BLASTX nr result
ID: Glycyrrhiza24_contig00027576
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00027576
(362 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containi... 191 5e-47
ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containi... 190 1e-46
ref|XP_002303960.1| predicted protein [Populus trichocarpa] gi|2... 178 5e-43
ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containi... 174 9e-42
ref|XP_002525566.1| pentatricopeptide repeat-containing protein,... 168 5e-40
>ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 191 bits (485), Expect = 5e-47
Identities = 97/120 (80%), Positives = 105/120 (87%)
Frame = -3
Query: 360 KLDFEVPVMNSLISMYSKCKRVDVAASIFDGLKERKTTVTWNAMILGYAQNGFVHEALDL 181
K+ F+V VMNSLISMYSKCKRVD+AAS+F LK KT VTWNAMILGYAQNG V+EAL+L
Sbjct: 374 KIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKH-KTVVTWNAMILGYAQNGCVNEALNL 432
Query: 180 FCMMQSQDIKPDCFTLVGVITALADLSVTRQAKWIHGLAIRTFMDKNVFVATALVDMYAK 1
FC MQS DIKPD FTLV VITALADLSVTRQAKWIHGLAIRT MDKNVFV TAL+D +AK
Sbjct: 433 FCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAK 492
Score = 92.4 bits (228), Expect = 3e-17
Identities = 45/112 (40%), Positives = 70/112 (62%)
Frame = -3
Query: 336 MNSLISMYSKCKRVDVAASIFDGLKERKTTVTWNAMILGYAQNGFVHEALDLFCMMQSQD 157
M +++++Y+KC++++ A +F+ + +R V+WN ++ GYAQNGF A+ + MQ
Sbjct: 180 MTAVVNLYAKCRQIEDAYKMFERMPQRDL-VSWNTVVAGYAQNGFARRAVQVVLQMQEAG 238
Query: 156 IKPDCFTLVGVITALADLSVTRQAKWIHGLAIRTFMDKNVFVATALVDMYAK 1
KPD TLV V+ A+ADL R + IHG A R + V VATA++D Y K
Sbjct: 239 QKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFK 290
Score = 70.5 bits (171), Expect = 1e-10
Identities = 38/118 (32%), Positives = 63/118 (53%)
Frame = -3
Query: 354 DFEVPVMNSLISMYSKCKRVDVAASIFDGLKERKTTVTWNAMILGYAQNGFVHEALDLFC 175
++ V V +++ Y KC V A +F G+ R V+WN MI GYAQNG EA F
Sbjct: 275 EYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNV-VSWNTMIDGYAQNGESEEAFATFL 333
Query: 174 MMQSQDIKPDCFTLVGVITALADLSVTRQAKWIHGLAIRTFMDKNVFVATALVDMYAK 1
M + ++P +++G + A A+L + +++H L + +V V +L+ MY+K
Sbjct: 334 KMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSK 391
Score = 67.8 bits (164), Expect = 9e-10
Identities = 36/93 (38%), Positives = 53/93 (56%)
Frame = -3
Query: 357 LDFEVPVMNSLISMYSKCKRVDVAASIFDGLKERKTTVTWNAMILGYAQNGFVHEALDLF 178
+D V V +LI ++KC + A +FD ++ER +TWNAMI GY NG EALDLF
Sbjct: 476 MDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHV-ITWNAMIDGYGTNGHGREALDLF 534
