BLASTX nr result

ID: Glycyrrhiza24_contig00027813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027813
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFO11041.1| HD-1A [Gossypium hirsutum]                             213   1e-53
gb|AAD17342.1| contains similarity to homeobox domains (Pfam: PF...   213   2e-53
emb|CAB81031.1| putative homeotic protein [Arabidopsis thaliana]      213   2e-53
ref|NP_567274.1| homeobox-leucine zipper protein PROTODERMAL FAC...   213   2e-53
ref|NP_193906.2| homeobox-leucine zipper protein MERISTEM L1 [Ar...   211   4e-53

>gb|AFO11041.1| HD-1A [Gossypium hirsutum]
          Length = 725

 Score =  213 bits (542), Expect = 1e-53
 Identities = 102/134 (76%), Positives = 118/134 (88%), Gaps = 7/134 (5%)
 Frame = -3

Query: 383 GDPLWVPAGNSCEILNEDEYVRVFPRGF-------RTEASRESVVVIMNHINLVEILMDV 225
           G+PLWVP  NS ++L+EDEY+R FPRG        R+EASRES VVIMNH+NLVEILMDV
Sbjct: 263 GEPLWVPGDNSIDVLSEDEYLRTFPRGIGPKPLGLRSEASRESAVVIMNHVNLVEILMDV 322

Query: 224 NQWATMFSGIVSRAMTLEILSTGVAGNYNGALQVMSAEFQVPSPLVPIRDNYFVRYCKQH 45
           NQW+++F GIVSRAMTLE+LSTGVAGNYNGALQVM+AEFQVPSPLVP R+NYFVRYCKQH
Sbjct: 323 NQWSSVFCGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQH 382

Query: 44  QEGSWAVVDVSLDH 3
            +G+WAVVDVSLD+
Sbjct: 383 IDGTWAVVDVSLDN 396


>gb|AAD17342.1| contains similarity to homeobox domains (Pfam: PF00046, Score,36.5,
           E=6.9e-08, N=1) [Arabidopsis thaliana]
          Length = 772

 Score =  213 bits (541), Expect = 2e-53
 Identities = 104/133 (78%), Positives = 115/133 (86%), Gaps = 7/133 (5%)
 Frame = -3

Query: 383 GDPLWVPAGNSCEILNEDEYVRVFPRGF-------RTEASRESVVVIMNHINLVEILMDV 225
           GDPLW+   NS EILNE+EY R FPRG        R+EASR+S VVIMNHINLVEILMDV
Sbjct: 279 GDPLWLSTDNSVEILNEEEYFRTFPRGIGPKPLGLRSEASRQSAVVIMNHINLVEILMDV 338

Query: 224 NQWATMFSGIVSRAMTLEILSTGVAGNYNGALQVMSAEFQVPSPLVPIRDNYFVRYCKQH 45
           NQW+ +FSGIVSRA+TLE+LSTGVAGNYNGALQVM+AEFQVPSPLVP R+NYFVRYCKQH
Sbjct: 339 NQWSCVFSGIVSRALTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQH 398

Query: 44  QEGSWAVVDVSLD 6
            +GSWAVVDVSLD
Sbjct: 399 SDGSWAVVDVSLD 411


>emb|CAB81031.1| putative homeotic protein [Arabidopsis thaliana]
          Length = 738

 Score =  213 bits (541), Expect = 2e-53
 Identities = 104/133 (78%), Positives = 115/133 (86%), Gaps = 7/133 (5%)
 Frame = -3

Query: 383 GDPLWVPAGNSCEILNEDEYVRVFPRGF-------RTEASRESVVVIMNHINLVEILMDV 225
           GDPLW+   NS EILNE+EY R FPRG        R+EASR+S VVIMNHINLVEILMDV
Sbjct: 264 GDPLWLSTDNSVEILNEEEYFRTFPRGIGPKPLGLRSEASRQSAVVIMNHINLVEILMDV 323

Query: 224 NQWATMFSGIVSRAMTLEILSTGVAGNYNGALQVMSAEFQVPSPLVPIRDNYFVRYCKQH 45
           NQW+ +FSGIVSRA+TLE+LSTGVAGNYNGALQVM+AEFQVPSPLVP R+NYFVRYCKQH
Sbjct: 324 NQWSCVFSGIVSRALTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQH 383

