BLASTX nr result
ID: Glycyrrhiza24_contig00027641
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00027641 (247 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003554878.1| PREDICTED: nuclear distribution protein PAC1... 138 4e-31 ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Gly... 134 6e-30 ref|XP_002324039.1| f-box family protein [Populus trichocarpa] g... 117 7e-25 ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c... 116 2e-24 emb|CBI22162.3| unnamed protein product [Vitis vinifera] 116 2e-24 >ref|XP_003554878.1| PREDICTED: nuclear distribution protein PAC1-like [Glycine max] Length = 452 Score = 138 bits (348), Expect = 4e-31 Identities = 67/82 (81%), Positives = 71/82 (86%) Frame = +2 Query: 2 DIRRNQELLKPEPMAELDGHCGPVTKLYMDQYKIVTGGPDDAYVNVWEVGTGEQTNSLLC 181 D+RRNQE LKPEP+AELDGHCG VT L+MD YKIVTGGPD+AYVNVWEV TG QTNSLLC Sbjct: 326 DVRRNQESLKPEPIAELDGHCGQVTLLHMDPYKIVTGGPDNAYVNVWEVDTGVQTNSLLC 385 Query: 182 CLTEEDGFRSGCDAMAVDGCRI 247 LT DG SGCDAMAVDGCRI Sbjct: 386 SLT--DGAGSGCDAMAVDGCRI 405 >ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Glycine max] Length = 501 Score = 134 bits (338), Expect = 6e-30 Identities = 64/82 (78%), Positives = 70/82 (85%) Frame = +2 Query: 2 DIRRNQELLKPEPMAELDGHCGPVTKLYMDQYKIVTGGPDDAYVNVWEVGTGEQTNSLLC 181 D+RRNQE LKPEP+AELDGHCG VT L+MD YKIVTGGPD+AYVNVWEV TG QTNSLLC Sbjct: 376 DVRRNQESLKPEPIAELDGHCGQVTLLHMDPYKIVTGGPDNAYVNVWEVDTGVQTNSLLC 435 Query: 182 CLTEEDGFRSGCDAMAVDGCRI 247 T++ G SGCDAM VDGCRI Sbjct: 436 SSTDDAG--SGCDAMTVDGCRI 455 >ref|XP_002324039.1| f-box family protein [Populus trichocarpa] gi|222867041|gb|EEF04172.1| f-box family protein [Populus trichocarpa] Length = 498 Score = 117 bits (294), Expect = 7e-25 Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%) Frame = +2 Query: 2 DIRRNQELLKPEPMAELDGHCGPVTKLYMDQYKIVTGGPDDAYVNVWEVGTGEQTNSLLC 181 DIR NQE LKPEP+AELDGH GPVT L+MD YKIVTGGP+D+Y+NVWE TG QTNS +C Sbjct: 367 DIRINQETLKPEPVAELDGHTGPVTLLHMDPYKIVTGGPEDSYINVWETDTGAQTNSFIC 426 Query: 182 CLTEEDGFRS--GCDAMAVDGCRI 247 C ++ S GC AMAV+G RI Sbjct: 427 CPSDAASSSSGMGCSAMAVNGTRI 450 >ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c [Vitis vinifera] Length = 494 Score = 116 bits (290), Expect = 2e-24 Identities = 53/82 (64%), Positives = 62/82 (75%) Frame = +2 Query: 2 DIRRNQELLKPEPMAELDGHCGPVTKLYMDQYKIVTGGPDDAYVNVWEVGTGEQTNSLLC 181 DIR++QE LKPEP+ E+DGH GPVT L+MD YKIVTGGP+D +VNVWE+ TG QTN+L C Sbjct: 363 DIRKSQETLKPEPVIEVDGHTGPVTLLHMDPYKIVTGGPEDDHVNVWELDTGTQTNTLAC 422 Query: 182 CLTEEDGFRSGCDAMAVDGCRI 247 E GC AMA DGCRI Sbjct: 423 SSDEGPNSNPGCSAMAADGCRI 444 >emb|CBI22162.3| unnamed protein product [Vitis vinifera] Length = 491 Score = 116 bits (290), Expect = 2e-24 Identities = 53/82 (64%), Positives = 62/82 (75%) Frame = +2 Query: 2 DIRRNQELLKPEPMAELDGHCGPVTKLYMDQYKIVTGGPDDAYVNVWEVGTGEQTNSLLC 181 DIR++QE LKPEP+ E+DGH GPVT L+MD YKIVTGGP+D +VNVWE+ TG QTN+L C Sbjct: 360 DIRKSQETLKPEPVIEVDGHTGPVTLLHMDPYKIVTGGPEDDHVNVWELDTGTQTNTLAC 419 Query: 182 CLTEEDGFRSGCDAMAVDGCRI 247 E GC AMA DGCRI Sbjct: 420 SSDEGPNSNPGCSAMAADGCRI 441