Query: 177 CMMQSQDIKPDCFTLVGVITALADLSVTRQAKW 79
MQ+ +KP+ T + VI A + + + +
Sbjct: 535 NEMQNGSVKPNEITFLSVIAACSHSGLVEEGMY 567
Score = 58.9 bits (141), Expect = 4e-07
Identities = 31/109 (28%), Positives = 59/109 (54%)
Frame = -3
Query: 327 LISMYSKCKRVDVAASIFDGLKERKTTVTWNAMILGYAQNGFVHEALDLFCMMQSQDIKP 148
LIS++ K + AA +F+ + E K V ++ M+ GYA+N + +A+ + M+ ++ P
Sbjct: 82 LISLFCKFNSITEAARVFEPV-EHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMP 140
Query: 147 DCFTLVGVITALADLSVTRQAKWIHGLAIRTFMDKNVFVATALVDMYAK 1
+ ++ + R+ + IHG+ I N+F TA+V++YAK
Sbjct: 141 VVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAK 189
>ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 190 bits (482), Expect = 1e-46
Identities = 98/120 (81%), Positives = 104/120 (86%)
Frame = -3
Query: 360 KLDFEVPVMNSLISMYSKCKRVDVAASIFDGLKERKTTVTWNAMILGYAQNGFVHEALDL 181
KLD V VMNSLISMYSKCKRVD+AASIF+ L+ KT VTWNAMILGYAQNG V EAL+L
Sbjct: 377 KLDSNVSVMNSLISMYSKCKRVDIAASIFNNLE--KTNVTWNAMILGYAQNGCVKEALNL 434
Query: 180 FCMMQSQDIKPDCFTLVGVITALADLSVTRQAKWIHGLAIRTFMDKNVFVATALVDMYAK 1
FCMMQSQ IK DCFTLVGVITALAD SV RQAKWIHGLA+R MD NVFV+TALVDMYAK
Sbjct: 435 FCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAK 494
Score = 92.4 bits (228), Expect = 3e-17
Identities = 46/113 (40%), Positives = 69/113 (61%)
Frame = -3
Query: 339 VMNSLISMYSKCKRVDVAASIFDGLKERKTTVTWNAMILGYAQNGFVHEALDLFCMMQSQ 160
VM +++S+Y+KC+++D A +F+ + + K V+W ++ GYAQNG AL L MQ
Sbjct: 182 VMTAVMSLYAKCRQIDNAYKMFERM-QHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEA 240
Query: 159 DIKPDCFTLVGVITALADLSVTRQAKWIHGLAIRTFMDKNVFVATALVDMYAK 1
KPD TLV ++ A+AD+ R + IHG A R+ + V V AL+DMY K
Sbjct: 241 GQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFK 293
Score = 79.0 bits (193), Expect = 4e-13
Identities = 44/115 (38%), Positives = 64/115 (55%)
Frame = -3
Query: 345 VPVMNSLISMYSKCKRVDVAASIFDGLKERKTTVTWNAMILGYAQNGFVHEALDLFCMMQ 166
V V N+L+ MY KC +A +F G++ KT V+WN MI G AQNG EA F M
Sbjct: 281 VNVTNALLDMYFKCGSARIARLVFKGMRS-KTVVSWNTMIDGCAQNGESEEAFATFLKML 339
Query: 165 SQDIKPDCFTLVGVITALADLSVTRQAKWIHGLAIRTFMDKNVFVATALVDMYAK 1
+ P T++GV+ A A+L + ++H L + +D NV V +L+ MY+K
Sbjct: 340 DEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSK 394
Score = 67.0 bits (162), Expect = 1e-09
Identities = 35/81 (43%), Positives = 49/81 (60%)
Frame = -3
Query: 357 LDFEVPVMNSLISMYSKCKRVDVAASIFDGLKERKTTVTWNAMILGYAQNGFVHEALDLF 178
+D V V +L+ MY+KC + A +FD ++ER +TWNAMI GY +G E LDLF
