BLASTX nr result

ID: Glycyrrhiza24_contig00027608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027608
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594308.1| Sister chromatid cohesion protein PDS5-like ...   183   1e-44
ref|XP_003534746.1| PREDICTED: sister chromatid cohesion protein...   179   3e-43
ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein...   178   4e-43
ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein...   178   4e-43
ref|XP_003547294.1| PREDICTED: sister chromatid cohesion protein...   176   1e-42

>ref|XP_003594308.1| Sister chromatid cohesion protein PDS5-like protein [Medicago
           truncatula] gi|124359430|gb|ABN05881.1| HEAT [Medicago
           truncatula] gi|355483356|gb|AES64559.1| Sister chromatid
           cohesion protein PDS5-like protein [Medicago truncatula]
          Length = 1683

 Score =  183 bits (465), Expect = 1e-44
 Identities = 89/111 (80%), Positives = 100/111 (90%)
 Frame = +2

Query: 26  MAKKPHLQLKELGSKLDTLPSSTDALIKLLQQAAACLTDLDQSPSASALESMKPFFNAIV 205
           M +KPHLQLK+LGSKL  +PSS + LI++L+QAA CLTD+DQSPSASALESMKPF NAIV
Sbjct: 1   MGQKPHLQLKDLGSKLQIIPSSIEVLIQILKQAATCLTDMDQSPSASALESMKPFLNAIV 60

Query: 206 KPELLKHQDRDVTLLIATCTCEITRITAPEAPYSDEILKDTFQLIVSTFSG 358
           K ELLKHQDRDV LL+ATC CEITRITAPEAPYSD++LKD FQLIVSTFSG
Sbjct: 61  KSELLKHQDRDVKLLVATCVCEITRITAPEAPYSDDVLKDIFQLIVSTFSG 111


>ref|XP_003534746.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
           [Glycine max]
          Length = 1648

 Score =  179 bits (453), Expect = 3e-43
 Identities = 87/111 (78%), Positives = 101/111 (90%)
 Frame = +2

Query: 26  MAKKPHLQLKELGSKLDTLPSSTDALIKLLQQAAACLTDLDQSPSASALESMKPFFNAIV 205
           MA+KPHLQL+ELGSKL++LPS  +AL +LL+QAA+CLTDLDQSPSAS LESMKPFF+AIV
Sbjct: 1   MAQKPHLQLEELGSKLESLPSDDNALTELLKQAASCLTDLDQSPSASTLESMKPFFSAIV 60

Query: 206 KPELLKHQDRDVTLLIATCTCEITRITAPEAPYSDEILKDTFQLIVSTFSG 358
            PELL+HQD DV LL+ATC CEITRITAPEAPYSD++LK+ FQLIV TFSG
Sbjct: 61  TPELLEHQDSDVKLLVATCVCEITRITAPEAPYSDDVLKNIFQLIVGTFSG 111


>ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
           [Glycine max]
          Length = 1642

 Score =  178 bits (452), Expect = 4e-43
 Identities = 88/106 (83%), Positives = 93/106 (87%)
 Frame = +2

Query: 41  HLQLKELGSKLDTLPSSTDALIKLLQQAAACLTDLDQSPSASALESMKPFFNAIVKPELL 220
           HLQLKELGSKL TLP+S DAL+KLL+QA  CL +LDQSP  S LESMKPFFNAIVKPELL
Sbjct: 3   HLQLKELGSKLQTLPTSKDALVKLLKQATTCLAELDQSPLTSTLESMKPFFNAIVKPELL 62

Query: 221 KHQDRDVTLLIATCTCEITRITAPEAPYSDEILKDTFQLIVSTFSG 358
           KHQDRDV LL+ATC CEITRITAPEAPYSDEILKD FQLIV TF G
Sbjct: 63  KHQDRDVKLLVATCACEITRITAPEAPYSDEILKDIFQLIVGTFRG 108


>ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
           [Glycine max]
          Length = 1641

 Score =  178 bits (452), Expect = 4e-43
 Identities = 88/105 (83%), Positives = 94/105 (89%)
 Frame = +2

Query: 44  LQLKELGSKLDTLPSSTDALIKLLQQAAACLTDLDQSPSASALESMKPFFNAIVKPELLK 223
           LQLKELGSKL+TLP+S DAL+KLL+QA  CL +LDQSPS S LESMKPFFNAIVKPELLK
Sbjct: 4   LQLKELGSKLETLPTSKDALVKLLKQATTCLAELDQSPSTSTLESMKPFFNAIVKPELLK 63

Query: 224 HQDRDVTLLIATCTCEITRITAPEAPYSDEILKDTFQLIVSTFSG 358
           HQDRDV LL+ATC CEITRITAPEAPYSDEILKD FQLIV TF G
Sbjct: 64  HQDRDVKLLVATCVCEITRITAPEAPYSDEILKDIFQLIVGTFRG 108


>ref|XP_003547294.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
           [Glycine max]
          Length = 1656

 Score =  176 bits (447), Expect = 1e-42
 Identities = 86/111 (77%), Positives = 97/111 (87%)
 Frame = +2

Query: 26  MAKKPHLQLKELGSKLDTLPSSTDALIKLLQQAAACLTDLDQSPSASALESMKPFFNAIV 205
           MA+KPH QL+ELGSKL ++PS  + L +LL+QAAACLTDLDQS SAS LESMKPFF AIV
Sbjct: 1   MAQKPHFQLEELGSKLQSIPSDDNVLSELLKQAAACLTDLDQSQSASTLESMKPFFGAIV 60

Query: 206 KPELLKHQDRDVTLLIATCTCEITRITAPEAPYSDEILKDTFQLIVSTFSG 358
           KPELLKHQD D+ LL+ATC CEITRITAPEAPYSD++LKD FQLIV TFSG
Sbjct: 61  KPELLKHQDSDIKLLVATCLCEITRITAPEAPYSDDVLKDIFQLIVGTFSG 111


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