Query: 44  QEGSWAVVDVSLD 6
            +GSWAVVDVSLD
Sbjct: 384 SDGSWAVVDVSLD 396


>ref|NP_567274.1| homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Arabidopsis
           thaliana] gi|75331628|sp|Q93V99.1|PDF2_ARATH RecName:
           Full=Homeobox-leucine zipper protein PROTODERMAL FACTOR
           2; AltName: Full=HD-ZIP protein PDF2; AltName:
           Full=Homeodomain transcription factor PDF2
           gi|15983372|gb|AAL11554.1|AF424560_1 AT4g04890/T1J1_3
           [Arabidopsis thaliana] gi|14276060|dbj|BAB58961.1|
           protodermal factor2 [Arabidopsis thaliana]
           gi|17064998|gb|AAL32653.1| Unknown protein [Arabidopsis
           thaliana] gi|23197872|gb|AAN15463.1| Unknown protein
           [Arabidopsis thaliana] gi|332657038|gb|AEE82438.1|
           homeobox-leucine zipper protein PROTODERMAL FACTOR 2
           [Arabidopsis thaliana]
          Length = 743

 Score =  213 bits (541), Expect = 2e-53
 Identities = 104/133 (78%), Positives = 115/133 (86%), Gaps = 7/133 (5%)
 Frame = -3

Query: 383 GDPLWVPAGNSCEILNEDEYVRVFPRGF-------RTEASRESVVVIMNHINLVEILMDV 225
           GDPLW+   NS EILNE+EY R FPRG        R+EASR+S VVIMNHINLVEILMDV
Sbjct: 269 GDPLWLSTDNSVEILNEEEYFRTFPRGIGPKPLGLRSEASRQSAVVIMNHINLVEILMDV 328

Query: 224 NQWATMFSGIVSRAMTLEILSTGVAGNYNGALQVMSAEFQVPSPLVPIRDNYFVRYCKQH 45
           NQW+ +FSGIVSRA+TLE+LSTGVAGNYNGALQVM+AEFQVPSPLVP R+NYFVRYCKQH
Sbjct: 329 NQWSCVFSGIVSRALTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQH 388

Query: 44  QEGSWAVVDVSLD 6
            +GSWAVVDVSLD
Sbjct: 389 SDGSWAVVDVSLD 401


>ref|NP_193906.2| homeobox-leucine zipper protein MERISTEM L1 [Arabidopsis thaliana]
           gi|79325215|ref|NP_001031692.1| homeobox-leucine zipper
           protein MERISTEM L1 [Arabidopsis thaliana]
           gi|75330714|sp|Q8RWU4.1|ATML1_ARATH RecName:
           Full=Homeobox-leucine zipper protein MERISTEM L1;
           AltName: Full=HD-ZIP protein ATML1; AltName:
           Full=Homeodomain transcription factor ATML1
           gi|20268701|gb|AAM14054.1| putative L1-specific homeobox
           gene ATML1/ovule-specific homeobox protein A20
           [Arabidopsis thaliana] gi|23297714|gb|AAN12908.1|
           putative L1-specific homeobox gene ATML1/ovule-specific
           homeobox protein A20 [Arabidopsis thaliana]
           gi|110739777|dbj|BAF01795.1| L1 specific homeobox gene
           ATML1/ovule-specific homeobox protein A20 [Arabidopsis
           thaliana] gi|332659098|gb|AEE84498.1| homeobox-leucine
           zipper protein MERISTEM L1 [Arabidopsis thaliana]
           gi|332659099|gb|AEE84499.1| homeobox-leucine zipper
           protein MERISTEM L1 [Arabidopsis thaliana]
          Length = 762

 Score =  211 bits (538), Expect = 4e-53
 Identities = 103/133 (77%), Positives = 115/133 (86%), Gaps = 7/133 (5%)
 Frame = -3

Query: 383 GDPLWVPAGNSCEILNEDEYVRVFPRGF-------RTEASRESVVVIMNHINLVEILMDV 225
           GDPLWV + NS EILNE+EY R FPRG        R+EASRES VVIMNHINL+EILMDV
Sbjct: 278 GDPLWVSSDNSVEILNEEEYFRTFPRGIGPKPIGLRSEASRESTVVIMNHINLIEILMDV 337

Query: 224 NQWATMFSGIVSRAMTLEILSTGVAGNYNGALQVMSAEFQVPSPLVPIRDNYFVRYCKQH 45
           NQW+++F GIVSRA+TLE+LSTGVAGNYNGALQVM+AEFQVPSPLVP R+NYFVRYCKQH
Sbjct: 338 NQWSSVFCGIVSRALTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQH 397

Query: 44  QEGSWAVVDVSLD 6
            +G WAVVDVSLD
Sbjct: 398 SDGIWAVVDVSLD 410


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