Sbjct: 478 MDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHV-ITWNAMIDGYGTHGVGKETLDLF 536
Query: 177 CMMQSQDIKPDCFTLVGVITA 115
MQ +KP+ T + VI+A
Sbjct: 537 NEMQKGAVKPNDITFLSVISA 557
>ref|XP_002303960.1| predicted protein [Populus trichocarpa] gi|222841392|gb|EEE78939.1|
predicted protein [Populus trichocarpa]
Length = 704
Score = 178 bits (451), Expect = 5e-43
Identities = 90/120 (75%), Positives = 102/120 (85%)
Frame = -3
Query: 360 KLDFEVPVMNSLISMYSKCKRVDVAASIFDGLKERKTTVTWNAMILGYAQNGFVHEALDL 181
KLD +V VMNSLISMYSKCKRVD+AA IF L+ KT V+WNAMILGYAQNG V+EAL+
Sbjct: 262 KLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRN-KTLVSWNAMILGYAQNGCVNEALNA 320
Query: 180 FCMMQSQDIKPDCFTLVGVITALADLSVTRQAKWIHGLAIRTFMDKNVFVATALVDMYAK 1
FC MQS++IKPD FT+V VI ALA+LS+ RQAKWIHGL IR F+DKNVFV TALVDMYAK
Sbjct: 321 FCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAK 380
Score = 93.6 bits (231), Expect = 1e-17
Identities = 47/112 (41%), Positives = 70/112 (62%)
Frame = -3
Query: 336 MNSLISMYSKCKRVDVAASIFDGLKERKTTVTWNAMILGYAQNGFVHEALDLFCMMQSQD 157
M +++MY+KC++++ A ++FD + ER V WN MI GYAQNGF AL L M +
Sbjct: 68 MTGVVNMYAKCRQINDAYNMFDRMPERDL-VCWNTMISGYAQNGFAKVALMLVLRMSEEG 126
Query: 156 IKPDCFTLVGVITALADLSVTRQAKWIHGLAIRTFMDKNVFVATALVDMYAK 1
+PD T+V ++ A+AD + R +HG +R + V V+TALVDMY+K
Sbjct: 127 HRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSK 178
Score = 86.7 bits (213), Expect = 2e-15
Identities = 45/115 (39%), Positives = 69/115 (60%)
Frame = -3
Query: 345 VPVMNSLISMYSKCKRVDVAASIFDGLKERKTTVTWNAMILGYAQNGFVHEALDLFCMMQ 166
V V +L+ MYSKC V +A IFDG+ R T V+WN+MI GY Q+G A+ +F M
Sbjct: 166 VNVSTALVDMYSKCGSVSIARVIFDGMDHR-TVVSWNSMIDGYVQSGDAEGAMLIFQKML 224
Query: 165 SQDIKPDCFTLVGVITALADLSVTRQAKWIHGLAIRTFMDKNVFVATALVDMYAK 1
+ ++P T++G + A ADL + K++H L + +D +V V +L+ MY+K
Sbjct: 225 DEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSK 279
Score = 58.9 bits (141), Expect = 4e-07
Identities = 31/81 (38%), Positives = 47/81 (58%)
Frame = -3
Query: 357 LDFEVPVMNSLISMYSKCKRVDVAASIFDGLKERKTTVTWNAMILGYAQNGFVHEALDLF 178
LD V VM +L+ MY+KC + A +FD + R +TWNAMI GY +G +++LF
Sbjct: 364 LDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHV-ITWNAMIDGYGTHGLGKTSVELF 422
Query: 177 CMMQSQDIKPDCFTLVGVITA 115
M+ IKP+ T + ++A
Sbjct: 423 KEMKKGTIKPNDITFLCALSA 443
>ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 174 bits (440), Expect = 9e-42
Identities = 88/120 (73%), Positives = 101/120 (84%)
Frame = -3
