BLASTX nr result
ID: Glycyrrhiza24_contig00027788
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00027788 (316 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-l... 115 4e-24 ref|XP_003590707.1| ATP-dependent DNA helicase pcrA [Medicago tr... 112 4e-23 >ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-like [Glycine max] Length = 1123 Score = 115 bits (288), Expect = 4e-24 Identities = 66/104 (63%), Positives = 81/104 (77%) Frame = +3 Query: 3 HSNQIKGAGNVDAALRVTVAKRVPLAEVPLNRPNATGNGHGAIAASDAIHCSSSARTIAA 182 H ++IK AG+V + V+VAKRVPLAEVPLNR NA G+ HG + DAIH S SART++ Sbjct: 32 HPHRIKSAGDVAS---VSVAKRVPLAEVPLNRLNAIGSVHG--PSPDAIHSSFSARTVSV 86 Query: 183 PSVGAAAKENLCQSNFETPRKEPEGSSKPEPLDYFSGSGLLDDD 314 P+VG +A ENLC+S FETPR+EPEG SKP+ LD FS +GLLDDD Sbjct: 87 PAVG-SADENLCRSLFETPRREPEG-SKPKQLDCFSTTGLLDDD 128 >ref|XP_003590707.1| ATP-dependent DNA helicase pcrA [Medicago truncatula] gi|355479755|gb|AES60958.1| ATP-dependent DNA helicase pcrA [Medicago truncatula] Length = 906 Score = 112 bits (279), Expect = 4e-23 Identities = 66/102 (64%), Positives = 75/102 (73%), Gaps = 1/102 (0%) Frame = +3 Query: 12 QIKGAGNVDAAL-RVTVAKRVPLAEVPLNRPNATGNGHGAIAASDAIHCSSSARTIAAPS 188 QIK +VD A RV V KRVPLAEVPLNR +++GNG A+SD I CSSSART+ P+ Sbjct: 35 QIKSLCDVDGAKGRVRVGKRVPLAEVPLNRLHSSGNG--GEASSDVICCSSSARTVVVPA 92 Query: 189 VGAAAKENLCQSNFETPRKEPEGSSKPEPLDYFSGSGLLDDD 314 V +A KENLCQSNFETPRKE G + E LDYF SGLLDDD Sbjct: 93 V-SAVKENLCQSNFETPRKE-SGGFESESLDYFYASGLLDDD 132