BLASTX nr result

ID: Glycyrrhiza24_contig00027458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027458
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520836.1| PREDICTED: trihelix transcription factor GTL...    74   1e-11
ref|XP_003554701.1| PREDICTED: uncharacterized protein LOC100801...    67   2e-09
ref|XP_003556463.1| PREDICTED: trihelix transcription factor GTL...    66   3e-09
ref|XP_002512226.1| transcription factor, putative [Ricinus comm...    65   7e-09
ref|XP_002272789.2| PREDICTED: trihelix transcription factor GTL...    63   3e-08

>ref|XP_003520836.1| PREDICTED: trihelix transcription factor GTL2-like [Glycine max]
          Length = 586

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 41/76 (53%), Positives = 47/76 (61%)
 Frame = +2

Query: 2   INKYFRKTKDNNNVNRRKRSLDSRTCPYFHQLTSLYNTTHHGNQLAAAAAPQSHIQSPVN 181
           INKYFRKTKDN N   +KRSL+SRTCPYFHQL+ LY              PQS  +   N
Sbjct: 501 INKYFRKTKDNVN---KKRSLNSRTCPYFHQLSCLYG--------QGKIVPQSDEREGKN 549

Query: 182 HCDSTAISGQIVPPDH 229
           + + TA SG  VPPDH
Sbjct: 550 YLNPTANSGDQVPPDH 565


>ref|XP_003554701.1| PREDICTED: uncharacterized protein LOC100801868 [Glycine max]
          Length = 564

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/78 (51%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
 Frame = +2

Query: 2   INKYFRKTKDNNNVNRRKRSLDSRTCPYFHQLTSLYNTTHHGNQLAAAAAPQSHIQSPVN 181
           INKYFRKTKDN N   +KRSL+SRTCPYFHQL+ LY              PQS  +   N
Sbjct: 480 INKYFRKTKDNVN---KKRSLNSRTCPYFHQLSCLYG--------QGKIVPQSEREG--N 526

Query: 182 HC-DSTAISGQIVPPDHH 232
           +C + T  SGQ+ P D H
Sbjct: 527 YCLNPTPNSGQVPPDDDH 544


>ref|XP_003556463.1| PREDICTED: trihelix transcription factor GTL2-like [Glycine max]
          Length = 590

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/60 (60%), Positives = 40/60 (66%)
 Frame = +2

Query: 2   INKYFRKTKDNNNVNRRKRSLDSRTCPYFHQLTSLYNTTHHGNQLAAAAAPQSHIQSPVN 181
           INKYFRKTKD N    +KRSLDSRTCPYFHQL+SLY      NQ       +SH+ SP N
Sbjct: 488 INKYFRKTKDVN----KKRSLDSRTCPYFHQLSSLY------NQGKPVLQSESHLNSPPN 537


>ref|XP_002512226.1| transcription factor, putative [Ricinus communis]
           gi|223548187|gb|EEF49678.1| transcription factor,
           putative [Ricinus communis]
          Length = 634

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 7/67 (10%)
 Frame = +2

Query: 2   INKYFRKTKDNNNVNRRKRSLDSRTCPYFHQLTSLYN-------TTHHGNQLAAAAAPQS 160
           INKYFRKTKD N    +KRS+DSRTCPYFHQL++LYN           G +   +A P++
Sbjct: 541 INKYFRKTKDVN----KKRSVDSRTCPYFHQLSTLYNQGTLAAPPLEAGKERPQSALPEN 596

Query: 161 HIQSPVN 181
           H  S +N
Sbjct: 597 HTASKLN 603


>ref|XP_002272789.2| PREDICTED: trihelix transcription factor GTL2-like [Vitis vinifera]
          Length = 615

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/61 (54%), Positives = 42/61 (68%)
 Frame = +2

Query: 2   INKYFRKTKDNNNVNRRKRSLDSRTCPYFHQLTSLYNTTHHGNQLAAAAAPQSHIQSPVN 181
           INKYFRKTKD +    +KRSLDSRTCPYFHQL++LY+        + A AP++ + S  N
Sbjct: 522 INKYFRKTKDVS----KKRSLDSRTCPYFHQLSTLYSQGTLVVPSSEAPAPENCLNSSEN 577

Query: 182 H 184
           H
Sbjct: 578 H 578


Top