BLASTX nr result

ID: Glycyrrhiza24_contig00027723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027723
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001239651.1| uncharacterized protein LOC100784390 [Glycin...   219   2e-55
gb|AFC01199.1| eukaryotic translation initiation factor [Ammopip...   214   4e-54
ref|XP_003527483.1| PREDICTED: protein translation factor SUI1 h...   214   4e-54
ref|XP_002310460.1| predicted protein [Populus trichocarpa] gi|1...   212   3e-53
ref|XP_002310461.1| predicted protein [Populus trichocarpa] gi|2...   211   5e-53

>ref|NP_001239651.1| uncharacterized protein LOC100784390 [Glycine max]
           gi|255637282|gb|ACU18971.1| unknown [Glycine max]
          Length = 113

 Score =  219 bits (558), Expect = 2e-55
 Identities = 108/110 (98%), Positives = 110/110 (100%)
 Frame = -1

Query: 330 MSEFDTHIPTAFDPFAEANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYSKIL 151
           MSEFDT+IPTAFDPFAEANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYSKIL
Sbjct: 1   MSEFDTNIPTAFDPFAEANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 150 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKI 1
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIK+
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKL 110


>gb|AFC01199.1| eukaryotic translation initiation factor [Ammopiptanthus
           mongolicus]
          Length = 113

 Score =  214 bits (546), Expect = 4e-54
 Identities = 106/110 (96%), Positives = 109/110 (99%)
 Frame = -1

Query: 330 MSEFDTHIPTAFDPFAEANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYSKIL 151
           MSEFDT+IPT FDPFAEANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSY+KIL
Sbjct: 1   MSEFDTNIPTTFDPFAEANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 150 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKI 1
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKE+IKI
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKI 110


>ref|XP_003527483.1| PREDICTED: protein translation factor SUI1 homolog isoform 1
           [Glycine max] gi|356517618|ref|XP_003527484.1|
           PREDICTED: protein translation factor SUI1 homolog
           isoform 2 [Glycine max]
          Length = 113

 Score =  214 bits (546), Expect = 4e-54
 Identities = 105/110 (95%), Positives = 110/110 (100%)
 Frame = -1

Query: 330 MSEFDTHIPTAFDPFAEANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYSKIL 151
           MSEFDT+IPTAFDPFA+ANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYSKIL
Sbjct: 1   MSEFDTNIPTAFDPFADANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 150 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKI 1
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFL+QAGIVKKE+IK+
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLMQAGIVKKEYIKL 110


>ref|XP_002310460.1| predicted protein [Populus trichocarpa] gi|118487406|gb|ABK95531.1|
           unknown [Populus trichocarpa]
           gi|222853363|gb|EEE90910.1| predicted protein [Populus
           trichocarpa]
          Length = 113

 Score =  212 bits (539), Expect = 3e-53
 Identities = 105/110 (95%), Positives = 108/110 (98%)
 Frame = -1

Query: 330 MSEFDTHIPTAFDPFAEANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYSKIL 151
           MSEFD  IPTAFDPFAEANAEDSGAGTK+YVHVRVQQRNGRKSLTTVQGLKKEYSY+KIL
Sbjct: 1   MSEFDNAIPTAFDPFAEANAEDSGAGTKDYVHVRVQQRNGRKSLTTVQGLKKEYSYNKIL 60

Query: 150 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKI 1
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKE+IKI
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKI 110


>ref|XP_002310461.1| predicted protein [Populus trichocarpa] gi|222853364|gb|EEE90911.1|
           predicted protein [Populus trichocarpa]
          Length = 113

 Score =  211 bits (537), Expect = 5e-53
 Identities = 105/110 (95%), Positives = 107/110 (97%)
 Frame = -1

Query: 330 MSEFDTHIPTAFDPFAEANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYSKIL 151
           MSEFD  IPTAFDPFAEANAEDSGAGTK+YVHVRVQQRNGRKSLTTVQGLKKEYSY+KIL
Sbjct: 1   MSEFDNAIPTAFDPFAEANAEDSGAGTKDYVHVRVQQRNGRKSLTTVQGLKKEYSYNKIL 60

Query: 150 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKI 1
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKE IKI
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKESIKI 110


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