BLASTX nr result

ID: Glycyrrhiza24_contig00027678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027678
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527835.1| PREDICTED: lissencephaly-1 homolog [Glycine ...   183   1e-44
ref|XP_003523738.1| PREDICTED: LOW QUALITY PROTEIN: lissencephal...   179   2e-43
ref|XP_002281362.2| PREDICTED: uncharacterized WD repeat-contain...   149   2e-34
emb|CBI20863.3| unnamed protein product [Vitis vinifera]              149   2e-34
emb|CAN66946.1| hypothetical protein VITISV_020093 [Vitis vinifera]   149   2e-34

>ref|XP_003527835.1| PREDICTED: lissencephaly-1 homolog [Glycine max]
          Length = 457

 Score =  183 bits (464), Expect = 1e-44
 Identities = 89/107 (83%), Positives = 98/107 (91%)
 Frame = -1

Query: 342 IASLHRHEGNIYAIAASNKGLVFTGSNSTRIRVWKQPDCMDKGYLRASSGEVRAVLAYNN 163
           IASLHRHEGNIYAIAAS KGLVFTGSNS+RIRVWKQPDCMD+GYL+ASSGEVRA+LAY+N
Sbjct: 82  IASLHRHEGNIYAIAASTKGLVFTGSNSSRIRVWKQPDCMDRGYLKASSGEVRAILAYSN 141

Query: 162 MLFSTHKDHKIRIWNFTVSETFKSKKVGTLPRNTSVVLSMFQRGKKS 22
           MLFSTHKDHKIRIW FTVS++FKSKKVGTLPR TS +L    RGK +
Sbjct: 142 MLFSTHKDHKIRIWTFTVSDSFKSKKVGTLPRKTS-ILMFPSRGKNT 187


>ref|XP_003523738.1| PREDICTED: LOW QUALITY PROTEIN: lissencephaly-1 homolog [Glycine
           max]
          Length = 448

 Score =  179 bits (454), Expect = 2e-43
 Identities = 89/107 (83%), Positives = 99/107 (92%)
 Frame = -1

Query: 342 IASLHRHEGNIYAIAASNKGLVFTGSNSTRIRVWKQPDCMDKGYLRASSGEVRAVLAYNN 163
           IASLHRHEGNIYAIAAS KGLVFTGSNS+RIRVWKQPDCMD+GYL+ASSGEVRA+LAY+N
Sbjct: 84  IASLHRHEGNIYAIAAS-KGLVFTGSNSSRIRVWKQPDCMDRGYLKASSGEVRAILAYSN 142

Query: 162 MLFSTHKDHKIRIWNFTVSETFKSKKVGTLPRNTSVVLSMFQRGKKS 22
           MLFSTHKDHKIRIW FTVS++FKSKKVGTLPR TS++L    RGK +
Sbjct: 143 MLFSTHKDHKIRIWTFTVSDSFKSKKVGTLPRKTSILL-FPSRGKNT 188


>ref|XP_002281362.2| PREDICTED: uncharacterized WD repeat-containing protein
           alr2800-like [Vitis vinifera]
          Length = 400

 Score =  149 bits (377), Expect = 2e-34
 Identities = 68/98 (69%), Positives = 88/98 (89%)
 Frame = -1

Query: 342 IASLHRHEGNIYAIAASNKGLVFTGSNSTRIRVWKQPDCMDKGYLRASSGEVRAVLAYNN 163
           IASLHRHEGNIY+IA S +GLVFTGS S+R+RVW+QPDC+++GYL+ASSGEVRA+L Y N
Sbjct: 30  IASLHRHEGNIYSIAVS-RGLVFTGSESSRVRVWRQPDCIERGYLKASSGEVRAILGYGN 88

Query: 162 MLFSTHKDHKIRIWNFTVSETFKSKKVGTLPRNTSVVL 49
           MLF+TH+D+KIR+WN T S++F+SKKV TLPR +S+ +
Sbjct: 89  MLFTTHRDNKIRMWNVTNSDSFRSKKVSTLPRRSSLFI 126


>emb|CBI20863.3| unnamed protein product [Vitis vinifera]
          Length = 448

 Score =  149 bits (377), Expect = 2e-34
 Identities = 68/98 (69%), Positives = 88/98 (89%)
 Frame = -1

Query: 342 IASLHRHEGNIYAIAASNKGLVFTGSNSTRIRVWKQPDCMDKGYLRASSGEVRAVLAYNN 163
           IASLHRHEGNIY+IA S +GLVFTGS S+R+RVW+QPDC+++GYL+ASSGEVRA+L Y N
Sbjct: 78  IASLHRHEGNIYSIAVS-RGLVFTGSESSRVRVWRQPDCIERGYLKASSGEVRAILGYGN 136

Query: 162 MLFSTHKDHKIRIWNFTVSETFKSKKVGTLPRNTSVVL 49
           MLF+TH+D+KIR+WN T S++F+SKKV TLPR +S+ +
Sbjct: 137 MLFTTHRDNKIRMWNVTNSDSFRSKKVSTLPRRSSLFI 174


>emb|CAN66946.1| hypothetical protein VITISV_020093 [Vitis vinifera]
          Length = 432

 Score =  149 bits (377), Expect = 2e-34
 Identities = 68/98 (69%), Positives = 88/98 (89%)
 Frame = -1

Query: 342 IASLHRHEGNIYAIAASNKGLVFTGSNSTRIRVWKQPDCMDKGYLRASSGEVRAVLAYNN 163
           IASLHRHEGNIY+IA S +GLVFTGS S+R+RVW+QPDC+++GYL+ASSGEVRA+L Y N
Sbjct: 78  IASLHRHEGNIYSIAVS-RGLVFTGSESSRVRVWRQPDCIERGYLKASSGEVRAILGYGN 136

Query: 162 MLFSTHKDHKIRIWNFTVSETFKSKKVGTLPRNTSVVL 49
           MLF+TH+D+KIR+WN T S++F+SKKV TLPR +S+ +
Sbjct: 137 MLFTTHRDNKIRMWNVTNSDSFRSKKVSTLPRRSSLFI 174


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