BLASTX nr result

ID: Glycyrrhiza24_contig00027794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027794
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525930.1| PREDICTED: nuclear pore complex protein Nup2...   192   2e-47
ref|XP_003633105.1| PREDICTED: nuclear pore complex protein Nup2...   190   9e-47
emb|CBI28192.3| unnamed protein product [Vitis vinifera]              190   9e-47
gb|AFJ66182.1| hypothetical protein 11M19.28 [Arabidopsis halleri]    169   2e-40
ref|XP_002864101.1| hypothetical protein ARALYDRAFT_495190 [Arab...   169   2e-40

>ref|XP_003525930.1| PREDICTED: nuclear pore complex protein Nup205-like [Glycine max]
          Length = 1931

 Score =  192 bits (488), Expect = 2e-47
 Identities = 101/128 (78%), Positives = 104/128 (81%)
 Frame = -2

Query: 385 MVSPKQXXXXXXXXXXXXXXXXXAQRVELLHAVRTSIHSFHSLLSCPPPKPSDRSQVQSK 206
           MVSPKQ                 A RVELLHA+RTS  S  SLLS PPPKPSDRSQVQSK
Sbjct: 1   MVSPKQLLGTIESALLGTSPPMAAHRVELLHALRTSRTSLQSLLSYPPPKPSDRSQVQSK 60

Query: 205 SVRLPDSPPISLDDQDVQIALKLSDDLHLNEVDCVRLLVAANQEWGLMGREPLEILRLAA 26
           SVRLPDSPPISLDDQDV IALKLSDDLHLNEVDCVRLLV+AN+EWGLMGREPLEILRLAA
Sbjct: 61  SVRLPDSPPISLDDQDVHIALKLSDDLHLNEVDCVRLLVSANKEWGLMGREPLEILRLAA 120

Query: 25  GLWYTERR 2
           GLWYTERR
Sbjct: 121 GLWYTERR 128


>ref|XP_003633105.1| PREDICTED: nuclear pore complex protein Nup205-like [Vitis
           vinifera]
          Length = 1934

 Score =  190 bits (483), Expect = 9e-47
 Identities = 97/128 (75%), Positives = 104/128 (81%)
 Frame = -2

Query: 385 MVSPKQXXXXXXXXXXXXXXXXXAQRVELLHAVRTSIHSFHSLLSCPPPKPSDRSQVQSK 206
           MVSPKQ                 AQ VEL+HA+R+S+ S  SLLS PPPKPSDR+QVQSK
Sbjct: 1   MVSPKQLLSIIESSLLGPSPPTPAQWVELIHAIRSSLSSLQSLLSFPPPKPSDRAQVQSK 60

Query: 205 SVRLPDSPPISLDDQDVQIALKLSDDLHLNEVDCVRLLVAANQEWGLMGREPLEILRLAA 26
            VRLPDSPPISLDDQDVQIALKLSDDLHLNE+DCVRLLV+ANQEWGLMGREPLEILRLA 
Sbjct: 61  EVRLPDSPPISLDDQDVQIALKLSDDLHLNEIDCVRLLVSANQEWGLMGREPLEILRLAE 120

Query: 25  GLWYTERR 2
           GLWYTERR
Sbjct: 121 GLWYTERR 128


>emb|CBI28192.3| unnamed protein product [Vitis vinifera]
          Length = 1889

 Score =  190 bits (483), Expect = 9e-47
 Identities = 97/128 (75%), Positives = 104/128 (81%)
 Frame = -2

Query: 385 MVSPKQXXXXXXXXXXXXXXXXXAQRVELLHAVRTSIHSFHSLLSCPPPKPSDRSQVQSK 206
           MVSPKQ                 AQ VEL+HA+R+S+ S  SLLS PPPKPSDR+QVQSK
Sbjct: 1   MVSPKQLLSIIESSLLGPSPPTPAQWVELIHAIRSSLSSLQSLLSFPPPKPSDRAQVQSK 60

Query: 205 SVRLPDSPPISLDDQDVQIALKLSDDLHLNEVDCVRLLVAANQEWGLMGREPLEILRLAA 26
            VRLPDSPPISLDDQDVQIALKLSDDLHLNE+DCVRLLV+ANQEWGLMGREPLEILRLA 
Sbjct: 61  EVRLPDSPPISLDDQDVQIALKLSDDLHLNEIDCVRLLVSANQEWGLMGREPLEILRLAE 120

Query: 25  GLWYTERR 2
           GLWYTERR
Sbjct: 121 GLWYTERR 128


>gb|AFJ66182.1| hypothetical protein 11M19.28 [Arabidopsis halleri]
          Length = 1729

 Score =  169 bits (429), Expect = 2e-40
 Identities = 85/128 (66%), Positives = 96/128 (75%)
 Frame = -2

Query: 385 MVSPKQXXXXXXXXXXXXXXXXXAQRVELLHAVRTSIHSFHSLLSCPPPKPSDRSQVQSK 206
           MVSPK+                  QR+EL HA+R S  S  +LLS PPPKPSDR+QVQSK
Sbjct: 1   MVSPKELVAIVHSSLLGTSRPTPTQRIELTHAIRNSFSSIQNLLSFPPPKPSDRAQVQSK 60

Query: 205 SVRLPDSPPISLDDQDVQIALKLSDDLHLNEVDCVRLLVAANQEWGLMGREPLEILRLAA 26
            +RLPDS PISLDDQDV I+LKLSD+LHLNE+D VRLLV+ANQEWGLMGR+PLEI RLA 
Sbjct: 61  EIRLPDSLPISLDDQDVAISLKLSDELHLNEIDSVRLLVSANQEWGLMGRDPLEIQRLAT 120

Query: 25  GLWYTERR 2
           GLWYT RR
Sbjct: 121 GLWYTGRR 128


>ref|XP_002864101.1| hypothetical protein ARALYDRAFT_495190 [Arabidopsis lyrata subsp.
           lyrata] gi|297309936|gb|EFH40360.1| hypothetical protein
           ARALYDRAFT_495190 [Arabidopsis lyrata subsp. lyrata]
          Length = 1808

 Score =  169 bits (429), Expect = 2e-40
 Identities = 85/128 (66%), Positives = 96/128 (75%)
 Frame = -2

Query: 385 MVSPKQXXXXXXXXXXXXXXXXXAQRVELLHAVRTSIHSFHSLLSCPPPKPSDRSQVQSK 206
           MVSPK+                  QR+EL HA+R S  S  +LLS PPPKPSDR+QVQSK
Sbjct: 1   MVSPKELVAIVHSSLLGTSLPTPTQRIELTHAIRNSFSSIQNLLSFPPPKPSDRAQVQSK 60

Query: 205 SVRLPDSPPISLDDQDVQIALKLSDDLHLNEVDCVRLLVAANQEWGLMGREPLEILRLAA 26
            +RLPDS PISLDDQDV I+LKLSD+LHLNE+D VRLLV+ANQEWGLMGR+PLEI RLA 
Sbjct: 61  EIRLPDSLPISLDDQDVAISLKLSDELHLNEIDSVRLLVSANQEWGLMGRDPLEIQRLAT 120

Query: 25  GLWYTERR 2
           GLWYT RR
Sbjct: 121 GLWYTGRR 128


Top