BLASTX nr result

ID: Glycyrrhiza24_contig00027583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027583
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase...   187   1e-45
ref|XP_003537422.1| PREDICTED: uncharacterized ATP-dependent hel...   176   1e-42
ref|XP_003616118.1| DNA-binding protein SMUBP-2 [Medicago trunca...   149   2e-34
ref|XP_003616121.1| DNA-binding protein SMUBP-2 [Medicago trunca...   145   4e-33
ref|XP_003616131.1| Regulator of nonsense transcripts-like prote...   132   3e-29

>ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase A [Medicago
           truncatula] gi|355489654|gb|AES70857.1| DNA polymerase
           alpha-associated DNA helicase A [Medicago truncatula]
          Length = 950

 Score =  187 bits (474), Expect = 1e-45
 Identities = 101/166 (60%), Positives = 119/166 (71%), Gaps = 17/166 (10%)
 Frame = +2

Query: 2   DDPLTLEQFVKKKYTYIEEKYLSYKDNRKESVMTLEQFVKQRFGFIGEKLKEYMQTLYTH 181
           DDPLTL QFVKK+Y        SYK+++K S+MT EQFVK RF  I  +LK   +TLYTH
Sbjct: 441 DDPLTLAQFVKKEYH-------SYKEDKKNSIMTFEQFVKMRFSSIVAELKLCKKTLYTH 493

Query: 182 LPTSFIPFEEMKKMLVVLDLLRSIESSLCKAKLKQALDD-----------------GEEC 310
           LPTS  PFEEMKK+ + LDLL S+ESS+CKAKLKQ LDD                  E+C
Sbjct: 494 LPTSLFPFEEMKKIPIALDLLTSLESSMCKAKLKQTLDDHGDGESIFDCLGRLNNTTEDC 553

Query: 311 LILLRSLLQTISLPNLTERYGIEKLCLMNASLIFCTAASSTKLFTE 448
           + LLRSLL+ ISLPN+TE+Y IEK CLMNASLIFCTA+SST+LFTE
Sbjct: 554 VCLLRSLLKKISLPNITEKYEIEKFCLMNASLIFCTASSSTRLFTE 599


>ref|XP_003537422.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
           [Glycine max]
          Length = 925

 Score =  176 bits (447), Expect = 1e-42
 Identities = 95/166 (57%), Positives = 120/166 (72%), Gaps = 17/166 (10%)
 Frame = +2

Query: 2   DDPLTLEQFVKKKYTYIEEKYLSYKDNRKESVMTLEQFVKQRFGFIGEKLKEYMQTLYTH 181
           DD LTLEQF+KK+ T IEE+YL YKD++++++ T+EQ+  QR     E+L+EYM+TL+TH
Sbjct: 422 DDHLTLEQFLKKESTCIEEQYLLYKDHKRKNIKTMEQYFMQRLRSNREQLEEYMRTLHTH 481

Query: 182 LPTSFIPFEEMKKMLVVLDLLRSIESSLCKAKLKQALD---DG--------------EEC 310
           LPTS IP EE+KKM V LDLL S+E+SL K K KQ  D   DG              EEC
Sbjct: 482 LPTSLIPLEEIKKMPVALDLLSSLENSLSKDKFKQTSDGCEDGESILDCLGRLSIKNEEC 541

Query: 311 LILLRSLLQTISLPNLTERYGIEKLCLMNASLIFCTAASSTKLFTE 448
           L+ LRSL QTISLPN+T++Y + K CLM+A LIFCTAASSTKLF +
Sbjct: 542 LVKLRSLSQTISLPNITDKYEMAKFCLMSARLIFCTAASSTKLFAD 587


>ref|XP_003616118.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
           gi|355517453|gb|AES99076.1| DNA-binding protein SMUBP-2
           [Medicago truncatula]
          Length = 950

 Score =  149 bits (377), Expect = 2e-34
 Identities = 80/150 (53%), Positives = 107/150 (71%), Gaps = 1/150 (0%)
 Frame = +2

