BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027490
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613802.1| S-like ribonuclease [Medicago truncatula] gi...    78   6e-13
gb|ABE80156.1| Ribonuclease H [Medicago truncatula]                    77   2e-12
gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptas...    73   3e-11
gb|ABD32401.2| Ribonuclease H [Medicago truncatula]                    72   4e-11
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    71   8e-11

>ref|XP_003613802.1| S-like ribonuclease [Medicago truncatula]
           gi|355515137|gb|AES96760.1| S-like ribonuclease
           [Medicago truncatula]
          Length = 552

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 39/103 (37%), Positives = 52/103 (50%)
 Frame = -3

Query: 314 FFQETDALNWLNLGATGPKDTLFIAGVWWSWKFRNAKCFNDDNIPFPRLHLSVLNLAETF 135
           FF+     +WL  G  G     F+A VWW+W+ RN  C +  N    RL  ++  + ETF
Sbjct: 309 FFECLVPHDWLKDGLLGAHSFTFVAIVWWAWRHRNIMCLSHGNWSLNRLVFNIQGMIETF 368

Query: 134 KVCYKKDHTSSNPARQISWYERDREGVILNVDGSSLGNPGPAG 6
           K C+  +       R I W   +   VILNVDGS LG+P  AG
Sbjct: 369 KNCFSVNRNGVIEERFIKWNNNNHSCVILNVDGSCLGSPSRAG 411


>gb|ABE80156.1| Ribonuclease H [Medicago truncatula]
          Length = 438

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 33/103 (32%), Positives = 53/103 (51%)
 Frame = -3

Query: 314 FFQETDALNWLNLGATGPKDTLFIAGVWWSWKFRNAKCFNDDNIPFPRLHLSVLNLAETF 135
           FF  T A +W  +G +     +F  G+WW+W+ RN  C N++ +   RL  ++++ A   
Sbjct: 195 FFTATSAHDWFKIGMSSSLPDIFFGGLWWAWRHRNLMCLNNETMSLFRLCNNIVSAATYI 254

Query: 134 KVCYKKDHTSSNPARQISWYERDREGVILNVDGSSLGNPGPAG 6
           K  +  +   ++  R + W  R+    ILNVDGS LG P   G
Sbjct: 255 KSAFDSEENVNHSDRFVKWNNRNHHDHILNVDGSCLGTPSRTG 297


>gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 869

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/103 (33%), Positives = 52/103 (50%)
 Frame = -3

Query: 314 FFQETDALNWLNLGATGPKDTLFIAGVWWSWKFRNAKCFNDDNIPFPRLHLSVLNLAETF 135
           FF  TD   W   G  G K  LF AG+WW W+ RNA+C +++++   RL  ++    +  
Sbjct: 626 FFAVTDIEIWCKSGLIGSKAILFAAGLWWIWRSRNARCMSEESMLLQRLAANITYFVDDI 685

Query: 134 KVCYKKDHTSSNPARQISWYERDREGVILNVDGSSLGNPGPAG 6
             C+ +        R + W   +    ILNVDGS +G+P  AG
Sbjct: 686 NSCFFQPLPVMVSDRYVKWNNSNFNCTILNVDGSCIGSPIRAG 728


>gb|ABD32401.2| Ribonuclease H [Medicago truncatula]
          Length = 233

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 29/91 (31%), Positives = 51/91 (56%)
 Frame = -3

Query: 278 LGATGPKDTLFIAGVWWSWKFRNAKCFNDDNIPFPRLHLSVLNLAETFKVCYKKDHTSSN 99
           LG +G + ++F+AG+WW W+ RN  C N++ +   RL  ++++ A+     +  +    +
Sbjct: 2   LGISGSRSSIFLAGLWWVWRHRNLMCLNNETLSLFRLCNNIISAADAANSAFNGEENPPH 61

Query: 98  PARQISWYERDREGVILNVDGSSLGNPGPAG 6
             R + W  R+ +  ILNVDGS +G P   G
Sbjct: 62  SDRLVKWNNRNHQDFILNVDGSCIGTPPRTG 92


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 1296

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
 Frame = -3

Query: 314  FFQETDALNWLNLGATGPKDTLFIAGVWWSWKFRNAKCFNDDNIPFPRLHLSVLNLAETF 135
            FF  +   +W+   ++G +   F+AG+WWSW+ RN  C +++  P  R+   + +     
Sbjct: 1052 FFSVSSVQDWIRNFSSGSRAITFLAGLWWSWRHRNLMCLSNETWPLTRISFRINDSINAI 1111

Query: 134  KVCYKKDHT-SSNPARQISWYERDREGVILNVDGSSLGNPGPAG 6
            +  + K +    + AR + W + + +  ILNVDGS LG P  AG
Sbjct: 1112 RSAFVKSNVIQPDSARMVKWNQGNHQCHILNVDGSCLGTPIRAG 1155