BLASTX nr result
ID: Glycyrrhiza24_contig00027689
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00027689 (349 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003598615.1| Chromatin remodeling complex subunit, partia... 83 5e-32 ref|XP_003539248.1| PREDICTED: F-box protein At3g54460-like [Gly... 83 2e-25 ref|XP_003522244.1| PREDICTED: F-box protein At3g54460-like [Gly... 76 5e-24 >ref|XP_003598615.1| Chromatin remodeling complex subunit, partial [Medicago truncatula] gi|355487663|gb|AES68866.1| Chromatin remodeling complex subunit, partial [Medicago truncatula] Length = 651 Score = 83.2 bits (204), Expect(2) = 5e-32 Identities = 38/60 (63%), Positives = 48/60 (80%) Frame = +3 Query: 6 RDDDNHEHYSKRSKLMDPGQKITKPQDSCSVQENKSPVDACFEESMPASRCTRRLSRIKK 185 R ++NH+ S+R+KL++P Q+ITKP DSCSV E+ SP DAC EE PASRCTR LSR+KK Sbjct: 422 RSNENHDFSSERAKLLNPDQEITKPHDSCSVGEDTSPPDACSEEYSPASRCTRSLSRVKK 481 Score = 79.7 bits (195), Expect(2) = 5e-32 Identities = 42/57 (73%), Positives = 46/57 (80%) Frame = +2 Query: 179 KENLYFTDEEEAMISKERKVVERPIKTKHASDVASCVSQNKLVDTSYRCEQSYKWPG 349 K+NLYFT +EEAMIS R+V +R IKTKHASDVAS VSQNKLVDTSY QSYK G Sbjct: 480 KKNLYFTYDEEAMISNGRRVGKRSIKTKHASDVASHVSQNKLVDTSYGSRQSYKLHG 536 >ref|XP_003539248.1| PREDICTED: F-box protein At3g54460-like [Glycine max] Length = 1329 Score = 82.8 bits (203), Expect(2) = 2e-25 Identities = 39/61 (63%), Positives = 51/61 (83%) Frame = +3 Query: 3 SRDDDNHEHYSKRSKLMDPGQKITKPQDSCSVQENKSPVDACFEESMPASRCTRRLSRIK 182 SR +DNH++ SKR++L+DP Q+ITK DSCS +ENKSPVDACF+ESM +++ T LSRIK Sbjct: 418 SRTNDNHDYSSKRARLIDPDQQITKLHDSCSREENKSPVDACFKESMHSNQFTGSLSRIK 477 Query: 183 K 185 K Sbjct: 478 K 478 Score = 58.2 bits (139), Expect(2) = 2e-25 Identities = 33/66 (50%), Positives = 41/66 (62%), Gaps = 11/66 (16%) Frame = +2 Query: 179 KENLYFTDEEEAMISKERKVVERPIKTKHASDVASCVSQNK-----------LVDTSYRC 325 K+NL+FT E+EAMISKER++ E IK KHA DV S VSQNK DT +C Sbjct: 477 KKNLHFTFEDEAMISKEREIGEGLIKAKHALDVTSHVSQNKSPGKPKGDCFEYNDTWIQC 536 Query: 326 EQSYKW 343 + +KW Sbjct: 537 DACHKW 542 >ref|XP_003522244.1| PREDICTED: F-box protein At3g54460-like [Glycine max] Length = 1311 Score = 76.3 bits (186), Expect(2) = 5e-24 Identities = 36/61 (59%), Positives = 49/61 (80%) Frame = +3 Query: 3 SRDDDNHEHYSKRSKLMDPGQKITKPQDSCSVQENKSPVDACFEESMPASRCTRRLSRIK 182 SR +DNH++ SKR++L P Q+I+K DSCS +ENKSPVDACF+E M +++ T+ LSRIK Sbjct: 412 SRTNDNHDYSSKRARLTYPDQQISKLHDSCSREENKSPVDACFKEYMHSNQFTKSLSRIK 471 Query: 183 K 185 K Sbjct: 472 K 472 Score = 59.7 bits (143), Expect(2) = 5e-24 Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 11/66 (16%) Frame = +2 Query: 179 KENLYFTDEEEAMISKERKVVERPIKTKHASDVASCVSQNKL-----------VDTSYRC 325 K++L+FT EEEAMI KER++ E IK KHASDV S VSQNKL DT +C Sbjct: 471 KKSLHFTFEEEAMIFKEREIGEGLIKAKHASDVTSHVSQNKLPGKPKGDRFEYSDTWIQC 530 Query: 326 EQSYKW 343 + +KW Sbjct: 531 DACHKW 536