BLASTX nr result

ID: Glycyrrhiza24_contig00027493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027493
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518163.1| PREDICTED: uncharacterized protein LOC100785...   155   4e-36
ref|XP_003548045.1| PREDICTED: uncharacterized protein LOC100812...   148   4e-34
ref|XP_003548928.1| PREDICTED: uncharacterized protein LOC100785...   144   6e-33
ref|XP_003624562.1| INO80 complex subunit D [Medicago truncatula...   119   3e-25
ref|XP_002514791.1| conserved hypothetical protein [Ricinus comm...    91   7e-17

>ref|XP_003518163.1| PREDICTED: uncharacterized protein LOC100785208 [Glycine max]
           gi|356502267|ref|XP_003519941.1| PREDICTED:
           uncharacterized protein LOC100782023 [Glycine max]
          Length = 233

 Score =  155 bits (391), Expect = 4e-36
 Identities = 72/99 (72%), Positives = 83/99 (83%)
 Frame = -3

Query: 476 KLYRGCTTVTKNLPTGPSFCNKPILSSTVPPACPTHYQLGERCLVRAIRRAGVGNAIPPI 297
           KLY+GC  V KNLPTGPSFCNKP+L S VPPACP+H+Q GERCL RA+RRAG+G AI   
Sbjct: 131 KLYQGCKAVAKNLPTGPSFCNKPVLRSMVPPACPSHFQFGERCLARALRRAGLGTAIATT 190

Query: 296 RKPNLKLHVIASEFVRQIQSRRKLALKETVSNAKTE*ET 180
           RKPN+KLHVIASEFVRQIQ++RKLALK+T    +TE ET
Sbjct: 191 RKPNVKLHVIASEFVRQIQNKRKLALKKTAPKVETEQET 229


>ref|XP_003548045.1| PREDICTED: uncharacterized protein LOC100812807 [Glycine max]
          Length = 228

 Score =  148 bits (374), Expect = 4e-34
 Identities = 70/96 (72%), Positives = 79/96 (82%)
 Frame = -3

Query: 476 KLYRGCTTVTKNLPTGPSFCNKPILSSTVPPACPTHYQLGERCLVRAIRRAGVGNAIPPI 297
           KLY+GC  V KNLPTGPSFCNKPIL S VPPACP+H+Q GERCL RA+RRAG+G AI   
Sbjct: 133 KLYQGCKAVAKNLPTGPSFCNKPILRSMVPPACPSHFQFGERCLARALRRAGLGTAIATT 192

Query: 296 RKPNLKLHVIASEFVRQIQSRRKLALKETVSNAKTE 189
           RKPN KLHVI SEFVRQIQ++RKLALK+T    +TE
Sbjct: 193 RKPNGKLHVITSEFVRQIQNKRKLALKKTDPKVETE 228


>ref|XP_003548928.1| PREDICTED: uncharacterized protein LOC100785019 [Glycine max]
          Length = 263

 Score =  144 bits (364), Expect = 6e-33
 Identities = 68/96 (70%), Positives = 77/96 (80%)
 Frame = -3

Query: 476 KLYRGCTTVTKNLPTGPSFCNKPILSSTVPPACPTHYQLGERCLVRAIRRAGVGNAIPPI 297
           KLYRGC  V KNLPTGPSFCNKPIL S VPPACP+H+Q GERCL RA+RRAG+G AI   
Sbjct: 168 KLYRGCKAVAKNLPTGPSFCNKPILRSMVPPACPSHFQFGERCLARALRRAGLGTAIATT 227

Query: 296 RKPNLKLHVIASEFVRQIQSRRKLALKETVSNAKTE 189
           RKPN+KL VI  EFV QIQ++RKLALK+T    +TE
Sbjct: 228 RKPNVKLRVITFEFVCQIQNKRKLALKKTAPKVETE 263


>ref|XP_003624562.1| INO80 complex subunit D [Medicago truncatula]
           gi|355499577|gb|AES80780.1| INO80 complex subunit D
           [Medicago truncatula]
          Length = 233

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/96 (58%), Positives = 71/96 (73%)
 Frame = -3

Query: 476 KLYRGCTTVTKNLPTGPSFCNKPILSSTVPPACPTHYQLGERCLVRAIRRAGVGNAIPPI 297
           KLYRGCT V K+LPTGP FCNKP+L S VP  CP HYQLGE+CL+RA++RA  G+ +P  
Sbjct: 138 KLYRGCTAVAKSLPTGPVFCNKPVLRSMVPLVCPAHYQLGEKCLLRAVKRA--GHNVPVN 195

Query: 296 RKPNLKLHVIASEFVRQIQSRRKLALKETVSNAKTE 189
            KP+ +LH++  EFVRQIQ++RK A K  +   K E
Sbjct: 196 GKPSPQLHLLIPEFVRQIQNKRKAARKAALPKPKPE 231


>ref|XP_002514791.1| conserved hypothetical protein [Ricinus communis]
           gi|223545842|gb|EEF47345.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 245

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 48/98 (48%), Positives = 60/98 (61%)
 Frame = -3

Query: 476 KLYRGCTTVTKNLPTGPSFCNKPILSSTVPPACPTHYQLGERCLVRAIRRAGVGNAIPPI 297
           KLY+GCT V K+ P     C KPIL STVP  CPTH+Q  E    RA+R+AG+  + P  
Sbjct: 147 KLYKGCTFVIKSAPARHLLCGKPILRSTVPALCPTHFQKAEIYAARALRKAGLNVSSPSK 206

Query: 296 RKPNLKLHVIASEFVRQIQSRRKLALKETVSNAKTE*E 183
             P  K HVI  EFVRQIQ++R+ A KE  +  +T  E
Sbjct: 207 VAP--KFHVIVREFVRQIQTKRRAAHKENAAKVQTNEE 242


Top