BLASTX nr result

ID: Glycyrrhiza24_contig00027702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027702
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica...   238   4e-61
ref|XP_003638253.1| ATP-dependent RNA helicase A-like protein [M...   238   5e-61
emb|CBI18267.3| unnamed protein product [Vitis vinifera]              232   2e-59
ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helica...   232   2e-59
ref|XP_002310975.1| predicted protein [Populus trichocarpa] gi|2...   228   3e-58

>ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
           max]
          Length = 1161

 Score =  238 bits (607), Expect = 4e-61
 Identities = 117/149 (78%), Positives = 121/149 (81%)
 Frame = +3

Query: 3   LGETVGFKVRLEGMRGKNTHLLFCTSGIXXXXXXXXXXXXGITHVFVDEIHERGMNEDFL 182
           LGETVGFKVRLEGM+GKNTHLLFCTSGI            GITHVFVDEIHERGMNEDFL
Sbjct: 340 LGETVGFKVRLEGMKGKNTHLLFCTSGILLRRLLSDRNLNGITHVFVDEIHERGMNEDFL 399

Query: 183 LIXXXXXXXXXXXXXXXXMSATLNAELFSNFFGGAPTFHIPGFTYPVRAHFLEDVLEMTG 362
           LI                MSATLNAELFSN+FGGAPTFHIPGFTYPVRAHFLED+LEMTG
Sbjct: 400 LIVLKDLLPRRRDLRLVLMSATLNAELFSNYFGGAPTFHIPGFTYPVRAHFLEDILEMTG 459

Query: 363 YKLTSFNQVDDYGQEKLWKTQKQLAPRKR 449
           YKLTSFNQ+DDYGQEKLWKTQKQLAPRKR
Sbjct: 460 YKLTSFNQIDDYGQEKLWKTQKQLAPRKR 488


>ref|XP_003638253.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
           gi|355504188|gb|AES85391.1| ATP-dependent RNA helicase
           A-like protein [Medicago truncatula]
          Length = 268

 Score =  238 bits (606), Expect = 5e-61
 Identities = 118/149 (79%), Positives = 121/149 (81%)
 Frame = +3

Query: 3   LGETVGFKVRLEGMRGKNTHLLFCTSGIXXXXXXXXXXXXGITHVFVDEIHERGMNEDFL 182
           LGETVGFKVRLEGMRGKNTHLLFCTSGI            GITHVFVDEIHERGMNEDFL
Sbjct: 89  LGETVGFKVRLEGMRGKNTHLLFCTSGILLRRLLSDRNLSGITHVFVDEIHERGMNEDFL 148

Query: 183 LIXXXXXXXXXXXXXXXXMSATLNAELFSNFFGGAPTFHIPGFTYPVRAHFLEDVLEMTG 362
           LI                MSATLNAELFSN+FGGAPTFHIPGFTYPVRAHFLEDVLEMTG
Sbjct: 149 LIVLKDLLPRRRDLRLVLMSATLNAELFSNYFGGAPTFHIPGFTYPVRAHFLEDVLEMTG 208

Query: 363 YKLTSFNQVDDYGQEKLWKTQKQLAPRKR 449
           YK+TSFNQVDDYGQ+KLWKTQKQLAPRKR
Sbjct: 209 YKVTSFNQVDDYGQDKLWKTQKQLAPRKR 237


>emb|CBI18267.3| unnamed protein product [Vitis vinifera]
          Length = 1162

 Score =  232 bits (592), Expect = 2e-59
 Identities = 114/149 (76%), Positives = 119/149 (79%)
 Frame = +3

Query: 3   LGETVGFKVRLEGMRGKNTHLLFCTSGIXXXXXXXXXXXXGITHVFVDEIHERGMNEDFL 182
           LGE+VG+KVRLEGM+GKNTHLLFCTSGI            GITHVFVDEIHERGMNEDFL
Sbjct: 315 LGESVGYKVRLEGMKGKNTHLLFCTSGILLRRLLSDRNLNGITHVFVDEIHERGMNEDFL 374

Query: 183 LIXXXXXXXXXXXXXXXXMSATLNAELFSNFFGGAPTFHIPGFTYPVRAHFLEDVLEMTG 362
           LI                MSATLNAELFSNFFGGAPT HIPGFTYPVRAHFLEDVLEMTG
Sbjct: 375 LIVLKDLLPRRRDLRLILMSATLNAELFSNFFGGAPTIHIPGFTYPVRAHFLEDVLEMTG 434

Query: 363 YKLTSFNQVDDYGQEKLWKTQKQLAPRKR 449
           YKLTSFNQ+DDYGQEK+WKTQKQL PRKR
Sbjct: 435 YKLTSFNQIDDYGQEKMWKTQKQLVPRKR 463


>ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis
           vinifera]
          Length = 1136

 Score =  232 bits (592), Expect = 2e-59
 Identities = 114/149 (76%), Positives = 119/149 (79%)
 Frame = +3

Query: 3   LGETVGFKVRLEGMRGKNTHLLFCTSGIXXXXXXXXXXXXGITHVFVDEIHERGMNEDFL 182
           LGE+VG+KVRLEGM+GKNTHLLFCTSGI            GITHVFVDEIHERGMNEDFL
Sbjct: 315 LGESVGYKVRLEGMKGKNTHLLFCTSGILLRRLLSDRNLNGITHVFVDEIHERGMNEDFL 374

Query: 183 LIXXXXXXXXXXXXXXXXMSATLNAELFSNFFGGAPTFHIPGFTYPVRAHFLEDVLEMTG 362
           LI                MSATLNAELFSNFFGGAPT HIPGFTYPVRAHFLEDVLEMTG
Sbjct: 375 LIVLKDLLPRRRDLRLILMSATLNAELFSNFFGGAPTIHIPGFTYPVRAHFLEDVLEMTG 434

Query: 363 YKLTSFNQVDDYGQEKLWKTQKQLAPRKR 449
           YKLTSFNQ+DDYGQEK+WKTQKQL PRKR
Sbjct: 435 YKLTSFNQIDDYGQEKMWKTQKQLVPRKR 463


>ref|XP_002310975.1| predicted protein [Populus trichocarpa] gi|222850795|gb|EEE88342.1|
           predicted protein [Populus trichocarpa]
          Length = 1020

 Score =  228 bits (582), Expect = 3e-58
 Identities = 111/149 (74%), Positives = 119/149 (79%)
 Frame = +3

Query: 3   LGETVGFKVRLEGMRGKNTHLLFCTSGIXXXXXXXXXXXXGITHVFVDEIHERGMNEDFL 182
           LGE VG+KVRLEG++G+NTHLLFCTSGI            GITHVFVDEIHERGMNEDFL
Sbjct: 235 LGEAVGYKVRLEGVKGRNTHLLFCTSGILLRRLLSDRNLNGITHVFVDEIHERGMNEDFL 294

Query: 183 LIXXXXXXXXXXXXXXXXMSATLNAELFSNFFGGAPTFHIPGFTYPVRAHFLEDVLEMTG 362
           LI                MSATLNAELFSN+FGGAPT HIPGFTYPVRAHFLEDVLEMTG
Sbjct: 295 LIVLKDLLSRRRDLRLILMSATLNAELFSNYFGGAPTIHIPGFTYPVRAHFLEDVLEMTG 354

Query: 363 YKLTSFNQVDDYGQEKLWKTQKQLAPRKR 449
           YKLTSFNQ+DDYGQEK+WKTQ+QLAPRKR
Sbjct: 355 YKLTSFNQIDDYGQEKMWKTQRQLAPRKR 383


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