BLASTX nr result

ID: Glycyrrhiza24_contig00027800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027800
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530447.1| PREDICTED: uncharacterized protein LOC100808...   142   2e-32
ref|XP_003543871.1| PREDICTED: uncharacterized protein LOC100793...   110   1e-22
emb|CBI21215.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002276947.1| PREDICTED: uncharacterized protein LOC100266...    57   2e-06
emb|CAN79807.1| hypothetical protein VITISV_014910 [Vitis vinifera]    57   2e-06

>ref|XP_003530447.1| PREDICTED: uncharacterized protein LOC100808151 [Glycine max]
          Length = 973

 Score =  142 bits (359), Expect = 2e-32
 Identities = 79/127 (62%), Positives = 87/127 (68%)
 Frame = +2

Query: 5   NPTNGRLVDXXXXXXXXXXXXNIKDTFGQPVPSADKNSNLRTSKLMQSSKVPQDNNGKNT 184
           NPTNGRLVD            NIKD FGQ V S+DKN N+RTSKLMQS KV QDN G+ T
Sbjct: 519 NPTNGRLVDRQTTIGISSTTKNIKDPFGQQVLSSDKN-NMRTSKLMQSLKVSQDNTGECT 577

Query: 185 TNSGNITVTRSPRLQKKFGLERRXXXXXXXXXXGCNRRQHNRQSMELSSPSTTPRQRFST 364
           TNSG  TVT SPRLQKKFGLER             NRR H+RQ +ELSSPSTTPR +FST
Sbjct: 578 TNSGYTTVTGSPRLQKKFGLERCSQPTSPSSDSRINRRGHDRQPVELSSPSTTPRHKFST 637

Query: 365 SEERNER 385
            ++RNER
Sbjct: 638 LQQRNER 644


>ref|XP_003543871.1| PREDICTED: uncharacterized protein LOC100793602 [Glycine max]
          Length = 464

 Score =  110 bits (275), Expect = 1e-22
 Identities = 61/103 (59%), Positives = 69/103 (66%)
 Frame = +2

Query: 77  DTFGQPVPSADKNSNLRTSKLMQSSKVPQDNNGKNTTNSGNITVTRSPRLQKKFGLERRX 256
           D   QP  S +K++  RTSKLMQSSKV Q  NG+N TNS N    +SPRLQKKFGLERR 
Sbjct: 22  DPISQPFHSVNKSNKKRTSKLMQSSKVRQVINGENATNSSNTAEAKSPRLQKKFGLERRS 81

Query: 257 XXXXXXXXXGCNRRQHNRQSMELSSPSTTPRQRFSTSEERNER 385
                      NRRQ NRQS+ELSSPSTTPRQ+F  SE  N+R
Sbjct: 82  PPTSPSSDLSSNRRQQNRQSVELSSPSTTPRQKF--SEISNQR 122


>emb|CBI21215.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
 Frame = +2

Query: 68  NIKDTFGQPVPSADKNSNLRTSKLMQSSKVPQDNNGKNTTNSGNITVTRSPRL-QKKFGL 244
           ++K+   QP    DK+S  R+S+L ++SKV Q  N +NT++SG  +   SPRL QKK  L
Sbjct: 484 HLKEPSSQPSRLLDKSSADRSSRLTKTSKVHQKINEENTSSSGRNSGAVSPRLQQKKLEL 543

Query: 245 ERRXXXXXXXXXXGCNRRQHNRQSMELSSPSTTPRQRFSTSEERNERL 388
           +++             RRQ +RQ  E SSP+   RQR     + +++L
Sbjct: 544 DKQSRSTTPSPESSRVRRQSSRQLTEPSSPARKLRQRAPNLLQSDDQL 591


>ref|XP_002276947.1| PREDICTED: uncharacterized protein LOC100266999 [Vitis vinifera]
          Length = 1054

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
 Frame = +2

Query: 68  NIKDTFGQPVPSADKNSNLRTSKLMQSSKVPQDNNGKNTTNSGNITVTRSPRL-QKKFGL 244
           ++K+   QP    DK+S  R+S+L ++SKV Q  N +NT++SG  +   SPRL QKK  L
Sbjct: 583 HLKEPSSQPSRLLDKSSADRSSRLTKTSKVHQKINEENTSSSGRNSGAVSPRLQQKKLEL 642

Query: 245 ERRXXXXXXXXXXGCNRRQHNRQSMELSSPSTTPRQRFSTSEERNERL 388
           +++             RRQ +RQ  E SSP+   RQR     + +++L
Sbjct: 643 DKQSRSTTPSPESSRVRRQSSRQLTEPSSPARKLRQRAPNLLQSDDQL 690


>emb|CAN79807.1| hypothetical protein VITISV_014910 [Vitis vinifera]
          Length = 811

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
 Frame = +2

Query: 68  NIKDTFGQPVPSADKNSNLRTSKLMQSSKVPQDNNGKNTTNSGNITVTRSPRL-QKKFGL 244
           ++K+   QP    DK+S  R+S+L ++SKV Q  N +NT++SG  +   SPRL QKK  L
Sbjct: 524 HLKEPSSQPSRLLDKSSADRSSRLTKTSKVHQKINEENTSSSGRNSGAVSPRLQQKKLEL 583

Query: 245 ERRXXXXXXXXXXGCNRRQHNRQSMELSSPSTTPRQRFSTSEERNERL 388
           +++             RRQ +RQ  E SSP+   RQR     + +++L
Sbjct: 584 DKQSRSTTPSPESSRVRRQSSRQLTEPSSPARKLRQRAPNLLQSDDQL 631


Top