BLASTX nr result

ID: Glycyrrhiza24_contig00027641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027641
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554878.1| PREDICTED: nuclear distribution protein PAC1...   138   4e-31
ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Gly...   134   6e-30
ref|XP_002324039.1| f-box family protein [Populus trichocarpa] g...   117   7e-25
ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c...   116   2e-24
emb|CBI22162.3| unnamed protein product [Vitis vinifera]              116   2e-24

>ref|XP_003554878.1| PREDICTED: nuclear distribution protein PAC1-like [Glycine max]
          Length = 452

 Score =  138 bits (348), Expect = 4e-31
 Identities = 67/82 (81%), Positives = 71/82 (86%)
 Frame = +2

Query: 2   DIRRNQELLKPEPMAELDGHCGPVTKLYMDQYKIVTGGPDDAYVNVWEVGTGEQTNSLLC 181
           D+RRNQE LKPEP+AELDGHCG VT L+MD YKIVTGGPD+AYVNVWEV TG QTNSLLC
Sbjct: 326 DVRRNQESLKPEPIAELDGHCGQVTLLHMDPYKIVTGGPDNAYVNVWEVDTGVQTNSLLC 385

Query: 182 CLTEEDGFRSGCDAMAVDGCRI 247
            LT  DG  SGCDAMAVDGCRI
Sbjct: 386 SLT--DGAGSGCDAMAVDGCRI 405


>ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Glycine max]
          Length = 501

 Score =  134 bits (338), Expect = 6e-30
 Identities = 64/82 (78%), Positives = 70/82 (85%)
 Frame = +2

Query: 2   DIRRNQELLKPEPMAELDGHCGPVTKLYMDQYKIVTGGPDDAYVNVWEVGTGEQTNSLLC 181
           D+RRNQE LKPEP+AELDGHCG VT L+MD YKIVTGGPD+AYVNVWEV TG QTNSLLC
Sbjct: 376 DVRRNQESLKPEPIAELDGHCGQVTLLHMDPYKIVTGGPDNAYVNVWEVDTGVQTNSLLC 435

Query: 182 CLTEEDGFRSGCDAMAVDGCRI 247
             T++ G  SGCDAM VDGCRI
Sbjct: 436 SSTDDAG--SGCDAMTVDGCRI 455


>ref|XP_002324039.1| f-box family protein [Populus trichocarpa]
           gi|222867041|gb|EEF04172.1| f-box family protein
           [Populus trichocarpa]
          Length = 498

 Score =  117 bits (294), Expect = 7e-25
 Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
 Frame = +2

Query: 2   DIRRNQELLKPEPMAELDGHCGPVTKLYMDQYKIVTGGPDDAYVNVWEVGTGEQTNSLLC 181
           DIR NQE LKPEP+AELDGH GPVT L+MD YKIVTGGP+D+Y+NVWE  TG QTNS +C
Sbjct: 367 DIRINQETLKPEPVAELDGHTGPVTLLHMDPYKIVTGGPEDSYINVWETDTGAQTNSFIC 426

Query: 182 CLTEEDGFRS--GCDAMAVDGCRI 247
           C ++     S  GC AMAV+G RI
Sbjct: 427 CPSDAASSSSGMGCSAMAVNGTRI 450


>ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c [Vitis vinifera]
          Length = 494

 Score =  116 bits (290), Expect = 2e-24
 Identities = 53/82 (64%), Positives = 62/82 (75%)
 Frame = +2

Query: 2   DIRRNQELLKPEPMAELDGHCGPVTKLYMDQYKIVTGGPDDAYVNVWEVGTGEQTNSLLC 181
           DIR++QE LKPEP+ E+DGH GPVT L+MD YKIVTGGP+D +VNVWE+ TG QTN+L C
Sbjct: 363 DIRKSQETLKPEPVIEVDGHTGPVTLLHMDPYKIVTGGPEDDHVNVWELDTGTQTNTLAC 422

Query: 182 CLTEEDGFRSGCDAMAVDGCRI 247
              E      GC AMA DGCRI
Sbjct: 423 SSDEGPNSNPGCSAMAADGCRI 444


>emb|CBI22162.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  116 bits (290), Expect = 2e-24
 Identities = 53/82 (64%), Positives = 62/82 (75%)
 Frame = +2

Query: 2   DIRRNQELLKPEPMAELDGHCGPVTKLYMDQYKIVTGGPDDAYVNVWEVGTGEQTNSLLC 181
           DIR++QE LKPEP+ E+DGH GPVT L+MD YKIVTGGP+D +VNVWE+ TG QTN+L C
Sbjct: 360 DIRKSQETLKPEPVIEVDGHTGPVTLLHMDPYKIVTGGPEDDHVNVWELDTGTQTNTLAC 419

Query: 182 CLTEEDGFRSGCDAMAVDGCRI 247
              E      GC AMA DGCRI
Sbjct: 420 SSDEGPNSNPGCSAMAADGCRI 441


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