BLASTX nr result

ID: Glycyrrhiza24_contig00027416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027416
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608543.1| hypothetical protein MTR_4g097260 [Medicago ...    97   3e-18
ref|XP_002525295.1| conserved hypothetical protein [Ricinus comm...    87   3e-15
ref|XP_003608542.1| hypothetical protein MTR_4g097250 [Medicago ...    73   4e-11

>ref|XP_003608543.1| hypothetical protein MTR_4g097260 [Medicago truncatula]
           gi|355509598|gb|AES90740.1| hypothetical protein
           MTR_4g097260 [Medicago truncatula]
          Length = 140

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 67/124 (54%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
 Frame = -3

Query: 568 KMRKQKGSKVGRYMKAPLRLLMKARDMYVQRMIQCSRSPNFAYVD-AASGCPTGHIIYSL 392
           K  K KGSK+ RYMKAPLR L+K +DMYV  MIQCSR  +FAYVD A  GCPT   +YS 
Sbjct: 3   KKDKSKGSKLTRYMKAPLRFLVKLKDMYVNGMIQCSR--DFAYVDHATMGCPTQ--LYSF 58

Query: 391 PXXXXXXXXXXXXXXXXXXFKELVRAASLRISHHGXXXXXXXXXXXXNVPRSRSVGIGRI 212
           P                  FKELVRAASLRI                 VPRSRSVGIGRI
Sbjct: 59  P--RSFSVNSTTSTISDDDFKELVRAASLRIRDEN---CVKLGSKAMKVPRSRSVGIGRI 113

Query: 211 EEDE 200
           EEDE
Sbjct: 114 EEDE 117


>ref|XP_002525295.1| conserved hypothetical protein [Ricinus communis]
           gi|223535453|gb|EEF37123.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 164

 Score = 87.0 bits (214), Expect = 3e-15
 Identities = 57/159 (35%), Positives = 84/159 (52%), Gaps = 10/159 (6%)
 Frame = -3

Query: 577 LAIKMRKQKGSKVGRYMKAPLRLLMKARDMYVQRMIQCSRSPNFAYVDAASGCPTGHIIY 398
           +A K    K SK+ +++K+PLR+L+KARD YV+ M + S    +       GCPTGH++ 
Sbjct: 1   MATKKPVNKQSKISKFIKSPLRILLKARDFYVKSMTEYSDRIGYG---TFMGCPTGHVVE 57

Query: 397 SLPXXXXXXXXXXXXXXXXXXFKELVRAASLR----------ISHHGXXXXXXXXXXXXN 248
           +LP                  ++EL+RAAS R          +                +
Sbjct: 58  TLP--KSYSVNSTKSSSRDDDYRELLRAASTRGLSSRNDLGVLQRQQSRKSPNNTRANIS 115

Query: 247 VPRSRSVGIGRIEEDEACEFGDDIIQVKPLIYSRSRSHA 131
           +PRS SVGIGRI+E++AC+  DD I+VK  ++ RSRSHA
Sbjct: 116 MPRSHSVGIGRIDEEKACDNFDD-IKVKTDVFPRSRSHA 153


>ref|XP_003608542.1| hypothetical protein MTR_4g097250 [Medicago truncatula]
           gi|355509597|gb|AES90739.1| hypothetical protein
           MTR_4g097250 [Medicago truncatula]
          Length = 135

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 51/127 (40%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
 Frame = -3

Query: 556 QKGSKVGRYMKAPLRLLMKARDMYVQRMIQCSRSPNFAYVDAASGCPTGHIIYSLPXXXX 377
           ++ SK  +YMKAPLRLL K +D+YV+ MI CS   + A+VDA  G P             
Sbjct: 8   RRESKFAKYMKAPLRLLTKVKDLYVRGMIHCSH--DLAFVDANVGIPNS----------- 54

Query: 376 XXXXXXXXXXXXXXFKELVRAASLRISHHGXXXXXXXXXXXXNVPRSRSVGIGRI-EEDE 200
                         F EL+ AASLRI   G               +S  VG+ RI EEDE
Sbjct: 55  --FSSATPTTNDHDFNELITAASLRIRSGGNGVELDAEAMKKPPQKSHRVGMERIEEEDE 112

Query: 199 ACEFGDD 179
           ACEFGDD
Sbjct: 113 ACEFGDD 119


Top