Query: 360 KLDFEVPVMNSLISMYSKCKRVDVAASIFDGLKERKTTVTWNAMILGYAQNGFVHEALDL 181
+L +V VMNSLISMYSKCKRVD+AA IF+ L + KT V+WNAMILGYAQNG ++EA+D
Sbjct: 407 ELGSDVSVMNSLISMYSKCKRVDIAAEIFENL-QHKTLVSWNAMILGYAQNGRINEAIDY 465
Query: 180 FCMMQSQDIKPDCFTLVGVITALADLSVTRQAKWIHGLAIRTFMDKNVFVATALVDMYAK 1
FC MQ Q+IKPD FT+V VI ALA+LSV QAKWIHGL IRT +DKNVFVATALVDMYAK
Sbjct: 466 FCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAK 525
Score = 96.3 bits (238), Expect = 2e-18
Identities = 49/112 (43%), Positives = 72/112 (64%)
Frame = -3
Query: 336 MNSLISMYSKCKRVDVAASIFDGLKERKTTVTWNAMILGYAQNGFVHEALDLFCMMQSQD 157
M +++MY+KC+ V+ A +FD + ER V WN +I GYAQNGF AL+L MQ +
Sbjct: 213 MTGVVNMYAKCRLVEEAYKMFDRMPERDL-VCWNTIISGYAQNGFGKTALELVLRMQEEG 271
Query: 156 IKPDCFTLVGVITALADLSVTRQAKWIHGLAIRTFMDKNVFVATALVDMYAK 1
+PD T+V ++ A+AD+ R + IHG ++R + V V+TALVDMY+K
Sbjct: 272 KRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSK 323
Score = 79.7 bits (195), Expect = 2e-13
Identities = 43/115 (37%), Positives = 66/115 (57%)
Frame = -3
Query: 345 VPVMNSLISMYSKCKRVDVAASIFDGLKERKTTVTWNAMILGYAQNGFVHEALDLFCMMQ 166
V V +L+ MYSKC V A IFD + KT V+WN+MI GY QNG A+++F M
Sbjct: 311 VNVSTALVDMYSKCGSVGTARLIFDRMTG-KTVVSWNSMIDGYVQNGDPGAAMEIFQKMM 369
Query: 165 SQDIKPDCFTLVGVITALADLSVTRQAKWIHGLAIRTFMDKNVFVATALVDMYAK 1
+ ++ T++G + A ADL Q +++H L + + +V V +L+ MY+K
Sbjct: 370 DEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSK 424
Score = 63.5 bits (153), Expect = 2e-08
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = -3
Query: 357 LDFEVPVMNSLISMYSKCKRVDVAASIFDGLKERKTTVTWNAMILGYAQNGFVHEALDLF 178
LD V V +L+ MY+KC V A +FD + ER T TWNAMI GY +G AL+LF
Sbjct: 509 LDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVT-TWNAMIDGYGTHGLGKAALELF 567
Query: 177 CMMQSQDIKPDCFTLVGVITA 115
M+ + IKP+ T + V++A
Sbjct: 568 EKMKKEVIKPNEVTFLCVLSA 588
Score = 58.5 bits (140), Expect = 5e-07
Identities = 32/109 (29%), Positives = 57/109 (52%)
Frame = -3
Query: 327 LISMYSKCKRVDVAASIFDGLKERKTTVTWNAMILGYAQNGFVHEALDLFCMMQSQDIKP 148
L+S++ K + AA +F +++ K ++ M+ GYA+N + +A+ FC M+ ++P
Sbjct: 115 LVSLFCKFGSLHEAARVFQPIED-KIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRP 173
Query: 147 DCFTLVGVITALADLSVTRQAKWIHGLAIRTFMDKNVFVATALVDMYAK 1
+ ++ D + R+ K IH I NVF T +V+MYAK
Sbjct: 174 VVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAK 222
>ref|XP_002525566.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535145|gb|EEF36825.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 563
