BLASTX nr result

ID: Glycyrrhiza24_contig00027796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027796
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329012.1| predicted protein [Populus trichocarpa] gi|2...   182   2e-44
emb|CAN81954.1| hypothetical protein VITISV_014020 [Vitis vinifera]   180   9e-44
ref|XP_002327524.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43
ref|XP_003549145.1| PREDICTED: zinc finger BED domain-containing...   152   3e-35
gb|ABA18106.1| hAT-like transposase [Capsella rubella]                151   5e-35

>ref|XP_002329012.1| predicted protein [Populus trichocarpa] gi|222839683|gb|EEE78006.1|
           predicted protein [Populus trichocarpa]
          Length = 1099

 Score =  182 bits (462), Expect = 2e-44
 Identities = 93/145 (64%), Positives = 107/145 (73%), Gaps = 6/145 (4%)
 Frame = -1

Query: 418 GCARAYCKRCKKSFAYMKDSKQSGTSHLKRHISLGIC----QKNQQTP--PCSKTDADLP 257
           GC RA CK+CKKSFAY+  SK +GTSHLKRHI+LGIC    QKN+ +P  P SKTD   P
Sbjct: 53  GCMRACCKQCKKSFAYITGSKLAGTSHLKRHIALGICPVSRQKNESSPYTPGSKTDP--P 110

Query: 256 KKRGRTKPCFAAISFDQEHCNDKIAKMIILHDYPLHIVEHQGFINFARALQPQFNPLSLN 77
           KKR R  P F+ I  DQ+ CN +IAKMII HDYPLHIVEH GFI+F R LQP +N +S N
Sbjct: 111 KKRFRASPGFSGIPLDQDRCNHEIAKMIIQHDYPLHIVEHPGFIDFVRTLQPHYNMVSFN 170

Query: 76  AVQGGCVAMYLIEKQNLLNLIDGIP 2
            +QG CV +YL EKQ LLNLI GIP
Sbjct: 171 TIQGECVDVYLREKQRLLNLISGIP 195


>emb|CAN81954.1| hypothetical protein VITISV_014020 [Vitis vinifera]
          Length = 1045

 Score =  180 bits (457), Expect = 9e-44
 Identities = 91/153 (59%), Positives = 109/153 (71%), Gaps = 14/153 (9%)
 Frame = -1

Query: 418 GCARAYCKRCKKSFAYMKDSKQSGTSHLKRHISLGIC-------QKNQQTP--PCSKT-- 272
           GC RA CK+CKKSFAY+  SK +GTSHLKRHI+LGIC       +KNQ TP  P S+   
Sbjct: 396 GCTRACCKQCKKSFAYITGSKLAGTSHLKRHIALGICPVSRRNQEKNQLTPYTPASQAGF 455

Query: 271 ---DADLPKKRGRTKPCFAAISFDQEHCNDKIAKMIILHDYPLHIVEHQGFINFARALQP 101
                D PK+R R  P  A I FDQ+ CN +IAKMII+H+YPLHIVEH GFINF   LQP
Sbjct: 456 TGNSTDAPKRRYRGTPVSANIPFDQDRCNQEIAKMIIMHEYPLHIVEHSGFINFVHTLQP 515

Query: 100 QFNPLSLNAVQGGCVAMYLIEKQNLLNLIDGIP 2
           QFN +S N++QG CVA++L EKQNL N ++GIP
Sbjct: 516 QFNMVSFNSIQGDCVALFLREKQNLSNTLNGIP 548


>ref|XP_002327524.1| predicted protein [Populus trichocarpa] gi|222836078|gb|EEE74499.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score =  179 bits (455), Expect = 2e-43
 Identities = 88/143 (61%), Positives = 105/143 (73%), Gaps = 4/143 (2%)
 Frame = -1

