BLASTX nr result

ID: Glycyrrhiza24_contig00027551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027551
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA08855.1| copper amine oxidase [Cicer arietinum]                165   4e-39
ref|NP_001237211.1| copper amino oxidase precursor [Glycine max]...   162   3e-38
dbj|BAA77206.1| copper amine oxidase [Pisum sativum] gi|22477064...   156   1e-36
pdb|1W2Z|A Chain A, Psao And Xenon gi|56966623|pdb|1W2Z|B Chain ...   151   5e-35
pdb|1KSI|A Chain A, Crystal Structure Of A Eukaryotic (Pea Seedl...   151   5e-35

>emb|CAA08855.1| copper amine oxidase [Cicer arietinum]
          Length = 670

 Score =  165 bits (417), Expect = 4e-39
 Identities = 78/108 (72%), Positives = 94/108 (87%)
 Frame = +2

Query: 2   LDPLTKEEITTVQTVVQSKYPTSKNRVAFHYIGLDDPDKNTVLKWDMKPTIVTVPRQAFA 181
           LDPLTKEE + VQTVV  KYPTSKN VAFHYIGLDDPDK+ VLK++ +PT++T+PR++F 
Sbjct: 31  LDPLTKEEFSIVQTVVLHKYPTSKNSVAFHYIGLDDPDKDDVLKYETQPTLITIPRKSFV 90

Query: 182 AVIINSQIHEIVIDLRAKRILSDNVYKGHGFPILSVEEQGVAIELPLK 325
             IINSQ HEIVIDLR K I+SDN++KG+GFPILS +EQGVAI+LPLK
Sbjct: 91  VAIINSQNHEIVIDLRLKTIVSDNIHKGYGFPILSADEQGVAIKLPLK 138


>ref|NP_001237211.1| copper amino oxidase precursor [Glycine max]
           gi|42820320|emb|CAE47488.1| copper amino oxidase
           [Glycine max]
          Length = 673

 Score =  162 bits (410), Expect = 3e-38
 Identities = 75/109 (68%), Positives = 99/109 (90%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   LDPLTKEEITTVQTVVQSKYPTSKNRVAFHYIGLDDPDKNTVLKWD-MKPTIVTVPRQAF 178
           LDPLTK+EI+ VQT+VQ+KYP+S NR++FHYIGLD+P+K+ +LKW+ +KPT++TVPR+A 
Sbjct: 34  LDPLTKQEISLVQTIVQNKYPSSSNRLSFHYIGLDEPEKDAILKWESIKPTVITVPRKAL 93

Query: 179 AAVIINSQIHEIVIDLRAKRILSDNVYKGHGFPILSVEEQGVAIELPLK 325
           A VIINSQ HEI+IDL+A+RI+SDN++ G+GFP LSV+EQ VAIELPLK
Sbjct: 94  AIVIINSQTHEILIDLKARRIVSDNIHSGNGFPTLSVDEQVVAIELPLK 142


>dbj|BAA77206.1| copper amine oxidase [Pisum sativum] gi|224770641|dbj|BAH28262.1|
           diamine oxidase [Pisum sativum]
          Length = 674

 Score =  156 bits (395), Expect = 1e-36
 Identities = 71/108 (65%), Positives = 93/108 (86%)
 Frame = +2

Query: 2   LDPLTKEEITTVQTVVQSKYPTSKNRVAFHYIGLDDPDKNTVLKWDMKPTIVTVPRQAFA 181
           LDPLTKEE   VQT+VQ+KYP SKN++AFHYIGLDDP+K+ VL+++  PT+V++PR++F 
Sbjct: 35  LDPLTKEEFLAVQTIVQNKYPISKNKLAFHYIGLDDPEKDHVLRYETHPTLVSIPRKSFV 94

Query: 182 AVIINSQIHEIVIDLRAKRILSDNVYKGHGFPILSVEEQGVAIELPLK 325
             IINSQ HEI+IDLR + I+SDN++ G+GFPILSV+EQ +AIELPLK
Sbjct: 95  VAIINSQTHEILIDLRIRSIVSDNIHNGYGFPILSVDEQSLAIELPLK 142


>pdb|1W2Z|A Chain A, Psao And Xenon gi|56966623|pdb|1W2Z|B Chain B, Psao And
           Xenon gi|56966624|pdb|1W2Z|C Chain C, Psao And Xenon
           gi|56966625|pdb|1W2Z|D Chain D, Psao And Xenon
          Length = 649

 Score =  151 bits (382), Expect = 5e-35
 Identities = 69/108 (63%), Positives = 91/108 (84%)
 Frame = +2

Query: 2   LDPLTKEEITTVQTVVQSKYPTSKNRVAFHYIGLDDPDKNTVLKWDMKPTIVTVPRQAFA 181
           LDPLTKEE   VQT+VQ+KYP S NR+AFHYIGLDDP+K+ VL+++  PT+V++PR+ F 
Sbjct: 10  LDPLTKEEFLAVQTIVQNKYPISNNRLAFHYIGLDDPEKDHVLRYETHPTLVSIPRKIFV 69

Query: 182 AVIINSQIHEIVIDLRAKRILSDNVYKGHGFPILSVEEQGVAIELPLK 325
             IINSQ HEI+I+LR + I+SDN++ G+GFPILSV+EQ +AI+LPLK
Sbjct: 70  VAIINSQTHEILINLRIRSIVSDNIHNGYGFPILSVDEQSLAIKLPLK 117


>pdb|1KSI|A Chain A, Crystal Structure Of A Eukaryotic (Pea Seedling)
           Copper-Containing Amine Oxidase At 2.2a Resolution
           gi|2780997|pdb|1KSI|B Chain B, Crystal Structure Of A
           Eukaryotic (Pea Seedling) Copper-Containing Amine
           Oxidase At 2.2a Resolution
          Length = 642

 Score =  151 bits (382), Expect = 5e-35
 Identities = 69/108 (63%), Positives = 91/108 (84%)
 Frame = +2

Query: 2   LDPLTKEEITTVQTVVQSKYPTSKNRVAFHYIGLDDPDKNTVLKWDMKPTIVTVPRQAFA 181
           LDPLTKEE   VQT+VQ+KYP S NR+AFHYIGLDDP+K+ VL+++  PT+V++PR+ F 
Sbjct: 5   LDPLTKEEFLAVQTIVQNKYPISNNRLAFHYIGLDDPEKDHVLRYETHPTLVSIPRKIFV 64

Query: 182 AVIINSQIHEIVIDLRAKRILSDNVYKGHGFPILSVEEQGVAIELPLK 325
             IINSQ HEI+I+LR + I+SDN++ G+GFPILSV+EQ +AI+LPLK
Sbjct: 65  VAIINSQTHEILINLRIRSIVSDNIHNGYGFPILSVDEQSLAIKLPLK 112


Top