BLASTX nr result

ID: Glycyrrhiza24_contig00027387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027387
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523733.1| PREDICTED: uncharacterized protein LOC100811...   206   3e-51
ref|XP_003636452.1| EMBYO FLOWERING 1-like protein [Medicago tru...   201   1e-49
ref|XP_003636398.1| EMBYO FLOWERING 1-like protein [Medicago tru...   201   1e-49
gb|AAX33635.1| EMBYO FLOWERING 1-like protein [Pisum sativum]          72   7e-11
ref|XP_002309551.1| predicted protein [Populus trichocarpa] gi|2...    66   4e-09

>ref|XP_003523733.1| PREDICTED: uncharacterized protein LOC100811989 [Glycine max]
          Length = 1255

 Score =  206 bits (524), Expect = 3e-51
 Identities = 99/130 (76%), Positives = 112/130 (86%)
 Frame = +2

Query: 2    RDSGFDGQNSTKFGKKEKMKSSNSTLQNRVSKQLSLPHLETETSLQRKLQVHGIHETSVP 181
            R + F+GQN  K G+KEKMKSSNSTLQN+VSKQ+  P  ETETSLQRKL+V+G HET VP
Sbjct: 1126 RATAFNGQNPMKSGRKEKMKSSNSTLQNKVSKQICWPRNETETSLQRKLEVNGNHETPVP 1185

Query: 182  FKIISGNSCMVNRNPADFTMPETGNIYMIRGEDLKFEKSIPKNKSRFPIPCGHKQHRNLK 361
            +KIISGN+CMVNRNPAD T+PETGNIYMIRGEDLKFEK+ PK + RFPIP G KQ +NLK
Sbjct: 1186 YKIISGNTCMVNRNPADLTIPETGNIYMIRGEDLKFEKNFPKKRPRFPIPYGSKQQKNLK 1245

Query: 362  GTKMKEHSKH 391
            GTKMKEHSKH
Sbjct: 1246 GTKMKEHSKH 1255


>ref|XP_003636452.1| EMBYO FLOWERING 1-like protein [Medicago truncatula]
            gi|355502387|gb|AES83590.1| EMBYO FLOWERING 1-like
            protein [Medicago truncatula]
          Length = 1149

 Score =  201 bits (510), Expect = 1e-49
 Identities = 99/130 (76%), Positives = 108/130 (83%)
 Frame = +2

Query: 2    RDSGFDGQNSTKFGKKEKMKSSNSTLQNRVSKQLSLPHLETETSLQRKLQVHGIHETSVP 181
            +D G + QNSTKFGKKEKMKSSNS LQNR  KQ SL   ETETSLQR+L++HG H TSVP
Sbjct: 1021 KDDGSNAQNSTKFGKKEKMKSSNSLLQNRFVKQCSLSCNETETSLQRRLEIHGTH-TSVP 1079

Query: 182  FKIISGNSCMVNRNPADFTMPETGNIYMIRGEDLKFEKSIPKNKSRFPIPCGHKQHRNLK 361
             K  SG SC VNRNPA+FT+PE GN+YMIRGEDLKFE SIP+NK  FPIPCGHKQ RNLK
Sbjct: 1080 LKTTSGISCTVNRNPAEFTVPEAGNVYMIRGEDLKFEGSIPQNKHLFPIPCGHKQQRNLK 1139

Query: 362  GTKMKEHSKH 391
            GTKMKEHSKH
Sbjct: 1140 GTKMKEHSKH 1149


>ref|XP_003636398.1| EMBYO FLOWERING 1-like protein [Medicago truncatula]
            gi|355502333|gb|AES83536.1| EMBYO FLOWERING 1-like
            protein [Medicago truncatula]
          Length = 1178

 Score =  201 bits (510), Expect = 1e-49
 Identities = 99/130 (76%), Positives = 108/130 (83%)
 Frame = +2

Query: 2    RDSGFDGQNSTKFGKKEKMKSSNSTLQNRVSKQLSLPHLETETSLQRKLQVHGIHETSVP 181
            +D G + QNSTKFGKKEKMKSSNS LQNR  KQ SL   ETETSLQR+L++HG H TSVP
Sbjct: 1050 KDDGSNAQNSTKFGKKEKMKSSNSLLQNRFVKQCSLSCNETETSLQRRLEIHGTH-TSVP 1108

Query: 182  FKIISGNSCMVNRNPADFTMPETGNIYMIRGEDLKFEKSIPKNKSRFPIPCGHKQHRNLK 361
             K  SG SC VNRNPA+FT+PE GN+YMIRGEDLKFE SIP+NK  FPIPCGHKQ RNLK
Sbjct: 1109 LKTTSGISCTVNRNPAEFTVPEAGNVYMIRGEDLKFEGSIPQNKHLFPIPCGHKQQRNLK 1168

Query: 362  GTKMKEHSKH 391
            GTKMKEHSKH
Sbjct: 1169 GTKMKEHSKH 1178


>gb|AAX33635.1| EMBYO FLOWERING 1-like protein [Pisum sativum]
          Length = 506

 Score = 72.0 bits (175), Expect = 7e-11
 Identities = 39/68 (57%), Positives = 48/68 (70%)
 Frame = +2

Query: 2   RDSGFDGQNSTKFGKKEKMKSSNSTLQNRVSKQLSLPHLETETSLQRKLQVHGIHETSVP 181
           +D+G + QNSTKFGKKEKM+SSN+ LQ+R  KQ SL + ET TS Q +L+  G H TSV 
Sbjct: 440 KDAGSNDQNSTKFGKKEKMRSSNAPLQSRFLKQCSLSYNETNTSQQHRLEARGTH-TSVQ 498

Query: 182 FKIISGNS 205
            KI  G S
Sbjct: 499 LKITPGVS 506


>ref|XP_002309551.1| predicted protein [Populus trichocarpa] gi|222855527|gb|EEE93074.1|
            predicted protein [Populus trichocarpa]
          Length = 1309

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 43/95 (45%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
 Frame = +2

Query: 92   SKQLSLPHLETETSLQRKLQVHGIHETSVPFKIISGNS-CMVNRNPADFTMPETGNIYMI 268
            S    LP    E   + KL+    + T    K  S    C VNRNPADFT+PE GN+YMI
Sbjct: 1204 SSMFPLPFRALEKPNKHKLESPANNRTVHAHKSSSETEVCSVNRNPADFTVPEAGNMYMI 1263

Query: 269  RGEDLKFEKSIP-KNKSRFPIPCGHKQHRNLKGTK 370
             GEDLKFEK +P  N SR     G K+ R L   K
Sbjct: 1264 VGEDLKFEKEVPFVNGSRSLKLDGPKRQRKLPAVK 1298


Top