BLASTX nr result
ID: Glycyrrhiza24_contig00027794
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00027794 (515 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003525930.1| PREDICTED: nuclear pore complex protein Nup2... 192 2e-47 ref|XP_003633105.1| PREDICTED: nuclear pore complex protein Nup2... 190 9e-47 emb|CBI28192.3| unnamed protein product [Vitis vinifera] 190 9e-47 gb|AFJ66182.1| hypothetical protein 11M19.28 [Arabidopsis halleri] 169 2e-40 ref|XP_002864101.1| hypothetical protein ARALYDRAFT_495190 [Arab... 169 2e-40 >ref|XP_003525930.1| PREDICTED: nuclear pore complex protein Nup205-like [Glycine max] Length = 1931 Score = 192 bits (488), Expect = 2e-47 Identities = 101/128 (78%), Positives = 104/128 (81%) Frame = -2 Query: 385 MVSPKQXXXXXXXXXXXXXXXXXAQRVELLHAVRTSIHSFHSLLSCPPPKPSDRSQVQSK 206 MVSPKQ A RVELLHA+RTS S SLLS PPPKPSDRSQVQSK Sbjct: 1 MVSPKQLLGTIESALLGTSPPMAAHRVELLHALRTSRTSLQSLLSYPPPKPSDRSQVQSK 60 Query: 205 SVRLPDSPPISLDDQDVQIALKLSDDLHLNEVDCVRLLVAANQEWGLMGREPLEILRLAA 26 SVRLPDSPPISLDDQDV IALKLSDDLHLNEVDCVRLLV+AN+EWGLMGREPLEILRLAA Sbjct: 61 SVRLPDSPPISLDDQDVHIALKLSDDLHLNEVDCVRLLVSANKEWGLMGREPLEILRLAA 120 Query: 25 GLWYTERR 2 GLWYTERR Sbjct: 121 GLWYTERR 128 >ref|XP_003633105.1| PREDICTED: nuclear pore complex protein Nup205-like [Vitis vinifera] Length = 1934 Score = 190 bits (483), Expect = 9e-47 Identities = 97/128 (75%), Positives = 104/128 (81%) Frame = -2 Query: 385 MVSPKQXXXXXXXXXXXXXXXXXAQRVELLHAVRTSIHSFHSLLSCPPPKPSDRSQVQSK 206 MVSPKQ AQ VEL+HA+R+S+ S SLLS PPPKPSDR+QVQSK Sbjct: 1 MVSPKQLLSIIESSLLGPSPPTPAQWVELIHAIRSSLSSLQSLLSFPPPKPSDRAQVQSK 60 Query: 205 SVRLPDSPPISLDDQDVQIALKLSDDLHLNEVDCVRLLVAANQEWGLMGREPLEILRLAA 26 VRLPDSPPISLDDQDVQIALKLSDDLHLNE+DCVRLLV+ANQEWGLMGREPLEILRLA Sbjct: 61 EVRLPDSPPISLDDQDVQIALKLSDDLHLNEIDCVRLLVSANQEWGLMGREPLEILRLAE 120 Query: 25 GLWYTERR 2 GLWYTERR Sbjct: 121 GLWYTERR 128 >emb|CBI28192.3| unnamed protein product [Vitis vinifera] Length = 1889 Score = 190 bits (483), Expect = 9e-47 Identities = 97/128 (75%), Positives = 104/128 (81%) Frame = -2 Query: 385 MVSPKQXXXXXXXXXXXXXXXXXAQRVELLHAVRTSIHSFHSLLSCPPPKPSDRSQVQSK 206 MVSPKQ AQ VEL+HA+R+S+ S SLLS PPPKPSDR+QVQSK Sbjct: 1 MVSPKQLLSIIESSLLGPSPPTPAQWVELIHAIRSSLSSLQSLLSFPPPKPSDRAQVQSK 60 Query: 205 SVRLPDSPPISLDDQDVQIALKLSDDLHLNEVDCVRLLVAANQEWGLMGREPLEILRLAA 26 VRLPDSPPISLDDQDVQIALKLSDDLHLNE+DCVRLLV+ANQEWGLMGREPLEILRLA Sbjct: 61 EVRLPDSPPISLDDQDVQIALKLSDDLHLNEIDCVRLLVSANQEWGLMGREPLEILRLAE 120 Query: 25 GLWYTERR 2 GLWYTERR Sbjct: 121 GLWYTERR 128 >gb|AFJ66182.1| hypothetical protein 11M19.28 [Arabidopsis halleri] Length = 1729 Score = 169 bits (429), Expect = 2e-40 Identities = 85/128 (66%), Positives = 96/128 (75%) Frame = -2 Query: 385 MVSPKQXXXXXXXXXXXXXXXXXAQRVELLHAVRTSIHSFHSLLSCPPPKPSDRSQVQSK 206 MVSPK+ QR+EL HA+R S S +LLS PPPKPSDR+QVQSK Sbjct: 1 MVSPKELVAIVHSSLLGTSRPTPTQRIELTHAIRNSFSSIQNLLSFPPPKPSDRAQVQSK 60 Query: 205 SVRLPDSPPISLDDQDVQIALKLSDDLHLNEVDCVRLLVAANQEWGLMGREPLEILRLAA 26 +RLPDS PISLDDQDV I+LKLSD+LHLNE+D VRLLV+ANQEWGLMGR+PLEI RLA Sbjct: 61 EIRLPDSLPISLDDQDVAISLKLSDELHLNEIDSVRLLVSANQEWGLMGRDPLEIQRLAT 120 Query: 25 GLWYTERR 2 GLWYT RR Sbjct: 121 GLWYTGRR 128 >ref|XP_002864101.1| hypothetical protein ARALYDRAFT_495190 [Arabidopsis lyrata subsp. lyrata] gi|297309936|gb|EFH40360.1| hypothetical protein ARALYDRAFT_495190 [Arabidopsis lyrata subsp. lyrata] Length = 1808 Score = 169 bits (429), Expect = 2e-40 Identities = 85/128 (66%), Positives = 96/128 (75%) Frame = -2 Query: 385 MVSPKQXXXXXXXXXXXXXXXXXAQRVELLHAVRTSIHSFHSLLSCPPPKPSDRSQVQSK 206 MVSPK+ QR+EL HA+R S S +LLS PPPKPSDR+QVQSK Sbjct: 1 MVSPKELVAIVHSSLLGTSLPTPTQRIELTHAIRNSFSSIQNLLSFPPPKPSDRAQVQSK 60 Query: 205 SVRLPDSPPISLDDQDVQIALKLSDDLHLNEVDCVRLLVAANQEWGLMGREPLEILRLAA 26 +RLPDS PISLDDQDV I+LKLSD+LHLNE+D VRLLV+ANQEWGLMGR+PLEI RLA Sbjct: 61 EIRLPDSLPISLDDQDVAISLKLSDELHLNEIDSVRLLVSANQEWGLMGRDPLEIQRLAT 120 Query: 25 GLWYTERR 2 GLWYT RR Sbjct: 121 GLWYTGRR 128