BLASTX nr result

ID: Glycyrrhiza24_contig00027375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027375
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40944.1| unknown [Medicago truncatula]                           82   6e-14
ref|XP_003638735.1| Membrane protein, putative [Medicago truncat...    82   6e-14
ref|XP_003638145.1| Membrane protein, putative [Medicago truncat...    82   6e-14
ref|XP_003551034.1| PREDICTED: uncharacterized membrane protein ...    72   4e-11
ref|NP_195420.2| uncharacterized protein [Arabidopsis thaliana] ...    65   6e-09

>gb|AFK40944.1| unknown [Medicago truncatula]
          Length = 469

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 42/69 (60%), Positives = 46/69 (66%)
 Frame = +3

Query: 3   SYXXXXXXYALFLGAIKGFVVGPIAXXXXXXXXXXXXXXXFPAHVTWTVYTLLKIQVFDA 182
           SY       ALFLGAIKGF+VGPIA               FPAHV WTVYTLLKI++FDA
Sbjct: 15  SYVVFAFFSALFLGAIKGFIVGPIAALILIIGNVGVILGLFPAHVAWTVYTLLKIEIFDA 74

Query: 183 ALKVAVLIA 209
           ALKVA+LIA
Sbjct: 75  ALKVAILIA 83


>ref|XP_003638735.1| Membrane protein, putative [Medicago truncatula]
           gi|355504670|gb|AES85873.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 532

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 42/69 (60%), Positives = 46/69 (66%)
 Frame = +3

Query: 3   SYXXXXXXYALFLGAIKGFVVGPIAXXXXXXXXXXXXXXXFPAHVTWTVYTLLKIQVFDA 182
           SY       ALFLGAIKGF+VGPIA               FPAHV WTVYTLLKI++FDA
Sbjct: 15  SYVVFAFFSALFLGAIKGFIVGPIAALILIIGNVGVILGLFPAHVAWTVYTLLKIEIFDA 74

Query: 183 ALKVAVLIA 209
           ALKVA+LIA
Sbjct: 75  ALKVAILIA 83


>ref|XP_003638145.1| Membrane protein, putative [Medicago truncatula]
           gi|358349418|ref|XP_003638734.1| Membrane protein,
           putative [Medicago truncatula]
           gi|355504080|gb|AES85283.1| Membrane protein, putative
           [Medicago truncatula] gi|355504669|gb|AES85872.1|
           Membrane protein, putative [Medicago truncatula]
          Length = 597

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 42/69 (60%), Positives = 46/69 (66%)
 Frame = +3

Query: 3   SYXXXXXXYALFLGAIKGFVVGPIAXXXXXXXXXXXXXXXFPAHVTWTVYTLLKIQVFDA 182
           SY       ALFLGAIKGF+VGPIA               FPAHV WTVYTLLKI++FDA
Sbjct: 15  SYVVFAFFSALFLGAIKGFIVGPIAALILIIGNVGVILGLFPAHVAWTVYTLLKIEIFDA 74

Query: 183 ALKVAVLIA 209
           ALKVA+LIA
Sbjct: 75  ALKVAILIA 83


>ref|XP_003551034.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Glycine
           max]
          Length = 594

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/68 (52%), Positives = 41/68 (60%)
 Frame = +3

Query: 6   YXXXXXXYALFLGAIKGFVVGPIAXXXXXXXXXXXXXXXFPAHVTWTVYTLLKIQVFDAA 185
           Y      YA FLGA+KG VVGPIA               FPAHV WT+YTLLKI +FDA 
Sbjct: 15  YVVFVFFYAFFLGALKGIVVGPIAALILIIGNVGVILGLFPAHVAWTLYTLLKIHMFDAP 74

Query: 186 LKVAVLIA 209
           +K A+LIA
Sbjct: 75  MKAAILIA 82


>ref|NP_195420.2| uncharacterized protein [Arabidopsis thaliana]
           gi|61742737|gb|AAX55189.1| hypothetical protein
           At4g37030 [Arabidopsis thaliana]
           gi|332661339|gb|AEE86739.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 569

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/69 (47%), Positives = 38/69 (55%)
 Frame = +3

Query: 3   SYXXXXXXYALFLGAIKGFVVGPIAXXXXXXXXXXXXXXXFPAHVTWTVYTLLKIQVFDA 182
           SY       A FLGAIKG +VGPIA               FPAHVTWT+Y + K   FD 
Sbjct: 15  SYVIFAFCSAFFLGAIKGLIVGPIAGLTLIVGNVGVILCLFPAHVTWTIYAVAKTNRFDI 74

Query: 183 ALKVAVLIA 209
            LKVA+L+A
Sbjct: 75  PLKVAILVA 83


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