BLASTX nr result

ID: Glycyrrhiza24_contig00027637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027637
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242229.1| uncharacterized protein LOC100787799 [Glycin...    81   8e-14
ref|XP_003546494.1| PREDICTED: zinc finger CCCH domain-containin...    79   5e-13
ref|XP_003546490.1| PREDICTED: zinc finger CCCH domain-containin...    79   5e-13
ref|XP_003519245.1| PREDICTED: zinc finger CCCH domain-containin...    78   9e-13
ref|XP_003546495.1| PREDICTED: zinc finger CCCH domain-containin...    77   2e-12

>ref|NP_001242229.1| uncharacterized protein LOC100787799 [Glycine max]
           gi|255640231|gb|ACU20406.1| unknown [Glycine max]
          Length = 421

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 44/80 (55%), Positives = 47/80 (58%)
 Frame = +1

Query: 82  MDMKVARRTERVGGTTCVYWLAGRCNRNPCRFLHRETPFPSXXXXXXXXXXXXXXXXXXX 261
           M+ K ARRTER+GGT C YW AGRCNRNPCRFLH ETP P                    
Sbjct: 1   MNTKFARRTERIGGTACAYWRAGRCNRNPCRFLHIETPSP-----PTACGYVNTAYRYGK 55

Query: 262 KHHSSPEKTLPKDNSKTVLI 321
           K HSS E T PK +SKT LI
Sbjct: 56  KPHSSSENT-PKYSSKTALI 74


>ref|XP_003546494.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
           [Glycine max]
          Length = 421

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 43/80 (53%), Positives = 45/80 (56%)
 Frame = +1

Query: 82  MDMKVARRTERVGGTTCVYWLAGRCNRNPCRFLHRETPFPSXXXXXXXXXXXXXXXXXXX 261
           MD K ARRTER+G TTC YW AGRCNRNPCRFLH ETP P                    
Sbjct: 1   MDTKFARRTERIGSTTCSYWRAGRCNRNPCRFLHIETPSP-----PAACGYGNTAYSYGK 55

Query: 262 KHHSSPEKTLPKDNSKTVLI 321
           K HSS E T PK  SK  L+
Sbjct: 56  KPHSSSENT-PKYGSKKALL 74


>ref|XP_003546490.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
           [Glycine max]
          Length = 421

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 43/80 (53%), Positives = 45/80 (56%)
 Frame = +1

Query: 82  MDMKVARRTERVGGTTCVYWLAGRCNRNPCRFLHRETPFPSXXXXXXXXXXXXXXXXXXX 261
           MD K ARRTER+G TTC YW AGRCNRNPCRFLH ETP P                    
Sbjct: 1   MDTKFARRTERIGSTTCSYWRAGRCNRNPCRFLHIETPSP-----PAACGYGNTAYSYGK 55

Query: 262 KHHSSPEKTLPKDNSKTVLI 321
           K HSS E T PK  SK  L+
Sbjct: 56  KPHSSSENT-PKYGSKKALL 74


>ref|XP_003519245.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
           [Glycine max]
          Length = 421

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 43/80 (53%), Positives = 45/80 (56%)
 Frame = +1

Query: 82  MDMKVARRTERVGGTTCVYWLAGRCNRNPCRFLHRETPFPSXXXXXXXXXXXXXXXXXXX 261
           MD K ARRTER+G TTC YW AGRCNRNPCRFLH ETP P                    
Sbjct: 1   MDTKFARRTERIGRTTCSYWRAGRCNRNPCRFLHIETPSP-----PAACGYGNTAYSYGK 55

Query: 262 KHHSSPEKTLPKDNSKTVLI 321
           K HSS E T PK  SK  L+
Sbjct: 56  KPHSSSENT-PKYGSKKALL 74


>ref|XP_003546495.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
           [Glycine max]
          Length = 421

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/80 (52%), Positives = 45/80 (56%)
 Frame = +1

Query: 82  MDMKVARRTERVGGTTCVYWLAGRCNRNPCRFLHRETPFPSXXXXXXXXXXXXXXXXXXX 261
           MD K ARRTER+G TTC YW AGRCN+NPCRFLH ETP P                    
Sbjct: 1   MDTKFARRTERIGRTTCSYWRAGRCNKNPCRFLHIETPSP-----PAACGYGNTAYSYGK 55

Query: 262 KHHSSPEKTLPKDNSKTVLI 321
           K HSS E T PK  SK  L+
Sbjct: 56  KPHSSSENT-PKYGSKKALL 74


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