Score = 168 bits (425), Expect = 5e-40
Identities = 85/120 (70%), Positives = 99/120 (82%)
Frame = -3
Query: 360 KLDFEVPVMNSLISMYSKCKRVDVAASIFDGLKERKTTVTWNAMILGYAQNGFVHEALDL 181
KLD V VMNSLISMYSKCK+VD AA++F+ L+ R T V+WNAMILGYAQNG ++EAL+
Sbjct: 374 KLDSNVSVMNSLISMYSKCKQVDFAANLFENLQNR-TLVSWNAMILGYAQNGRLNEALNF 432
Query: 180 FCMMQSQDIKPDCFTLVGVITALADLSVTRQAKWIHGLAIRTFMDKNVFVATALVDMYAK 1
FC MQSQ+IKPD FT+V VI ALA+LS+ RQAKWIHGL IR +D VFV TALVDMYAK
Sbjct: 433 FCEMQSQNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRLLDDTVFVMTALVDMYAK 492
Score = 86.3 bits (212), Expect = 2e-15
Identities = 47/112 (41%), Positives = 67/112 (59%)
Frame = -3
Query: 336 MNSLISMYSKCKRVDVAASIFDGLKERKTTVTWNAMILGYAQNGFVHEALDLFCMMQSQD 157
M +++S+Y KC+ + A +FD + ER V WN +I GYAQNG AL+L + +
Sbjct: 180 MTAVVSLYCKCRVIGDAYKMFDRMTERDL-VCWNTIISGYAQNGLTKVALELVPKIFEEG 238
Query: 156 IKPDCFTLVGVITALADLSVTRQAKWIHGLAIRTFMDKNVFVATALVDMYAK 1
+PD T+V V+ A+AD+ R K IH IR D V ++TALVDMY+K
Sbjct: 239 HRPDSVTIVSVLPAVADIRSLRFGKAIHAYVIRAGFDWLVNISTALVDMYSK 290
Score = 85.5 bits (210), Expect = 4e-15
Identities = 47/118 (39%), Positives = 67/118 (56%)
Frame = -3
Query: 354 DFEVPVMNSLISMYSKCKRVDVAASIFDGLKERKTTVTWNAMILGYAQNGFVHEALDLFC 175
D+ V + +L+ MYSKC + A IFDG+ R T VTWN+MI G +NG EA LF
Sbjct: 275 DWLVNISTALVDMYSKCDSLGTARVIFDGMGSR-TVVTWNSMIAGCVENGDPEEAKVLFK 333
Query: 174 MMQSQDIKPDCFTLVGVITALADLSVTRQAKWIHGLAIRTFMDKNVFVATALVDMYAK 1
M + ++P T++ V+ A AD Q K++H L +D NV V +L+ MY+K
Sbjct: 334 KMMDEGLQPTDVTVMEVLHACADSGDLEQGKFVHKLVEDLKLDSNVSVMNSLISMYSK 391
Score = 61.6 bits (148), Expect = 6e-08
Identities = 33/81 (40%), Positives = 48/81 (59%)
Frame = -3
Query: 357 LDFEVPVMNSLISMYSKCKRVDVAASIFDGLKERKTTVTWNAMILGYAQNGFVHEALDLF 178
LD V VM +L+ MY+KC + A +F+ + ER +TWN+MI Y +G EA+ LF
Sbjct: 476 LDDTVFVMTALVDMYAKCGAIHTARKLFNMMSERHV-ITWNSMIDAYGTHGLGKEAVQLF 534
Query: 177 CMMQSQDIKPDCFTLVGVITA 115
MQ IKP+ T + V++A
Sbjct: 535 VEMQKGTIKPNDVTFLCVLSA 555
Score = 60.1 bits (144), Expect = 2e-07
Identities = 33/109 (30%), Positives = 57/109 (52%)
Frame = -3
Query: 327 LISMYSKCKRVDVAASIFDGLKERKTTVTWNAMILGYAQNGFVHEALDLFCMMQSQDIKP 148
LIS++ + AA +F+ + E K ++ M+ G+A+N + AL FC M+ +++P
Sbjct: 82 LISLFCNYGSLTEAARVFEPI-ENKLEALYHTMLKGFAKNSSLDSALLFFCRMKHDNVRP 140
Query: 147 DCFTLVGVITALADLSVTRQAKWIHGLAIRTFMDKNVFVATALVDMYAK 1
+ ++T D R+ K IHG I + N+F TA+V +Y K
Sbjct: 141 VVYNFTYLLTLCGDNFDLRRGKEIHGQLITSGFSWNLFAMTAVVSLYCK 189