BLASTX nr result

ID: Glycyrrhiza24_contig00027595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027595
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556932.1| PREDICTED: putative SWI/SNF-related matrix-a...   157   8e-37
ref|NP_199166.1| Helicase protein with RING/U-box domain [Arabid...   133   2e-29
ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis ...   133   2e-29
ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-a...   131   5e-29
emb|CBI23583.3| unnamed protein product [Vitis vinifera]              127   9e-28

>ref|XP_003556932.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 3-like
            [Glycine max]
          Length = 1072

 Score =  157 bits (397), Expect = 8e-37
 Identities = 76/95 (80%), Positives = 84/95 (88%)
 Frame = -3

Query: 330  MIECEQSESERDFYDALFMRSKVQFDQYVAQGKVLHHYANILDLLMQLRRCCNHPFLVMC 151
            +IECEQSESERDFY+ALF RSKVQFDQYVAQGKVLHHYANILDLLMQLRRCCNHPFLVMC
Sbjct: 724  LIECEQSESERDFYEALFERSKVQFDQYVAQGKVLHHYANILDLLMQLRRCCNHPFLVMC 783

Query: 150  GSNPQKYADLSRLARRFLQSNTESSELCVLSDSQQ 46
            GS+ QK ADLSRLAR+F Q+NTE  +    +D +Q
Sbjct: 784  GSDTQKRADLSRLARKFFQTNTEFPDESNQNDPRQ 818


>ref|NP_199166.1| Helicase protein with RING/U-box domain [Arabidopsis thaliana]
            gi|60390960|sp|Q9FIY7.1|SM3L3_ARATH RecName:
            Full=Putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 3; Short=SMARCA3-like protein 3
            gi|10178192|dbj|BAB11616.1| DNA repair protein-like
            [Arabidopsis thaliana] gi|332007595|gb|AED94978.1|
            Helicase protein with RING/U-box domain [Arabidopsis
            thaliana]
          Length = 1277

 Score =  133 bits (334), Expect = 2e-29
 Identities = 62/84 (73%), Positives = 75/84 (89%)
 Frame = -3

Query: 330  MIECEQSESERDFYDALFMRSKVQFDQYVAQGKVLHHYANILDLLMQLRRCCNHPFLVMC 151
            +IECEQSE+ERDFY ALF RSKVQFDQ+VAQGKVLH+YANIL+LL++LR+CCNHPFLVM 
Sbjct: 931  VIECEQSEAERDFYTALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVMS 990

Query: 150  GSNPQKYADLSRLARRFLQSNTES 79
             ++ Q+YADL  LARRFL +N +S
Sbjct: 991  RADSQQYADLDSLARRFLDNNPDS 1014


>ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297311253|gb|EFH41677.1| SNF2 domain-containing
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1305

 Score =  133 bits (334), Expect = 2e-29
 Identities = 62/84 (73%), Positives = 75/84 (89%)
 Frame = -3

Query: 330  MIECEQSESERDFYDALFMRSKVQFDQYVAQGKVLHHYANILDLLMQLRRCCNHPFLVMC 151
            +IECEQSE+ERDFY ALF RSKVQFDQ+VAQGKVLH+YANIL+LL++LR+CCNHPFLVM 
Sbjct: 959  VIECEQSEAERDFYTALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVMS 1018

Query: 150  GSNPQKYADLSRLARRFLQSNTES 79
             ++ Q+YADL  LARRFL +N +S
Sbjct: 1019 RADSQQYADLDSLARRFLDNNPDS 1042


>ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 3-like
            [Cucumis sativus] gi|449523563|ref|XP_004168793.1|
            PREDICTED: putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 3-like [Cucumis sativus]
          Length = 1113

 Score =  131 bits (330), Expect = 5e-29
 Identities = 59/86 (68%), Positives = 77/86 (89%)
 Frame = -3

Query: 327  IECEQSESERDFYDALFMRSKVQFDQYVAQGKVLHHYANILDLLMQLRRCCNHPFLVMCG 148
            + CEQSE+E DFYDALF +SKVQFDQ+VAQGKVLH+YANIL+LL++LR+CCNHPFLVM  
Sbjct: 766  VMCEQSEAEHDFYDALFKKSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVMSR 825

Query: 147  SNPQKYADLSRLARRFLQSNTESSEL 70
             + Q+YA+L++LAR+FL+SNT S+ +
Sbjct: 826  GDSQQYANLNKLARKFLESNTNSTTM 851


>emb|CBI23583.3| unnamed protein product [Vitis vinifera]
          Length = 1287

 Score =  127 bits (319), Expect = 9e-28
 Identities = 57/81 (70%), Positives = 74/81 (91%)
 Frame = -3

Query: 330  MIECEQSESERDFYDALFMRSKVQFDQYVAQGKVLHHYANILDLLMQLRRCCNHPFLVMC 151
            +IECEQSE+E DFYDALF RSKV+FDQ+V QG+VLH+YA+IL+LL++LR+CCNHPFLVM 
Sbjct: 845  VIECEQSEAEHDFYDALFKRSKVRFDQFVEQGRVLHNYASILELLLRLRQCCNHPFLVMS 904

Query: 150  GSNPQKYADLSRLARRFLQSN 88
              + Q+YADLS+LAR+FL++N
Sbjct: 905  RGDTQQYADLSKLARKFLENN 925


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