRGGGNSGMDNRGWRGXXXXXXXXXQFAILDILMAALKKSLVTCSVE 151
           SNP STPFI  GS+  G  +G                 QF IL IL+AAL+KSLVTCSVE
Sbjct: 45  SNPISTPFIGAGSRESGSANGQSQ------------GHQFPILPILLAALRKSLVTCSVE 92

Query: 150 RDDVCSSSLDIGLPTEVRHVSHVTFDRFNGFLGLPSELQPEVPRRVPSAS 1
           R+DV  S++DI  PT V+HVSHVTFDRFNGFLGLP EL+PEVPRRVPSAS
Sbjct: 93  REDV--SAVDISWPTNVQHVSHVTFDRFNGFLGLPVELEPEVPRRVPSAS 140


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