BLASTX nr result

ID: Glycyrrhiza24_contig00027470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027470
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540522.1| PREDICTED: DNA repair protein rhp54-like [Gl...   236   2e-60
ref|XP_003541607.1| PREDICTED: DNA repair and recombination prot...   233   2e-59
emb|CBI38030.3| unnamed protein product [Vitis vinifera]              213   2e-53
ref|XP_002273814.1| PREDICTED: DNA repair and recombination prot...   213   2e-53
emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera]   213   2e-53

>ref|XP_003540522.1| PREDICTED: DNA repair protein rhp54-like [Glycine max]
          Length = 883

 Score =  236 bits (601), Expect = 2e-60
 Identities = 115/123 (93%), Positives = 120/123 (97%)
 Frame = -2

Query: 369  KDGVKSKFFLTMLNLCESAGEKLLVFSQYLLPLKYLERLSMKWKGWSLGREIFVISGESS 190
            +DGVKSKF+  MLNLCESAGEKLLVFSQYLLPLKYLERL+MKWKGWSLGREIFVISGESS
Sbjct: 686  RDGVKSKFYYNMLNLCESAGEKLLVFSQYLLPLKYLERLTMKWKGWSLGREIFVISGESS 745

Query: 189  SEQREWSMENFNNSPDAKVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFR 10
            SEQREWSME FNNSPDA+VFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFR
Sbjct: 746  SEQREWSMEKFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFR 805

Query: 9    PGR 1
            PG+
Sbjct: 806  PGQ 808


>ref|XP_003541607.1| PREDICTED: DNA repair and recombination protein RDH54-like [Glycine
            max]
          Length = 1001

 Score =  233 bits (593), Expect = 2e-59
 Identities = 114/123 (92%), Positives = 119/123 (96%)
 Frame = -2

Query: 369  KDGVKSKFFLTMLNLCESAGEKLLVFSQYLLPLKYLERLSMKWKGWSLGREIFVISGESS 190
            +DGVKSKFFL MLNLCESAGEKLLVFSQYLLPLKYLERL+MKWKGWSL REIFVISGE+S
Sbjct: 787  RDGVKSKFFLNMLNLCESAGEKLLVFSQYLLPLKYLERLTMKWKGWSLKREIFVISGETS 846

Query: 189  SEQREWSMENFNNSPDAKVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFR 10
            SE REWSME FNNSPD+KVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFR
Sbjct: 847  SEDREWSMERFNNSPDSKVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFR 906

Query: 9    PGR 1
            PG+
Sbjct: 907  PGQ 909


>emb|CBI38030.3| unnamed protein product [Vitis vinifera]
          Length = 856

 Score =  213 bits (541), Expect = 2e-53
 Identities = 102/123 (82%), Positives = 116/123 (94%)
 Frame = -2

Query: 369  KDGVKSKFFLTMLNLCESAGEKLLVFSQYLLPLKYLERLSMKWKGWSLGREIFVISGESS 190
            +DGVK+KFFL +L LC+S+GEKLLVFSQYLLPL++LE+L+MK KGWS G+EIF ISGESS
Sbjct: 653  RDGVKAKFFLNVLALCQSSGEKLLVFSQYLLPLRFLEKLTMKVKGWSPGKEIFAISGESS 712

Query: 189  SEQREWSMENFNNSPDAKVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFR 10
            SEQREWSME FN SPDA+VFFGSIKACGEGISLVGASR++ILDVHLNPSVTRQAIGRAFR
Sbjct: 713  SEQREWSMERFNTSPDARVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFR 772

Query: 9    PGR 1
            PG+
Sbjct: 773  PGQ 775


>ref|XP_002273814.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
            vinifera]
          Length = 903

 Score =  213 bits (541), Expect = 2e-53
 Identities = 102/123 (82%), Positives = 116/123 (94%)
 Frame = -2

Query: 369  KDGVKSKFFLTMLNLCESAGEKLLVFSQYLLPLKYLERLSMKWKGWSLGREIFVISGESS 190
            +DGVK+KFFL +L LC+S+GEKLLVFSQYLLPL++LE+L+MK KGWS G+EIF ISGESS
Sbjct: 706  RDGVKAKFFLNVLALCQSSGEKLLVFSQYLLPLRFLEKLTMKVKGWSPGKEIFAISGESS 765

Query: 189  SEQREWSMENFNNSPDAKVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFR 10
            SEQREWSME FN SPDA+VFFGSIKACGEGISLVGASR++ILDVHLNPSVTRQAIGRAFR
Sbjct: 766  SEQREWSMERFNTSPDARVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFR 825

Query: 9    PGR 1
            PG+
Sbjct: 826  PGQ 828


>emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera]
          Length = 1187

 Score =  213 bits (541), Expect = 2e-53
 Identities = 102/123 (82%), Positives = 116/123 (94%)
 Frame = -2

Query: 369  KDGVKSKFFLTMLNLCESAGEKLLVFSQYLLPLKYLERLSMKWKGWSLGREIFVISGESS 190
            +DGVK+KFFL +L LC+S+GEKLLVFSQYLLPL++LE+L+MK KGWS G+EIF ISGESS
Sbjct: 932  RDGVKAKFFLNVLALCQSSGEKLLVFSQYLLPLRFLEKLTMKVKGWSPGKEIFAISGESS 991

Query: 189  SEQREWSMENFNNSPDAKVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFR 10
            SEQREWSME FN SPDA+VFFGSIKACGEGISLVGASR++ILDVHLNPSVTRQAIGRAFR
Sbjct: 992  SEQREWSMERFNTSPDARVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFR 1051

Query: 9    PGR 1
            PG+
Sbjct: 1052 PGQ 1054


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