BLASTX nr result

ID: Glycyrrhiza24_contig00027593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027593
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539004.1| PREDICTED: uncharacterized protein LOC100789...    88   8e-16
ref|XP_003615396.1| hypothetical protein MTR_5g067430 [Medicago ...    70   1e-10
ref|XP_002522432.1| conserved hypothetical protein [Ricinus comm...    65   6e-09
ref|XP_004166522.1| PREDICTED: TATA box-binding protein-associat...    62   6e-08
ref|XP_004152882.1| PREDICTED: TATA box-binding protein-associat...    62   6e-08

>ref|XP_003539004.1| PREDICTED: uncharacterized protein LOC100789168 [Glycine max]
          Length = 719

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 48/87 (55%), Positives = 55/87 (63%)
 Frame = +2

Query: 2   EKMGRQCVNEPSPEDGTCLTDDVXXXXXXXXXXXXXXXGEDLDSHEHGSGKAVVKEAIRQ 181
           EK+ ++  NE  P+D T L D                  ED DS EH SGK+ VKEAIRQ
Sbjct: 549 EKIRKKGFNELFPDDDTSLED-----VSNNNSHESLSDSEDSDSQEHSSGKSHVKEAIRQ 603

Query: 182 MKLDMEENRFCYIPPSVKLKRLDYLHY 262
           MKL+MEENRF YIPPSVK KRLDY+HY
Sbjct: 604 MKLEMEENRFYYIPPSVKRKRLDYIHY 630


>ref|XP_003615396.1| hypothetical protein MTR_5g067430 [Medicago truncatula]
           gi|355516731|gb|AES98354.1| hypothetical protein
           MTR_5g067430 [Medicago truncatula]
          Length = 734

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/50 (70%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
 Frame = +2

Query: 116 GEDLDSHEHG-SGKAVVKEAIRQMKLDMEENRFCYIPPSVKLKRLDYLHY 262
           GED   +++G SGKAVV EAI QMKLDMEEN FCY+PP VK K LDY+HY
Sbjct: 569 GEDSVFNKNGGSGKAVVDEAITQMKLDMEENLFCYVPPRVKPKNLDYVHY 618


>ref|XP_002522432.1| conserved hypothetical protein [Ricinus communis]
           gi|223538317|gb|EEF39924.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 751

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/48 (60%), Positives = 36/48 (75%)
 Frame = +2

Query: 119 EDLDSHEHGSGKAVVKEAIRQMKLDMEENRFCYIPPSVKLKRLDYLHY 262
           ++++  E  S K +   AIR++KLDMEENRFCYIPP V LKR DYLHY
Sbjct: 615 QNVEHKEKDSEKTLEGRAIRRLKLDMEENRFCYIPPRVNLKRFDYLHY 662


>ref|XP_004166522.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B-like [Cucumis sativus]
          Length = 735

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = +2

Query: 161 VKEAIRQMKLDMEENRFCYIPPSVKLKRLDYLHYS 265
           + EAIRQ+KLDMEE RFCYIPP +  KR DYLHYS
Sbjct: 616 INEAIRQLKLDMEEKRFCYIPPRINPKRFDYLHYS 650


>ref|XP_004152882.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B-like [Cucumis sativus]
          Length = 735

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = +2

Query: 161 VKEAIRQMKLDMEENRFCYIPPSVKLKRLDYLHYS 265
           + EAIRQ+KLDMEE RFCYIPP +  KR DYLHYS
Sbjct: 616 INEAIRQLKLDMEEKRFCYIPPRINPKRFDYLHYS 650


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