BLASTX nr result
ID: Glycyrrhiza24_contig00027702
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00027702 (451 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica... 238 4e-61 ref|XP_003638253.1| ATP-dependent RNA helicase A-like protein [M... 238 5e-61 emb|CBI18267.3| unnamed protein product [Vitis vinifera] 232 2e-59 ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helica... 232 2e-59 ref|XP_002310975.1| predicted protein [Populus trichocarpa] gi|2... 228 3e-58 >ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine max] Length = 1161 Score = 238 bits (607), Expect = 4e-61 Identities = 117/149 (78%), Positives = 121/149 (81%) Frame = +3 Query: 3 LGETVGFKVRLEGMRGKNTHLLFCTSGIXXXXXXXXXXXXGITHVFVDEIHERGMNEDFL 182 LGETVGFKVRLEGM+GKNTHLLFCTSGI GITHVFVDEIHERGMNEDFL Sbjct: 340 LGETVGFKVRLEGMKGKNTHLLFCTSGILLRRLLSDRNLNGITHVFVDEIHERGMNEDFL 399 Query: 183 LIXXXXXXXXXXXXXXXXMSATLNAELFSNFFGGAPTFHIPGFTYPVRAHFLEDVLEMTG 362 LI MSATLNAELFSN+FGGAPTFHIPGFTYPVRAHFLED+LEMTG Sbjct: 400 LIVLKDLLPRRRDLRLVLMSATLNAELFSNYFGGAPTFHIPGFTYPVRAHFLEDILEMTG 459 Query: 363 YKLTSFNQVDDYGQEKLWKTQKQLAPRKR 449 YKLTSFNQ+DDYGQEKLWKTQKQLAPRKR Sbjct: 460 YKLTSFNQIDDYGQEKLWKTQKQLAPRKR 488 >ref|XP_003638253.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula] gi|355504188|gb|AES85391.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula] Length = 268 Score = 238 bits (606), Expect = 5e-61 Identities = 118/149 (79%), Positives = 121/149 (81%) Frame = +3 Query: 3 LGETVGFKVRLEGMRGKNTHLLFCTSGIXXXXXXXXXXXXGITHVFVDEIHERGMNEDFL 182 LGETVGFKVRLEGMRGKNTHLLFCTSGI GITHVFVDEIHERGMNEDFL Sbjct: 89 LGETVGFKVRLEGMRGKNTHLLFCTSGILLRRLLSDRNLSGITHVFVDEIHERGMNEDFL 148 Query: 183 LIXXXXXXXXXXXXXXXXMSATLNAELFSNFFGGAPTFHIPGFTYPVRAHFLEDVLEMTG 362 LI MSATLNAELFSN+FGGAPTFHIPGFTYPVRAHFLEDVLEMTG Sbjct: 149 LIVLKDLLPRRRDLRLVLMSATLNAELFSNYFGGAPTFHIPGFTYPVRAHFLEDVLEMTG 208 Query: 363 YKLTSFNQVDDYGQEKLWKTQKQLAPRKR 449 YK+TSFNQVDDYGQ+KLWKTQKQLAPRKR Sbjct: 209 YKVTSFNQVDDYGQDKLWKTQKQLAPRKR 237 >emb|CBI18267.3| unnamed protein product [Vitis vinifera] Length = 1162 Score = 232 bits (592), Expect = 2e-59 Identities = 114/149 (76%), Positives = 119/149 (79%) Frame = +3 Query: 3 LGETVGFKVRLEGMRGKNTHLLFCTSGIXXXXXXXXXXXXGITHVFVDEIHERGMNEDFL 182 LGE+VG+KVRLEGM+GKNTHLLFCTSGI GITHVFVDEIHERGMNEDFL Sbjct: 315 LGESVGYKVRLEGMKGKNTHLLFCTSGILLRRLLSDRNLNGITHVFVDEIHERGMNEDFL 374 Query: 183 LIXXXXXXXXXXXXXXXXMSATLNAELFSNFFGGAPTFHIPGFTYPVRAHFLEDVLEMTG 362 LI MSATLNAELFSNFFGGAPT HIPGFTYPVRAHFLEDVLEMTG Sbjct: 375 LIVLKDLLPRRRDLRLILMSATLNAELFSNFFGGAPTIHIPGFTYPVRAHFLEDVLEMTG 434 Query: 363 YKLTSFNQVDDYGQEKLWKTQKQLAPRKR 449 YKLTSFNQ+DDYGQEK+WKTQKQL PRKR Sbjct: 435 YKLTSFNQIDDYGQEKMWKTQKQLVPRKR 463 >ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis vinifera] Length = 1136 Score = 232 bits (592), Expect = 2e-59 Identities = 114/149 (76%), Positives = 119/149 (79%) Frame = +3 Query: 3 LGETVGFKVRLEGMRGKNTHLLFCTSGIXXXXXXXXXXXXGITHVFVDEIHERGMNEDFL 182 LGE+VG+KVRLEGM+GKNTHLLFCTSGI GITHVFVDEIHERGMNEDFL Sbjct: 315 LGESVGYKVRLEGMKGKNTHLLFCTSGILLRRLLSDRNLNGITHVFVDEIHERGMNEDFL 374 Query: 183 LIXXXXXXXXXXXXXXXXMSATLNAELFSNFFGGAPTFHIPGFTYPVRAHFLEDVLEMTG 362 LI MSATLNAELFSNFFGGAPT HIPGFTYPVRAHFLEDVLEMTG Sbjct: 375 LIVLKDLLPRRRDLRLILMSATLNAELFSNFFGGAPTIHIPGFTYPVRAHFLEDVLEMTG 434 Query: 363 YKLTSFNQVDDYGQEKLWKTQKQLAPRKR 449 YKLTSFNQ+DDYGQEK+WKTQKQL PRKR Sbjct: 435 YKLTSFNQIDDYGQEKMWKTQKQLVPRKR 463 >ref|XP_002310975.1| predicted protein [Populus trichocarpa] gi|222850795|gb|EEE88342.1| predicted protein [Populus trichocarpa] Length = 1020 Score = 228 bits (582), Expect = 3e-58 Identities = 111/149 (74%), Positives = 119/149 (79%) Frame = +3 Query: 3 LGETVGFKVRLEGMRGKNTHLLFCTSGIXXXXXXXXXXXXGITHVFVDEIHERGMNEDFL 182 LGE VG+KVRLEG++G+NTHLLFCTSGI GITHVFVDEIHERGMNEDFL Sbjct: 235 LGEAVGYKVRLEGVKGRNTHLLFCTSGILLRRLLSDRNLNGITHVFVDEIHERGMNEDFL 294 Query: 183 LIXXXXXXXXXXXXXXXXMSATLNAELFSNFFGGAPTFHIPGFTYPVRAHFLEDVLEMTG 362 LI MSATLNAELFSN+FGGAPT HIPGFTYPVRAHFLEDVLEMTG Sbjct: 295 LIVLKDLLSRRRDLRLILMSATLNAELFSNYFGGAPTIHIPGFTYPVRAHFLEDVLEMTG 354 Query: 363 YKLTSFNQVDDYGQEKLWKTQKQLAPRKR 449 YKLTSFNQ+DDYGQEK+WKTQ+QLAPRKR Sbjct: 355 YKLTSFNQIDDYGQEKMWKTQRQLAPRKR 383