Query: 2   DDPLTLEQFVKKKYTYIEEKYLSYKDNRKESV-MTLEQFVKQRFGFIGEKLKEYMQTLYT 178
           D P+TLE+FVKKKY YI E+Y  YKD++K S+ M++EQF++QRF FIG KLK +M+TL T
Sbjct: 488 DCPMTLEEFVKKKYDYIIEQYDMYKDDKKLSIGMSMEQFLRQRFCFIGGKLKLFMKTLCT 547

Query: 179 HLPTSFIPFEEMKKMLVVLDLLRSIESSLCKAKLKQALDDGEECLILLRSLLQTISLPNL 358
           HLPT F+P +  KK+  VL+LL+S+E        K+AL + EE L  L  L +TI LP +
Sbjct: 548 HLPTCFLPIKVAKKVFRVLELLKSLE--------KEALHEKEELLHTLCFLSETIKLPKV 599

Query: 359 TERYGIEKLCLMNASLIFCTAASSTKLFTE 448
           T +YGI + CL NA L+ CTA+S  KLF+E
Sbjct: 600 TSKYGISQFCLKNACLLLCTASSCVKLFSE 629


>ref|XP_003616121.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
           gi|355517456|gb|AES99079.1| DNA-binding protein SMUBP-2
           [Medicago truncatula]
          Length = 978

 Score =  145 bits (365), Expect = 4e-33
 Identities = 83/165 (50%), Positives = 109/165 (66%), Gaps = 19/165 (11%)
 Frame = +2

Query: 11  LTLEQFVKKKYTYIEEKYLSYKDNRKESV-MTLEQFVKQRFGFIGEKLKEYMQTLYTHLP 187
           LTLE+FVKKKY YI E+Y  Y+D++K SV M++EQF KQ+F   G KLK  M+TL THLP
Sbjct: 428 LTLEEFVKKKYGYIVEQYDIYQDDKKVSVGMSMEQFFKQKFCCFGGKLKSLMKTLCTHLP 487

Query: 188 TSFIPFEEMKKMLVVLDLLRSIESSLCKAKLKQALDD------------------GEECL 313
           TSF+  +   K+  VL+LL+S+E SL ++K KQ+L+D                   EE L
Sbjct: 488 TSFVSLKVAMKIFRVLELLKSLEVSLSQSKQKQSLNDHFGVGQRIFSWFGWLSFEKEEFL 547

Query: 314 ILLRSLLQTISLPNLTERYGIEKLCLMNASLIFCTAASSTKLFTE 448
             L  L +TI LP LT +YGI + CL NA L+FCTA+SS+KL+TE
Sbjct: 548 HTLCFLCETIKLPKLTSKYGISQFCLKNACLLFCTASSSSKLYTE 592


>ref|XP_003616131.1| Regulator of nonsense transcripts-like protein [Medicago
           truncatula] gi|355517466|gb|AES99089.1| Regulator of
           nonsense transcripts-like protein [Medicago truncatula]
          Length = 950

 Score =  132 bits (332), Expect = 3e-29
 Identities = 81/165 (49%), Positives = 101/165 (61%), Gaps = 16/165 (9%)
 Frame = +2

Query: 2   DDPLTLEQFVKKKYTYIEEKYLSYKDNRKESVMTLEQFVKQRFGFIGEKLKEYMQTLYTH 181
           DD +TLE++V+K +  I E+Y S + ++ E+ MT EQFVK+RF  + EKLK  +QTLYTH
Sbjct: 434 DDTMTLEEYVQKLWKEIAEEYRSDEIDKVENFMTFEQFVKKRFRELSEKLKFLIQTLYTH 493

Query: 182 LPTSFIPFEEMKKMLVVLDLLRSIESSLCKAKLKQALDDGE----------------ECL 313
           LP SFI    +KKM   L+LLRSI  SL +AK K+ LDD E                E L
Sbjct: 494 LPKSFISLATVKKMFRGLELLRSIGVSLHQAKFKKTLDDCEKENIPACFEPSNFEIDEFL 553

Query: 314 ILLRSLLQTISLPNLTERYGIEKLCLMNASLIFCTAASSTKLFTE 448
            LL  L  +I LP L  R  IEK CL NA LI CT +SS KL+TE
Sbjct: 554 RLLSLLSNSILLPELNGRGHIEKFCLSNACLILCTVSSSIKLYTE 598


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