BLASTX nr result

ID: Glycyrrhiza24_contig00027439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027439
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541539.1| PREDICTED: uncharacterized protein LOC100793...   203   1e-50
emb|CBI14793.3| unnamed protein product [Vitis vinifera]              193   1e-47
ref|XP_002519035.1| conserved hypothetical protein [Ricinus comm...   192   2e-47
ref|XP_003637386.1| hypothetical protein MTR_084s0009 [Medicago ...   187   6e-46
ref|XP_004158063.1| PREDICTED: mediator of RNA polymerase II tra...   183   1e-44

>ref|XP_003541539.1| PREDICTED: uncharacterized protein LOC100793949 [Glycine max]
          Length = 1244

 Score =  203 bits (516), Expect = 1e-50
 Identities = 105/153 (68%), Positives = 117/153 (76%), Gaps = 9/153 (5%)
 Frame = +1

Query: 46  MNQIAGTKEPEEDRERVLCETQGEEVSKGSEKNEAVTVTV-----SGEQE----EKPPVV 198
           MNQI GTK+PE +        Q ++  K S+K ++ T  V     S EQE    EKPP  
Sbjct: 1   MNQIGGTKDPEAEPVSPSLP-QPQDTPKSSDKTDSATAVVVVAAASEEQEVGEEEKPPPP 59

Query: 199 DDPMEQDSVTPATVFRIRLRQPTSNLLHKMSVPEICRNFSAVSWCGKLNSIACASETCAR 378
             PME+D V PATVF IRL+QP SNLLHKMSVPE+CRNFSAVSWCGKLN+IACA+ETCAR
Sbjct: 60  PVPMEEDPVNPATVFSIRLKQPRSNLLHKMSVPELCRNFSAVSWCGKLNAIACAAETCAR 119

Query: 379 IPSSTANPPFWIPIHIVIPERPTECAVFNVIAD 477
           IPSSTANPPFWIPIHIVIPERPTECAVFNVIAD
Sbjct: 120 IPSSTANPPFWIPIHIVIPERPTECAVFNVIAD 152


>emb|CBI14793.3| unnamed protein product [Vitis vinifera]
          Length = 513

 Score =  193 bits (491), Expect = 1e-47
 Identities = 101/150 (67%), Positives = 117/150 (78%), Gaps = 6/150 (4%)
 Frame = +1

Query: 46  MNQIAGTKEPEEDRERVLCETQGEEVSKGSEKNEAVTVTVS-GEQEEKPPVV-----DDP 207
           M+  +G K+ E++        Q  EV+KG EK+E V+V    GEQEE+   V     DDP
Sbjct: 1   MSPGSGAKDSEDEPV-----PQALEVAKGLEKSEVVSVDEEEGEQEEEGEQVVEKTADDP 55

Query: 208 MEQDSVTPATVFRIRLRQPTSNLLHKMSVPEICRNFSAVSWCGKLNSIACASETCARIPS 387
           ME+DSV PATVF IRL+QP SNL HKMSVPE+CRNFSAV+WCGKLN+IACASETCARIPS
Sbjct: 56  MEEDSVNPATVFCIRLKQPRSNLQHKMSVPELCRNFSAVAWCGKLNAIACASETCARIPS 115

Query: 388 STANPPFWIPIHIVIPERPTECAVFNVIAD 477
           S ANPPFWIPIHIVIPERPTEC+VF+VIAD
Sbjct: 116 SNANPPFWIPIHIVIPERPTECSVFSVIAD 145


>ref|XP_002519035.1| conserved hypothetical protein [Ricinus communis]
           gi|223541698|gb|EEF43246.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1255

 Score =  192 bits (489), Expect = 2e-47
 Identities = 99/141 (70%), Positives = 112/141 (79%), Gaps = 2/141 (1%)
 Frame = +1

Query: 61  GTKEPEEDRERVLCETQGEEVSKGSEKNEAVTVTVSGEQE--EKPPVVDDPMEQDSVTPA 234
           G KEPEE+      E     V+KG+  ++     VS E++  EKP   DDPME+DSV+PA
Sbjct: 18  GNKEPEEESVGQSLEI----VAKGAGSDKPAGEPVSSEEDSVEKP---DDPMEEDSVSPA 70

Query: 235 TVFRIRLRQPTSNLLHKMSVPEICRNFSAVSWCGKLNSIACASETCARIPSSTANPPFWI 414
           TVF IRL+QP SNL HKMSVPE+CRNFSAV+WCGKLN+IACASETCARIPSS ANPPFWI
Sbjct: 71  TVFCIRLKQPRSNLQHKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWI 130

Query: 415 PIHIVIPERPTECAVFNVIAD 477
           PIHIVIPERPTECAVFNVIAD
Sbjct: 131 PIHIVIPERPTECAVFNVIAD 151


>ref|XP_003637386.1| hypothetical protein MTR_084s0009 [Medicago truncatula]
           gi|355503321|gb|AES84524.1| hypothetical protein
           MTR_084s0009 [Medicago truncatula]
          Length = 1245

 Score =  187 bits (476), Expect = 6e-46
 Identities = 97/151 (64%), Positives = 114/151 (75%), Gaps = 7/151 (4%)
 Frame = +1

Query: 46  MNQIAGTKEPEEDRERVLCETQGEEVSKGSEK---NEAVTVTVSGE----QEEKPPVVDD 204
           MNQ   TK+ E+         Q +++  G+     N++V+V    E    +E K P+ D 
Sbjct: 1   MNQ---TKDSEQTEPLAHSMPQSQDLPNGTASDNINDSVSVVEDQEVVVAEENKSPI-DQ 56

Query: 205 PMEQDSVTPATVFRIRLRQPTSNLLHKMSVPEICRNFSAVSWCGKLNSIACASETCARIP 384
           PME+DSV PATVF IRLRQ  +NL+HKMSVPE+CRNFSAVSWCGKLN+IACA+ETCARIP
Sbjct: 57  PMEEDSVNPATVFTIRLRQSKANLMHKMSVPELCRNFSAVSWCGKLNAIACAAETCARIP 116

Query: 385 SSTANPPFWIPIHIVIPERPTECAVFNVIAD 477
           SSTANPPFWIPIHIVIPERPTECAVFNVIAD
Sbjct: 117 SSTANPPFWIPIHIVIPERPTECAVFNVIAD 147


>ref|XP_004158063.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           16-like, partial [Cucumis sativus]
          Length = 133

 Score =  183 bits (465), Expect = 1e-44
 Identities = 94/143 (65%), Positives = 107/143 (74%)
 Frame = +1

Query: 46  MNQIAGTKEPEEDRERVLCETQGEEVSKGSEKNEAVTVTVSGEQEEKPPVVDDPMEQDSV 225
           M Q++   E EE  +      Q  E+ K S+K E +       QEE     DD M++D V
Sbjct: 1   MTQVSNATEGEEQPQ-----VQPLELPKVSDKTEPLPA-----QEEVMEKPDDAMDEDLV 50

Query: 226 TPATVFRIRLRQPTSNLLHKMSVPEICRNFSAVSWCGKLNSIACASETCARIPSSTANPP 405
           TPATVFRI+L+QP SNL HKMSVPE+CRNFSAV+WCGKLN+IACASETCARIPSS ANPP
Sbjct: 51  TPATVFRIKLKQPRSNLQHKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPP 110

Query: 406 FWIPIHIVIPERPTECAVFNVIA 474
           FWIPIHIVIPERPTECAVFNVIA
Sbjct: 111 FWIPIHIVIPERPTECAVFNVIA 133


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