BLASTX nr result

ID: Glycyrrhiza24_contig00027788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027788
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-l...   115   4e-24
ref|XP_003590707.1| ATP-dependent DNA helicase pcrA [Medicago tr...   112   4e-23

>ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-like [Glycine max]
          Length = 1123

 Score =  115 bits (288), Expect = 4e-24
 Identities = 66/104 (63%), Positives = 81/104 (77%)
 Frame = +3

Query: 3   HSNQIKGAGNVDAALRVTVAKRVPLAEVPLNRPNATGNGHGAIAASDAIHCSSSARTIAA 182
           H ++IK AG+V +   V+VAKRVPLAEVPLNR NA G+ HG   + DAIH S SART++ 
Sbjct: 32  HPHRIKSAGDVAS---VSVAKRVPLAEVPLNRLNAIGSVHG--PSPDAIHSSFSARTVSV 86

Query: 183 PSVGAAAKENLCQSNFETPRKEPEGSSKPEPLDYFSGSGLLDDD 314
           P+VG +A ENLC+S FETPR+EPEG SKP+ LD FS +GLLDDD
Sbjct: 87  PAVG-SADENLCRSLFETPRREPEG-SKPKQLDCFSTTGLLDDD 128


>ref|XP_003590707.1| ATP-dependent DNA helicase pcrA [Medicago truncatula]
           gi|355479755|gb|AES60958.1| ATP-dependent DNA helicase
           pcrA [Medicago truncatula]
          Length = 906

 Score =  112 bits (279), Expect = 4e-23
 Identities = 66/102 (64%), Positives = 75/102 (73%), Gaps = 1/102 (0%)
 Frame = +3

Query: 12  QIKGAGNVDAAL-RVTVAKRVPLAEVPLNRPNATGNGHGAIAASDAIHCSSSARTIAAPS 188
           QIK   +VD A  RV V KRVPLAEVPLNR +++GNG    A+SD I CSSSART+  P+
Sbjct: 35  QIKSLCDVDGAKGRVRVGKRVPLAEVPLNRLHSSGNG--GEASSDVICCSSSARTVVVPA 92

Query: 189 VGAAAKENLCQSNFETPRKEPEGSSKPEPLDYFSGSGLLDDD 314
           V +A KENLCQSNFETPRKE  G  + E LDYF  SGLLDDD
Sbjct: 93  V-SAVKENLCQSNFETPRKE-SGGFESESLDYFYASGLLDDD 132


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