Query: 418 GCARAYCKRCKKSFAYMKDSKQSGTSHLKRHISLGIC----QKNQQTPPCSKTDADLPKK 251
           GC RA CK+CKKSFAY+  +K +GTSHLKRHI+LGIC    QKN+ +P         PKK
Sbjct: 21  GCMRACCKQCKKSFAYITGTKLAGTSHLKRHIALGICPVSRQKNESSPYTPGLKTGPPKK 80

Query: 250 RGRTKPCFAAISFDQEHCNDKIAKMIILHDYPLHIVEHQGFINFARALQPQFNPLSLNAV 71
           R R  P F+AI  DQ+ CN +IAKMII HDYPLHIVEH  FI+F R LQP +N ++LN +
Sbjct: 81  RFRASPGFSAIPLDQDRCNHEIAKMIIQHDYPLHIVEHPAFIDFVRTLQPHYNMMNLNTI 140

Query: 70  QGGCVAMYLIEKQNLLNLIDGIP 2
           QG CVA+YL EKQ+LLNLI GIP
Sbjct: 141 QGECVAVYLREKQSLLNLIGGIP 163


>ref|XP_003549145.1| PREDICTED: zinc finger BED domain-containing protein 1-like
           [Glycine max]
          Length = 1038

 Score =  152 bits (384), Expect = 3e-35
 Identities = 74/151 (49%), Positives = 99/151 (65%), Gaps = 13/151 (8%)
 Frame = -1

Query: 415 CARAYCKRCKKSFAYMKDSKQSGTSHLKRHISLGICQ-------KNQQTPPCSKT----- 272
           C RA CK+C ++FAY   SK +GTSHLKRH++ G C        +NQ TP  ++T     
Sbjct: 425 CRRARCKQCAQTFAYSTGSKVAGTSHLKRHVAKGTCSALLRNHNRNQLTPYAARTRRSGT 484

Query: 271 -DADLPKKRGRTKPCFAAISFDQEHCNDKIAKMIILHDYPLHIVEHQGFINFARALQPQF 95
            DA   +KR    P    + FDQ+ C ++IA+MII+HDYPLH+VEH GF+ F + LQPQF
Sbjct: 485 GDASSTRKRQYRSPSMPYVIFDQDQCRNEIARMIIMHDYPLHMVEHSGFVAFVQNLQPQF 544

Query: 94  NPLSLNAVQGGCVAMYLIEKQNLLNLIDGIP 2
              + N++QG CVA YL+EKQ+LL  IDG+P
Sbjct: 545 KMETFNSIQGDCVATYLMEKQHLLKCIDGLP 575


>gb|ABA18106.1| hAT-like transposase [Capsella rubella]
          Length = 665

 Score =  151 bits (382), Expect = 5e-35
 Identities = 74/149 (49%), Positives = 101/149 (67%), Gaps = 11/149 (7%)
 Frame = -1

Query: 415 CARAYCKRCKKSFAYMKDSKQSGTSHLKRHISLGIC------QKNQQ-----TPPCSKTD 269
           C RA+CK C +SFAY   +K +GTSHLKRHI+ G C      Q N       TP   KTD
Sbjct: 58  CRRAFCKGCNQSFAYSNGNKVAGTSHLKRHIAKGTCPALAHTQNNDNNQLMGTPYTPKTD 117

Query: 268 ADLPKKRGRTKPCFAAISFDQEHCNDKIAKMIILHDYPLHIVEHQGFINFARALQPQFNP 89
              P++R R++     ++F+Q+ C+ +IAKMIILHDYPLH+VEH GF++F +++QP F+ 
Sbjct: 118 T--PRRRYRSQNASPYVAFNQDKCHQEIAKMIILHDYPLHMVEHPGFVSFVKSIQPHFDA 175

Query: 88  LSLNAVQGGCVAMYLIEKQNLLNLIDGIP 2
           +S N VQG CVA YL EKQN++  ++GIP
Sbjct: 176 MSFNNVQGDCVATYLAEKQNVMKSLEGIP 204


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