BLASTX nr result

ID: Glycyrrhiza24_contig00027386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027386
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541127.1| PREDICTED: WD repeat-containing protein 44-l...   134   1e-29
ref|XP_003526075.1| PREDICTED: WD repeat-containing protein 44-l...   133   1e-29
ref|XP_003539589.1| PREDICTED: WD repeat-containing protein 44-l...   129   2e-28
ref|XP_002329147.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26
ref|XP_002317512.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26

>ref|XP_003541127.1| PREDICTED: WD repeat-containing protein 44-like [Glycine max]
          Length = 841

 Score =  134 bits (336), Expect = 1e-29
 Identities = 70/118 (59%), Positives = 76/118 (64%)
 Frame = +2

Query: 2   VNMLFLVNGXXXXXXXXXXXXMGDNHPEXXXXXXXXXXXXXLSLDQFVVPETVFALTEKP 181
           +N++FLVNG              DN+ E             LSLDQ VVPETVFALTEKP
Sbjct: 410 LNIMFLVNGSPEPSSPGM-----DNNSEKKRRGRLSVSRKSLSLDQLVVPETVFALTEKP 464

Query: 182 ICSFQGHLHDVLDXXXXXXXXXXXXXMDKTVRLWHLSSKSCLKIFSHSDYVTCIQFNP 355
           +CSF+GHLHDVLD             MDKTVRLWHLSSKSCLKIFSHSDYVTCIQFNP
Sbjct: 465 VCSFKGHLHDVLDLSWSKSQRLLSSSMDKTVRLWHLSSKSCLKIFSHSDYVTCIQFNP 522


>ref|XP_003526075.1| PREDICTED: WD repeat-containing protein 44-like [Glycine max]
          Length = 863

 Score =  133 bits (335), Expect = 1e-29
 Identities = 69/118 (58%), Positives = 76/118 (64%)
 Frame = +2

Query: 2   VNMLFLVNGXXXXXXXXXXXXMGDNHPEXXXXXXXXXXXXXLSLDQFVVPETVFALTEKP 181
           +N++FLVNG              DN+ E             LSLDQ VVPETVFALTEKP
Sbjct: 430 LNIMFLVNGSPEPSSPGM-----DNNSEKKRRGRLSVSRKSLSLDQLVVPETVFALTEKP 484

Query: 182 ICSFQGHLHDVLDXXXXXXXXXXXXXMDKTVRLWHLSSKSCLKIFSHSDYVTCIQFNP 355
           +CSF+GHLHDVLD             MDKTVRLWHLSSKSCLK+FSHSDYVTCIQFNP
Sbjct: 485 VCSFKGHLHDVLDLSWSKSQRLLSSSMDKTVRLWHLSSKSCLKVFSHSDYVTCIQFNP 542


>ref|XP_003539589.1| PREDICTED: WD repeat-containing protein 44-like [Glycine max]
          Length = 766

 Score =  129 bits (325), Expect = 2e-28
 Identities = 61/77 (79%), Positives = 64/77 (83%)
 Frame = +2

Query: 125 LSLDQFVVPETVFALTEKPICSFQGHLHDVLDXXXXXXXXXXXXXMDKTVRLWHLSSKSC 304
           LSLDQFVVP+TVFALT+KP+CSFQGHLHDVLD             MDKTVRLWHLSSKSC
Sbjct: 370 LSLDQFVVPQTVFALTDKPVCSFQGHLHDVLDLSWSKTQHLLSSSMDKTVRLWHLSSKSC 429

Query: 305 LKIFSHSDYVTCIQFNP 355
           LKIFSHSDYVTCIQFNP
Sbjct: 430 LKIFSHSDYVTCIQFNP 446


>ref|XP_002329147.1| predicted protein [Populus trichocarpa] gi|222869816|gb|EEF06947.1|
           predicted protein [Populus trichocarpa]
          Length = 799

 Score =  120 bits (302), Expect = 9e-26
 Identities = 62/118 (52%), Positives = 71/118 (60%)
 Frame = +2

Query: 2   VNMLFLVNGXXXXXXXXXXXXMGDNHPEXXXXXXXXXXXXXLSLDQFVVPETVFALTEKP 181
           +N+L + NG            + D H E             LSLD  ++PETVFALT+KP
Sbjct: 366 LNLLLMANGSPEPNLLSP---LVDTHQEKKRRGRSSISRKSLSLDHIIMPETVFALTDKP 422

Query: 182 ICSFQGHLHDVLDXXXXXXXXXXXXXMDKTVRLWHLSSKSCLKIFSHSDYVTCIQFNP 355
           ICSF+GHL DVLD             MDKTVRLWHLSS +CLKIFSHSDYVTCIQFNP
Sbjct: 423 ICSFEGHLDDVLDLSWSKSQHLLSSSMDKTVRLWHLSSNTCLKIFSHSDYVTCIQFNP 480


>ref|XP_002317512.1| predicted protein [Populus trichocarpa] gi|222860577|gb|EEE98124.1|
           predicted protein [Populus trichocarpa]
          Length = 882

 Score =  120 bits (302), Expect = 9e-26
 Identities = 62/118 (52%), Positives = 72/118 (61%)
 Frame = +2

Query: 2   VNMLFLVNGXXXXXXXXXXXXMGDNHPEXXXXXXXXXXXXXLSLDQFVVPETVFALTEKP 181
           +N+L + NG            + D+H E             LSLD   VPETVF+LT+KP
Sbjct: 450 LNLLLIANGSPEPNLLSP---LVDSHLEKKRRGRSSISRKSLSLDHIFVPETVFSLTDKP 506

Query: 182 ICSFQGHLHDVLDXXXXXXXXXXXXXMDKTVRLWHLSSKSCLKIFSHSDYVTCIQFNP 355
           ICSFQGHL DVLD             MDKTVRLWH+SSK+CLK+FSHSDYVTCIQFNP
Sbjct: 507 ICSFQGHLDDVLDLSWSKSQHLLSSSMDKTVRLWHMSSKTCLKVFSHSDYVTCIQFNP 564


Top