BLASTX nr result

ID: Glycyrrhiza24_contig00027527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027527
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616296.1| DNA repair protein complementing XP-C cells-...   182   3e-44
ref|XP_003544368.1| PREDICTED: uncharacterized protein LOC100818...   177   6e-43
ref|XP_004155756.1| PREDICTED: DNA repair protein complementing ...   132   2e-29
ref|XP_004140360.1| PREDICTED: DNA repair protein complementing ...   132   2e-29
ref|XP_002531915.1| DNA repair protein xp-C / rad4, putative [Ri...   132   3e-29

>ref|XP_003616296.1| DNA repair protein complementing XP-C cells-like protein [Medicago
            truncatula] gi|355517631|gb|AES99254.1| DNA repair
            protein complementing XP-C cells-like protein [Medicago
            truncatula]
          Length = 1052

 Score =  182 bits (461), Expect = 3e-44
 Identities = 82/95 (86%), Positives = 89/95 (93%)
 Frame = +1

Query: 1    PRTCVQTVKTRERWLREGLQVKPNEHPVKELQRSLKPQKGQDFEAEDYGCAADSKEDIKL 180
            PRTCVQTV T+ERWLREGLQVKPNEHP KEL+RS+KPQK QDFEA+DY C  DSKE+IKL
Sbjct: 770  PRTCVQTVMTKERWLREGLQVKPNEHPAKELKRSIKPQKVQDFEADDYDCTTDSKENIKL 829

Query: 181  YGQWQLEPLNLPHAVNGIVPKNDRGQVDVWSEKCL 285
            YG+WQLEPLNLPHAVNGIVPKN+RGQVDVWSEKCL
Sbjct: 830  YGKWQLEPLNLPHAVNGIVPKNERGQVDVWSEKCL 864


>ref|XP_003544368.1| PREDICTED: uncharacterized protein LOC100818100 [Glycine max]
          Length = 926

 Score =  177 bits (450), Expect = 6e-43
 Identities = 83/95 (87%), Positives = 89/95 (93%)
 Frame = +1

Query: 1   PRTCVQTVKTRERWLREGLQVKPNEHPVKELQRSLKPQKGQDFEAEDYGCAADSKEDIKL 180
           PRTCVQTVKT+ERWLREGLQVKPNEHPVK+LQRS+KPQK QD EA+DYGC  DS E IKL
Sbjct: 644 PRTCVQTVKTKERWLREGLQVKPNEHPVKDLQRSMKPQKVQDSEADDYGC-TDSIEQIKL 702

Query: 181 YGQWQLEPLNLPHAVNGIVPKNDRGQVDVWSEKCL 285
           YG+WQLEPLNLPHAVNGIVPKN+RGQVDVWSEKCL
Sbjct: 703 YGKWQLEPLNLPHAVNGIVPKNERGQVDVWSEKCL 737


>ref|XP_004155756.1| PREDICTED: DNA repair protein complementing XP-C cells-like
           [Cucumis sativus]
          Length = 923

 Score =  132 bits (333), Expect = 2e-29
 Identities = 64/95 (67%), Positives = 77/95 (81%)
 Frame = +1

Query: 1   PRTCVQTVKTRERWLREGLQVKPNEHPVKELQRSLKPQKGQDFEAEDYGCAADSKEDIKL 180
           PRTCVQ +KT+ +WLREGLQV+ NE PVKEL+RS+K  K  + EA+D+    DS+  I L
Sbjct: 643 PRTCVQVLKTKHKWLREGLQVRSNELPVKELKRSIKKIKILESEADDFD-QGDSQGTIPL 701

Query: 181 YGQWQLEPLNLPHAVNGIVPKNDRGQVDVWSEKCL 285
           YG+WQLEPL LP AV+GIVPKN+RGQVDVWSEKCL
Sbjct: 702 YGKWQLEPLQLPRAVDGIVPKNERGQVDVWSEKCL 736


>ref|XP_004140360.1| PREDICTED: DNA repair protein complementing XP-C cells-like
           [Cucumis sativus]
          Length = 923

 Score =  132 bits (333), Expect = 2e-29
 Identities = 64/95 (67%), Positives = 77/95 (81%)
 Frame = +1

Query: 1   PRTCVQTVKTRERWLREGLQVKPNEHPVKELQRSLKPQKGQDFEAEDYGCAADSKEDIKL 180
           PRTCVQ +KT+ +WLREGLQV+ NE PVKEL+RS+K  K  + EA+D+    DS+  I L
Sbjct: 643 PRTCVQVLKTKHKWLREGLQVRSNELPVKELKRSIKKIKILESEADDFD-QGDSQGTIPL 701

Query: 181 YGQWQLEPLNLPHAVNGIVPKNDRGQVDVWSEKCL 285
           YG+WQLEPL LP AV+GIVPKN+RGQVDVWSEKCL
Sbjct: 702 YGKWQLEPLQLPRAVDGIVPKNERGQVDVWSEKCL 736


>ref|XP_002531915.1| DNA repair protein xp-C / rad4, putative [Ricinus communis]
           gi|223528425|gb|EEF30459.1| DNA repair protein xp-C /
           rad4, putative [Ricinus communis]
          Length = 683

 Score =  132 bits (332), Expect = 3e-29
 Identities = 63/95 (66%), Positives = 74/95 (77%)
 Frame = +1

Query: 1   PRTCVQTVKTRERWLREGLQVKPNEHPVKELQRSLKPQKGQDFEAEDYGCAADSKEDIKL 180
           PR CVQT+KT  RWLREGLQ+K NE P K L++S   +K +  E +DY    D K +I+L
Sbjct: 512 PRACVQTLKTEHRWLREGLQIKANECPTKVLKQSANLKKVKSSEDDDYS-EVDPKGNIEL 570

Query: 181 YGQWQLEPLNLPHAVNGIVPKNDRGQVDVWSEKCL 285
           YG+WQLEPL LPHAVNGIVPKN+RGQVDVWSEKCL
Sbjct: 571 YGKWQLEPLQLPHAVNGIVPKNERGQVDVWSEKCL 605


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