BLASTX nr result

ID: Glycyrrhiza24_contig00027632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027632
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241070.1| uncharacterized protein LOC100788634 [Glycin...   219   2e-55
ref|XP_003526753.1| PREDICTED: uncharacterized protein LOC100799...   218   3e-55
ref|XP_003602355.1| RNA-binding protein 24-B [Medicago truncatul...   215   3e-54
ref|XP_003529876.1| PREDICTED: uncharacterized protein LOC100786...   155   2e-36
ref|XP_002515069.1| RNA-binding region-containing protein, putat...   155   4e-36

>ref|NP_001241070.1| uncharacterized protein LOC100788634 [Glycine max]
           gi|255635629|gb|ACU18164.1| unknown [Glycine max]
          Length = 253

 Score =  219 bits (558), Expect = 2e-55
 Identities = 102/120 (85%), Positives = 106/120 (88%)
 Frame = +3

Query: 3   WETKRDTLKRYFDQFGEILEAVVITDRNTGRSKGYGFVIFKDPNSAILACQNPYPVIDGR 182
           W TKRDTLKRYFDQFGEILEAVVITD+ TGRSKGYGFV F+DPNSAI AC NPYPVIDGR
Sbjct: 33  WGTKRDTLKRYFDQFGEILEAVVITDKITGRSKGYGFVTFRDPNSAIRACHNPYPVIDGR 92

Query: 183 RANCNLAALGAQKPDPSITGRQKFNSPSWNTVPIQFQGSSTYYNQHIPQYTFPYPPYRYP 362
           RANCNLAALGAQK DPSITGRQK +SPSWN  PI  QG+STYYNQHIP Y FPYP YRYP
Sbjct: 93  RANCNLAALGAQKFDPSITGRQKLSSPSWNMAPIPLQGTSTYYNQHIPHYPFPYPAYRYP 152


>ref|XP_003526753.1| PREDICTED: uncharacterized protein LOC100799072 [Glycine max]
          Length = 246

 Score =  218 bits (556), Expect = 3e-55
 Identities = 104/121 (85%), Positives = 109/121 (90%), Gaps = 1/121 (0%)
 Frame = +3

Query: 3   WETKRDTLKRYFDQFGEILEAVVITDRNTGRSKGYGFVIFKDPNSAILACQNPYPVIDGR 182
           WETKRDTLKRYFDQFGEILEAVVITDR TGRSKGYGFVIF+DPNSAI AC NPYPVIDGR
Sbjct: 25  WETKRDTLKRYFDQFGEILEAVVITDRITGRSKGYGFVIFRDPNSAIRACHNPYPVIDGR 84

Query: 183 RANCNLAALGAQKPDPSI-TGRQKFNSPSWNTVPIQFQGSSTYYNQHIPQYTFPYPPYRY 359
           RANCNLAALGAQK DPSI TGRQKF+SPSWN  PI  QG+ST+YNQHIP Y FP+P YRY
Sbjct: 85  RANCNLAALGAQKFDPSITTGRQKFSSPSWNMAPIPLQGTSTHYNQHIPHYPFPHPVYRY 144

Query: 360 P 362
           P
Sbjct: 145 P 145


>ref|XP_003602355.1| RNA-binding protein 24-B [Medicago truncatula]
           gi|355491403|gb|AES72606.1| RNA-binding protein 24-B
           [Medicago truncatula]
          Length = 250

 Score =  215 bits (547), Expect = 3e-54
 Identities = 102/120 (85%), Positives = 107/120 (89%)
 Frame = +3

Query: 3   WETKRDTLKRYFDQFGEILEAVVITDRNTGRSKGYGFVIFKDPNSAILACQNPYPVIDGR 182
           WETKRDTLKRYFDQFG+ILEAVVITDR TG+SKGYGFV FKDPNSAILACQNP P+IDGR
Sbjct: 35  WETKRDTLKRYFDQFGDILEAVVITDRTTGKSKGYGFVTFKDPNSAILACQNPNPMIDGR 94

Query: 183 RANCNLAALGAQKPDPSITGRQKFNSPSWNTVPIQFQGSSTYYNQHIPQYTFPYPPYRYP 362
           RANCNLA    QKPDPS+TG+QKFNSPS NT PIQ QGSS YYNQHIPQY FPYP YRYP
Sbjct: 95  RANCNLA---YQKPDPSLTGKQKFNSPSRNTSPIQVQGSSAYYNQHIPQYAFPYPLYRYP 151


>ref|XP_003529876.1| PREDICTED: uncharacterized protein LOC100786208 [Glycine max]
          Length = 296

 Score =  155 bits (393), Expect = 2e-36
 Identities = 79/123 (64%), Positives = 91/123 (73%), Gaps = 4/123 (3%)
 Frame = +3

Query: 3   WETKRDTLKRYFDQFGEILEAVVITDRNTGRSKGYGFVIFKDPNSAILACQNPYPVIDGR 182
           WET+RDT++RYF+QFGEILEAVVITD+NTGRSKGYGFV FKDP SA+ ACQNP PVIDGR
Sbjct: 33  WETQRDTMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPESAMRACQNPSPVIDGR 92

Query: 183 RANCNLAALGAQKPDPSI--TGRQKFNSPSW--NTVPIQFQGSSTYYNQHIPQYTFPYPP 350
           RANCNLA+LGA K  P     G  +F  P     + P     SST+++Q   QYTFPY  
Sbjct: 93  RANCNLASLGASKNRPPTFQHGAGRFRPPPGLVASPPAYHGSSSTFFHQPPRQYTFPYSA 152

Query: 351 YRY 359
           YRY
Sbjct: 153 YRY 155


>ref|XP_002515069.1| RNA-binding region-containing protein, putative [Ricinus communis]
           gi|223545549|gb|EEF47053.1| RNA-binding
           region-containing protein, putative [Ricinus communis]
          Length = 291

 Score =  155 bits (391), Expect = 4e-36
 Identities = 78/122 (63%), Positives = 89/122 (72%), Gaps = 3/122 (2%)
 Frame = +3

Query: 3   WETKRDTLKRYFDQFGEILEAVVITDRNTGRSKGYGFVIFKDPNSAILACQNPYPVIDGR 182
           WET+RDT++RYF+QFGEILEAVVITD+NTGRSKGYGFV FKDP +AI ACQNP PVIDGR
Sbjct: 33  WETQRDTMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPEAAIRACQNPSPVIDGR 92

Query: 183 RANCNLAALGAQK---PDPSITGRQKFNSPSWNTVPIQFQGSSTYYNQHIPQYTFPYPPY 353
           RANCNLA+LGA K   P P   G +   +P     P     SS+Y +Q   QYTFPY  Y
Sbjct: 93  RANCNLASLGAHKTRSPTPQHGGGRFRPAPGVVAPPAYHGSSSSYVHQPTGQYTFPYSAY 152

Query: 354 RY 359
            Y
Sbjct: 153 GY 154


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